[R] axis scaling problem
On the attached figure, I had to use ylim (0,3) to have enough space for the labels to be plotted. However, the values on the y-axis are never bigger than 1, so the axis labeling does not make much sense. Can I only get y-axis tick marks at 0 and 1 but still have the additional plotting space for the labels? Thanks Andreas -- -- Andreas Zankl, MD Division of Molecular Pediatrics Clinique Infantile 02/50 CHUV Avenue Pierre Decker 2 CH-1011 Lausanne Switzerland Phone: +41-21-3143778 Fax: +41-21-3143546 Email: [EMAIL PROTECTED]__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] how to set environment variables?
Renviron is in an odd places on Macs: /Library/Frameworks/R.framework/Versions/2.1.1/Resources/etc/Renviron As suggested in ?Startup, I added the R_GSCMD variable to Renviron.site instead. Thanks for your help Andreas > > >>See the first paragraph of ?Startup. > >If this is literally `Renviron' (not ~/.Renviron or Renviron.site) >see also the Note in that help file. > >> >>Andy >> >>>From: Andreas Zankl >>> >>>Thanks. Sys.putenv did work, however this has to be set every >>>time I start R. >>> >>>gs is on my path and works fine under Unix, but I get the following >>>error when running bitmap (without setting R_GSCMD first): >>> >>>/bin/sh: line 1: gs: command not found >>> >>>I assume the problem is related to the fact that I am using the csh >>>shell, while the new Mac OS X default shell is now bash. So I guess >>>my .csh path settings are ignored by R calling bash. I solved the >>>problem by adding my R_GSCMD settings to the Renviron file >>>(R_GSCMD=${RGSCMD-'/sw/bin/gs'} in my case). Hope this helps anyone >>>with the same problem. >>> >>>Thanks again for your help! >>>Andreas >>> >>> >>> >>>At 12:51 +0100 20.10.2005, Prof Brian Ripley wrote: >>>>On Thu, 20 Oct 2005, Andreas Zankl wrote: >>>> >>>>>The help file of the R bitmap function says that I have to set the >>>>>environment variable R_GSCMD to the path of my Ghostscript >>>>>installation. >>>> >>>>Actually, it does not say that. It says you _can_ specify the path >>>>to your executable (not the installation) that way. It will work >>>>without doing so if the executable 'gs' (on a Unix-alike) is on your >>>>path, which it normally is on Unix-alikes. >>>> >>>>>How do I set this variable (either by commandline or in >>>>>R.app for Mac)? Sorry if this sounds like a very basic question, but >>>>>I could not find the answer anywhere else. >>>> >>>>?Sys.putenv for how to do it from R. help.search("environment >>>>variable") got me there. >>>> >>>>-- >>>>Brian D. Ripley, [EMAIL PROTECTED] >>>>Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ >>>>University of Oxford, Tel: +44 1865 272861 (self) >>>>1 South Parks Road, +44 1865 272866 (PA) >>>>Oxford OX1 3TG, UKFax: +44 1865 272595 >>> >>> >>>-- >>>PLEASE NOTE MY NEW EMAIL ADDRESS: [EMAIL PROTECTED] >>> >>>-- >>>Andreas Zankl, MD >>>Division of Molecular Pediatrics >>>Clinique Infantile 02/50 >>>CHUV >>>Avenue Pierre Decker 2 >>>CH-1011 Lausanne >>>Switzerland >>>Phone: +41-21-3143778 >>>Fax: +41-21-3143546 >>>Email: [EMAIL PROTECTED] >>> >>>__ >>>R-help@stat.math.ethz.ch mailing list >>>https://stat.ethz.ch/mailman/listinfo/r-help >>>PLEASE do read the posting guide! >>>http://www.R-project.org/posting-guide.html >>> >> >> >>-- >>Notice: This e-mail message, together with any attachments, >>contains information of Merck & Co., Inc. (One Merck Drive, >>Whitehouse Station, New Jersey, USA 08889), and/or its affiliates >>(which may be known outside the United States as Merck Frosst, >>Merck Sharp & Dohme or MSD and in Japan, as Banyu) that may be >>confidential, proprietary copyrighted and/or legally privileged. It >>is intended solely for the use of the individual or entity named on >>this message. If you are not the intended recipient, and have >>received this message in error, please notify us immediately by >>reply e-mail and then delete it from your system. >>-- >> > >-- >Brian D. Ripley, [EMAIL PROTECTED] >Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ >University of Oxford, Tel: +44 1865 272861 (self) >1 South Parks Road, +44 1865 272866 (PA) >Oxford OX1 3TG, UKFax: +44 1865 272595 __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] how to set environment variables?
Thanks. Sys.putenv did work, however this has to be set every time I start R. gs is on my path and works fine under Unix, but I get the following error when running bitmap (without setting R_GSCMD first): /bin/sh: line 1: gs: command not found I assume the problem is related to the fact that I am using the csh shell, while the new Mac OS X default shell is now bash. So I guess my .csh path settings are ignored by R calling bash. I solved the problem by adding my R_GSCMD settings to the Renviron file (R_GSCMD=${RGSCMD-'/sw/bin/gs'} in my case). Hope this helps anyone with the same problem. Thanks again for your help! Andreas At 12:51 +0100 20.10.2005, Prof Brian Ripley wrote: >On Thu, 20 Oct 2005, Andreas Zankl wrote: > >>The help file of the R bitmap function says that I have to set the >>environment variable R_GSCMD to the path of my Ghostscript >>installation. > >Actually, it does not say that. It says you _can_ specify the path >to your executable (not the installation) that way. It will work >without doing so if the executable 'gs' (on a Unix-alike) is on your >path, which it normally is on Unix-alikes. > >>How do I set this variable (either by commandline or in >>R.app for Mac)? Sorry if this sounds like a very basic question, but >>I could not find the answer anywhere else. > >?Sys.putenv for how to do it from R. help.search("environment >variable") got me there. > >-- >Brian D. Ripley, [EMAIL PROTECTED] >Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ >University of Oxford, Tel: +44 1865 272861 (self) >1 South Parks Road, +44 1865 272866 (PA) >Oxford OX1 3TG, UK Fax: +44 1865 272595 -- PLEASE NOTE MY NEW EMAIL ADDRESS: [EMAIL PROTECTED] -- Andreas Zankl, MD Division of Molecular Pediatrics Clinique Infantile 02/50 CHUV Avenue Pierre Decker 2 CH-1011 Lausanne Switzerland Phone: +41-21-3143778 Fax: +41-21-3143546 Email: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
[R] how to set environment variables?
The help file of the R bitmap function says that I have to set the environment variable R_GSCMD to the path of my Ghostscript installation. How do I set this variable (either by commandline or in R.app for Mac)? Sorry if this sounds like a very basic question, but I could not find the answer anywhere else. Many thanks Andreas -- -- Andreas Zankl, MD Division of Molecular Pediatrics Clinique Infantile 02/50 CHUV Avenue Pierre Decker 2 CH-1011 Lausanne Switzerland Phone: +41-21-3143778 Fax: +41-21-3143546 Email: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
[R] how to make legends on histograms
I have a histogram with histograms for several datasets superimposed. How can I add a legend that indicates which dataset uses which linetype? Thanks Andreas -- -- Dr. med. Andreas Zankl Division de Pediatrie Moleculaire Clinique Infantile 02/50 CHUV Avenue Pierre Decker 2 CH-1011 Lausanne Suisse Tel.: +41-21-3143778 Fax: +41-21-3143546 Email: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html