[R] compiling latest version of R

2007-03-07 Thread Jenny Barnes
Dear R-help community,

I have had trouble in the past installing the latest version of R: we got the 
errors shown below (the computer specifications and version of R are below 
that). Does anybody have tips for compiling the latest version of R so that I 
can avoid these errors?

configure
make
...
...
...

f90: CODE: 0 WORDS, DATA: 0 WORDS
gcc -G -L/usr/local/lib -o stats.so init.o kmeans.o  ansari.o bandwidths.o
chisq
sim.o d2x2xk.o fexact.o kendall.o ks.o  line.o smooth.o  prho.o swilk.o 
ksmooth
.o loessc.o isoreg.o Srunmed.o Trunmed.o  dblcen.o distance.o
hclust-utils.o  nl
s.o  HoltWinters.o PPsum.o arima.o burg.o filter.o  mAR.o pacf.o starma.o
port.o
 family.o sbart.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o 
sgram.o si
nerp.o sslvrg.o stxwx.o  hclust.o kmns.o  eureka.o stl.o portsrc.o
-L../../../..
/lib -lRblas  -lg2c -lm -lgcc_s
mkdir ../../../../library/stats/libs
building package 'datasets'
mkdir ../../../library/datasets
mkdir ../../../library/datasets/R
mkdir ../../../library/datasets/data
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
'/tmp/R-2.4.0/library/stats/libs/stats.so'
:
  ld.so.1: R: fatal: relocation error: file
/tmp/R-2.4.0/library/stats/libs/stat
s.so: symbol __i_abs: referenced symbol not found
Execution halted
*** Error code 1


These are my specifications:

platform   sparc-sun-solaris2.10 
arch   sparc 
os solaris2.10   
system sparc, solaris2.10
status   
major  2 
minor  3.1   
year   2006  
month  06
day01
svn rev38247 
language   R 
version.string Version 2.3.1 (2006-06-01)


Many thanks for your time in reading this problem, I look forward to hearing 
your suggestions and advice,

Jenny


~~
Jennifer Barnes
PhD student: long range drought prediction 
Climate Extremes Group
Department of Space and Climate Physics
University College London
Holmbury St Mary 
Dorking, Surrey, RH5 6NT
Tel: 01483 204149
Mob: 07916 139187
Web: http://climate.mssl.ucl.ac.uk

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] compiling latest version of R

2007-03-07 Thread Uwe Ligges


Jenny Barnes wrote:
 Dear R-help community,
 
 I have had trouble in the past installing the latest version of R: we got the 
 errors shown below (the computer specifications and version of R are below 
 that). Does anybody have tips for compiling the latest version of R so that I 
 can avoid these errors?

1. 2.4.1 is recent, not 2.3.1 as shown at the bottom.
2. You have some R-2.4.0 in your path or set in your R_LIBS, remove that 
one first.

Uwe Ligges


 
 configure
 make
 ...
 ...
 ...
 
 f90: CODE: 0 WORDS, DATA: 0 WORDS
 gcc -G -L/usr/local/lib -o stats.so init.o kmeans.o  ansari.o bandwidths.o
 chisq
 sim.o d2x2xk.o fexact.o kendall.o ks.o  line.o smooth.o  prho.o swilk.o 
 ksmooth
 .o loessc.o isoreg.o Srunmed.o Trunmed.o  dblcen.o distance.o
 hclust-utils.o  nl
 s.o  HoltWinters.o PPsum.o arima.o burg.o filter.o  mAR.o pacf.o starma.o
 port.o
  family.o sbart.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o 
 sgram.o si
 nerp.o sslvrg.o stxwx.o  hclust.o kmns.o  eureka.o stl.o portsrc.o
 -L../../../..
 /lib -lRblas  -lg2c -lm -lgcc_s
 mkdir ../../../../library/stats/libs
 building package 'datasets'
 mkdir ../../../library/datasets
 mkdir ../../../library/datasets/R
 mkdir ../../../library/datasets/data
 Error in dyn.load(x, as.logical(local), as.logical(now)) :
 unable to load shared library
 '/tmp/R-2.4.0/library/stats/libs/stats.so'
 :
   ld.so.1: R: fatal: relocation error: file
 /tmp/R-2.4.0/library/stats/libs/stat
 s.so: symbol __i_abs: referenced symbol not found
 Execution halted
 *** Error code 1
 
 
 These are my specifications:
 
 platform   sparc-sun-solaris2.10 
 arch   sparc 
 os solaris2.10   
 system sparc, solaris2.10
 status   
 major  2 
 minor  3.1   
 year   2006  
 month  06
 day01
 svn rev38247 
 language   R 
 version.string Version 2.3.1 (2006-06-01)
 
 
 Many thanks for your time in reading this problem, I look forward to hearing 
 your suggestions and advice,
 
 Jenny
 
 
 ~~
 Jennifer Barnes
 PhD student: long range drought prediction 
 Climate Extremes Group
 Department of Space and Climate Physics
 University College London
 Holmbury St Mary 
 Dorking, Surrey, RH5 6NT
 Tel: 01483 204149
 Mob: 07916 139187
 Web: http://climate.mssl.ucl.ac.uk
 
 __
 R-help@stat.math.ethz.ch mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.

__
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.