[R] About PLR

2007-04-17 Thread Nitish Kumar Mishra
Hello Sir/Mam
I am Nitish Kumar Mishra from IMTECH, Chandigarh, India. I want to
calculate the Principal Component Analysis(PCA), PLS of the input file and
find top 30 PCAs of this file using PLS in R. I am asking regarding
Linux(Red Hat 9) operating system.
I have downloaded PLS from Crains site and try to installed it, but don't
installed it.
How I can download and installed PLS(for PCA and PLS) in R using Linux.
Please me how I can installed PLR in R(Linux).
Thanking you.


-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] Help me about MADE4

2007-04-18 Thread Nitish Kumar Mishra
Hi,
Help me, how I can Install made4(micoarray analysis tool) in R using linux
OS.
thanking you.


-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] about R square

2007-04-22 Thread Nitish Kumar Mishra
Hi,
I am simply asking about coefficient od determination(R square), is its
value more than 1 also posiible.
Because it ranges from 0-1. So I want to know that R squre may be more
than one. If yes what is its interpretation.
Thanking to all of You(R help group).

-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] about R square value

2007-04-22 Thread Nitish Kumar Mishra
Hi,
I am simply asking about coefficient od determination(R square), is its
value more than 1 also posiible.
Because it ranges from 0-1. So I want to know that R squre may be more
than one. If yes what is its interpretation.
Thanking to all of You(R help group).

-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] about R square value

2007-04-22 Thread Nitish Kumar Mishra
Hi,
I am simply asking about coefficient od determination(R square), is its
value more than 1 also posiible.
Because it ranges from 0-1. So I want to know that R squre may be more
than one. If yes what is its interpretation.
Thanking to all of You(R help group).



-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] R-About PLSR

2007-05-25 Thread Nitish Kumar Mishra
hi R help group,
I have installed PLS package in R and use it for princomp & prcomp
commands for calculating PCA using its example file(USArrests example).
But How I can use PLS for Partial least square, R square, mvrCv one more
think how i can import external file in R. When I use plsr, R2, RMSEP it
show error could not find function plsr, RMSEP etc.
How I can calculate PLS, R2, RMSEP, PCR, MVR using pls package in R.
Thanking you



-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] About Genetic Algorithm package

2007-06-19 Thread Nitish Kumar Mishra
Hi R-help group member,
Please give me idea about Genetic algorithm and Simulated anealing package
in R(Unix). I want to use this for the feature selection in
Chemoinformatics.
Thanking you.


-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] About dataset

2007-07-04 Thread Nitish Kumar Mishra
Hi R hep group member,
I want to know that how I can call my data in R for princomp function.
I want to calculate PCA of 200 descriptors of 4000 molecule(I am using
Linux). How I can call this in R.
Thanking you.


-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] about R, RMSEP, R2, PCR

2007-07-06 Thread Nitish Kumar Mishra
Hi,
I want to calculate PLS package in R. Now I want to calculate R, MSEP,
RMSEP and R2 of PLSR and PCR using this.
I also add this in library of R. How I can calculate R, MSEP, RMSEP and R2
of PLSR and PCR in R.
I s any other method then please also suggest me. Simply I want to
calculate these value.
Thanking you.
-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


[R] About eigen value

2007-07-13 Thread Nitish Kumar Mishra
Hi R help group,
Any budy give me tutorial/paper for eigen value calculation and PCA.
Thanking you.


-- 
Nitish Kumar Mishra
Junior Research Fellow
BIC, IMTECH, Chandigarh, India
E-Mail Address:
[EMAIL PROTECTED]
[EMAIL PROTECTED]

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.