Re: [R] saving large matrices with decimal numbers
Moreno Ignazio Coco wrote: Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. well, that's exactly the point, I didn't do anything fancy or special, just save the matrix I gave you before (1024 X 768) either in format txt. That's strange, because image - matrix(0.1, 1024, 768) write.table(image, ~/data.txt, col.names=FALSE, row.names=FALSE) file.show(~/data.txt) works fine for me. Hence I suspect you did something very different, but since you have still not provided any piece of reproducible code, we cannot help. Uwe Ligges write.table(image, ~/mydata/blablabla/data.txt, col.names=F, row.names=F) or csv: write.csv (image, ~/mydata/blablabla/data.csv) both cases the output is an empty file. Do you know what can be the problem? Thanks a lot, Moreno write.csv (image, /afs/inf.ed.ac.uk/user/s07/s0788806/R/r_data/ProdEyeTrack/DataFrame/Clustered/Clut/Cluster1/Cl1Verb-tr.csv.1) Quoting Uwe Ligges lig...@statistik.tu-dortmund.de: Moreno Ignazio Coco wrote: Hi everybody, I am struggling to save txt. or csv. large sparse matrices (1024 X 768 image size), initialized at 0.1. image1[0:10,0:10] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [2,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [3,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [4,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [5,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [6,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [7,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [8,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [9,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [10,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 with small distributions located at different points of matrix. If I try the same matrix but initialized at 0, it can save it. It seems that R manages to save up around 800 X 600 decimal matrices but for bigger sizes the output is an empty file. Does anyone know whether there is a limit in saving such matrices and how can I work around this problem? Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Best wishes, Uwe Ligges Thanks a lot, Regards, Moreno __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] saving large matrices with decimal numbers
Moreno Ignazio Coco wrote: Hi everybody, I am struggling to save txt. or csv. large sparse matrices (1024 X 768 image size), initialized at 0.1. image1[0:10,0:10] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [2,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [3,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [4,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [5,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [6,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [7,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [8,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [9,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [10,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 with small distributions located at different points of matrix. If I try the same matrix but initialized at 0, it can save it. It seems that R manages to save up around 800 X 600 decimal matrices but for bigger sizes the output is an empty file. Does anyone know whether there is a limit in saving such matrices and how can I work around this problem? Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Best wishes, Uwe Ligges Thanks a lot, Regards, Moreno __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] saving large matrices with decimal numbers
Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. well, that's exactly the point, I didn't do anything fancy or special, just save the matrix I gave you before (1024 X 768) either in format txt. write.table(image, ~/mydata/blablabla/data.txt, col.names=F, row.names=F) or csv: write.csv (image, ~/mydata/blablabla/data.csv) both cases the output is an empty file. Do you know what can be the problem? Thanks a lot, Moreno write.csv (image, /afs/inf.ed.ac.uk/user/s07/s0788806/R/r_data/ProdEyeTrack/DataFrame/Clustered/Clut/Cluster1/Cl1Verb-tr.csv.1) Quoting Uwe Ligges lig...@statistik.tu-dortmund.de: Moreno Ignazio Coco wrote: Hi everybody, I am struggling to save txt. or csv. large sparse matrices (1024 X 768 image size), initialized at 0.1. image1[0:10,0:10] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [2,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [3,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [4,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [5,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [6,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [7,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [8,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [9,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [10,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 with small distributions located at different points of matrix. If I try the same matrix but initialized at 0, it can save it. It seems that R manages to save up around 800 X 600 decimal matrices but for bigger sizes the output is an empty file. Does anyone know whether there is a limit in saving such matrices and how can I work around this problem? Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Best wishes, Uwe Ligges Thanks a lot, Regards, Moreno -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] saving large matrices with decimal numbers
Hi image-matrix(0.1, 768,1024) image[1:10, 1:10] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [2,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [3,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [4,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [5,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [6,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [7,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [8,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [9,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [10,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 write.table(image, temp.txt,col.names=F, row.names=F) saved without problems to working directory. So I suspect that in your case it is a problem in specifying the output file. Couldn't be the output file opened in some other programme? regards Petr r-help-boun...@r-project.org napsal dne 04.09.2009 12:04:42: Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. well, that's exactly the point, I didn't do anything fancy or special, just save the matrix I gave you before (1024 X 768) either in format txt. write.table(image, ~/mydata/blablabla/data.txt, col.names=F, row.names=F) or csv: write.csv (image, ~/mydata/blablabla/data.csv) both cases the output is an empty file. Do you know what can be the problem? Thanks a lot, Moreno write.csv (image, /afs/inf.ed.ac.uk/user/s07/s0788806/R/r_data/ProdEyeTrack/DataFrame/ Clustered/Clut/Cluster1/Cl1Verb-tr.csv.1) Quoting Uwe Ligges lig...@statistik.tu-dortmund.de: Moreno Ignazio Coco wrote: Hi everybody, I am struggling to save txt. or csv. large sparse matrices (1024 X 768 image size), initialized at 0.1. image1[0:10,0:10] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [2,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [3,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [4,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [5,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [6,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [7,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [8,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [9,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 [10,] 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 with small distributions located at different points of matrix. If I try the same matrix but initialized at 0, it can save it. It seems that R manages to save up around 800 X 600 decimal matrices but for bigger sizes the output is an empty file. Does anyone know whether there is a limit in saving such matrices and how can I work around this problem? Please tell us what you did exactly when you got the empty file: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Best wishes, Uwe Ligges Thanks a lot, Regards, Moreno -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
