[R] .First.lib doesn't appear to be running after calling library()

2003-10-07 Thread Crispin Miller
Hi - so I've dusted off the C bits of my brain and gotten a library written for my 
package...
 
It passes R CMD check ok, and I've put a file called '.First.lib.R' in the pacakge's 
'R'  subdirectory. Its permissions are 644.

It says:

.First.lib - function(lib,pkg) {
   library.dynam(foo,pkg,lib);
   require(affy,quietly=TRUE);
}


I build and INSTALL the package, start R and then call library(foo).
I deduce that my '.First.lib' isn't running because the affy library doesn't get 
loaded - and neither does my dynamic library (which complies ok and results in 
'foo.so' being put in the 'src/' directory of the package)...

Any ideas what I'm doing wrong?

Crispin
 


 
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Re: [R] .First.lib doesn't appear to be running after calling library()

2003-10-07 Thread Prof Brian Ripley
On Tue, 7 Oct 2003, Crispin Miller wrote:

 Hi - so I've dusted off the C bits of my brain and gotten a library written for my 
 package...
  
 It passes R CMD check ok, and I've put a file called '.First.lib.R' in the pacakge's 
 'R'  subdirectory. Its permissions are 644.
 
 It says:
 
 .First.lib - function(lib,pkg) {
library.dynam(foo,pkg,lib);
require(affy,quietly=TRUE);
 }
 
 
 I build and INSTALL the package, start R and then call library(foo).
 I deduce that my '.First.lib' isn't running because the affy library doesn't get 
 loaded - and neither does my dynamic library (which complies ok and results in 
 'foo.so' being put in the 'src/' directory of the package)...
 
 Any ideas what I'm doing wrong?

Don't use a file name starting with a dot.  Assuming this is Unix and R 
1.7.1, INSTALL does

Rfiles=`LC_COLLATE=C ls R/*.[RSqrs] R/${R_OSTYPE}/*.[RSqrs] 2/dev/null`

and ls will omit file names starting with a dot.

`Writing R Extensions' says

The @file{R} subdirectory contains @R{} code files.  The code files to
be installed must start with a (lower or upper case) letter and have one
of the extensions @file{.R}, @file{.S}, @file{.q}, @file{.r}, or
@file{.s}. 

but it seems we don't quite enforce that on either Unix nor Windows.

-- 
Brian D. Ripley,  [EMAIL PROTECTED]
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel:  +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax:  +44 1865 272595

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