Re: [R] using dcast with a function of multiple arguments

2015-07-21 Thread Thierry Onkelinx
Here is a solution using dplyr

require(data.table)
dt - as.data.table(mtcars)
library(dplyr)
library(tidyr)
dt %%
  group_by(carb, cyl) %%
  summarise(WM = weighted.mean(x = mpg, w = wt)) %%
  spread(cyl, WM)

Best regards,

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie  Kwaliteitszorg / team Biometrics  Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

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than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
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ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2015-07-20 20:52 GMT+02:00 Bos, Roger roger@rothschild.com:

 I am trying to figure out how to use dcast.data.table with a function with
 multiple arguments.  Here is my reproducible example for a simple function
 of one argument:

 require(data.table)
 dt - as.data.table(mtcars)
 dcast.data.table(dt, carb ~ cyl, value.var='mpg', fun=mean)

 If I instead want to use, say, weighted.mean(x, w), how do I do so?

 The docs say
 ...
 Any other arguments that maybe passed to the aggregating function.

 So I tried:

  dcast.data.table(dt, carb ~ cyl, value.var='mpg', fun=weighted.mean,
 w=wt)
 Error in weighted.mean.default(data[[value.var]][0], ...) :
   'x' and 'w' must have the same length

 The docs also say that value.var can be a list, so I tried that:

  In cases where value.var is a list, the function should be able to handle
 a list input and provide a single value or list of length one as output.

  dcast.data.table(dt, carb ~ cyl, value.var=list('mpg','wt'),
 fun=weighted.mean)
 Error in dcast.data.table(dt, carb ~ cyl, value.var = list(mpg, wt),  :
   'value.var' must be a character vector of length 1.

 I didn't actually expect that to work, but without an example I don't know
 what else to try.  Any hints would be greatly appreciated.

 Thanks,

 Roger



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[R] using dcast with a function of multiple arguments

2015-07-20 Thread Bos, Roger
I am trying to figure out how to use dcast.data.table with a function with 
multiple arguments.  Here is my reproducible example for a simple function of 
one argument:

require(data.table)
dt - as.data.table(mtcars)
dcast.data.table(dt, carb ~ cyl, value.var='mpg', fun=mean)

If I instead want to use, say, weighted.mean(x, w), how do I do so?

The docs say
...
Any other arguments that maybe passed to the aggregating function.

So I tried:

 dcast.data.table(dt, carb ~ cyl, value.var='mpg', fun=weighted.mean, w=wt)
Error in weighted.mean.default(data[[value.var]][0], ...) :
  'x' and 'w' must have the same length

The docs also say that value.var can be a list, so I tried that:

 In cases where value.var is a list, the function should be able to handle a 
list input and provide a single value or list of length one as output.

 dcast.data.table(dt, carb ~ cyl, value.var=list('mpg','wt'), 
 fun=weighted.mean)
Error in dcast.data.table(dt, carb ~ cyl, value.var = list(mpg, wt),  :
  'value.var' must be a character vector of length 1.

I didn't actually expect that to work, but without an example I don't know what 
else to try.  Any hints would be greatly appreciated.

Thanks,

Roger



***
This message and any attachments are for the intended recipient's use only.
This message may contain confidential, proprietary or legally privileged
information. No right to confidential or privileged treatment
of this message is waived or lost by an error in transmission.
If you have received this message in error, please immediately
notify the sender by e-mail, delete the message, any attachments and all
copies from your system and destroy any hard copies.  You must
not, directly or indirectly, use, disclose, distribute,
print or copy any part of this message or any attachments if you are not
the intended recipient.

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