subject:"\[R\-SIG\-Mac\] binaries for R 4.3 x86

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-25 Thread Simon Urbanek

Ah, ok, thanks, It wasn't clear to me from the description, now also fixed.

Cheers,
Simon

 

> On Apr 25, 2023, at 8:01 PM, Uwe Ligges  
> wrote:
> 
> No, you have fixed the direct link to the binary, but further down the page 
> there is a link "big-sur-x86_64" that actally point to thw wrong directory.
> That is not yet fixed on the master.
> 
> Best,
> Uwe
> 
> 
> 
> On 24.04.2023 23:19, Simon Urbanek wrote:
>> This has been fixed a while time ago so I suspect the culprit are outdated 
>> mirrors. If in doubt, please use
>> https://mac.R-project.org/bin/macosx
>> which is the most up-to-date.
>> Cheers,
>> Simon
>>> On Apr 25, 2023, at 12:51 AM, Uwe Ligges  
>>> wrote:
>>> 
>>> 
>>> 
>>> On 24.04.2023 14:41, Kenneth Knoblauch wrote:
 Hi,
 I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to 
 upgrade to macOS 12 first because I was at 10 and my 2017 Intel Mac Air 
 doesn't seem to be able to run later versions.  I was looking at the Mac 
 binaries at the R for mac OS page and it looks like both links
 big-sur-x86_64 and big-sur-arm64 lead to a page with header:
 Index of /bin/macosx/big-sur-arm64
 Is this just a heading error or is there a misdirect in the link?
>>> 
>>> Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
>>> Simon will fix it soon, too.
>>> 
>>> Best,
>>> Uwe Ligges
>>> 
 The formalities:
 sessionInfo()
 R version 4.3.0 (2023-04-21)
 Platform: x86_64-apple-darwin20 (64-bit)
 Running under: macOS Monterey 12.6.5
 Matrix products: default
 BLAS:   
 /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
 LAPACK: 
 /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
   LAPACK version 3.11.0
 locale:
 [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
 time zone: Europe/Paris
 tzcode source: internal
 attached base packages:
 [1] stats graphics  grDevices utils datasets  methods   base
 loaded via a namespace (and not attached):
 [1] compiler_4.3.0
> capabilities()
jpeg pngtiff   tcltk X11aqua
 http/ftp
TRUETRUETRUETRUETRUETRUE
 TRUE
 sockets  libxmlfifo  cledit   iconv NLS
Rprof
TRUE   FALSETRUETRUETRUETRUE
 TRUE
 profmem   cairo ICU long.double libcurl
TRUETRUETRUETRUETRUE
  Thank you.
 best,
 Ken
___
   Kenneth Knoblauch
  Inserm U1208
  Stem-cell and Brain Research Institute
  18 avenue du Doyen Lépine
  69500 Bron
  France
  tel: +33 (0)4 72 91 34 77
  fax: +33 (0)4 72 91 34 61
  portable: +33 (0)6 84 10 64 10
  https://sbri.fr/public-profile/63/single-member/
 ___
 R-SIG-Mac mailing list
 R-SIG-Mac@r-project.org
 https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>> 
>>> ___
>>> R-SIG-Mac mailing list
>>> R-SIG-Mac@r-project.org
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>> 
> 

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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-25 Thread Uwe Ligges

No, you have fixed the direct link to the binary, but further down the 
page there is a link "big-sur-x86_64" that actally point to thw wrong 
directory.

That is not yet fixed on the master.

Best,
Uwe



On 24.04.2023 23:19, Simon Urbanek wrote:

This has been fixed a while time ago so I suspect the culprit are outdated 
mirrors. If in doubt, please use

https://mac.R-project.org/bin/macosx

which is the most up-to-date.

Cheers,
Simon




On Apr 25, 2023, at 12:51 AM, Uwe Ligges  
wrote:



On 24.04.2023 14:41, Kenneth Knoblauch wrote:

Hi,
I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to upgrade 
to macOS 12 first because I was at 10 and my 2017 Intel Mac Air doesn't seem to 
be able to run later versions.  I was looking at the Mac binaries at the R for 
mac OS page and it looks like both links
big-sur-x86_64 and big-sur-arm64 lead to a page with header:
Index of /bin/macosx/big-sur-arm64
Is this just a heading error or is there a misdirect in the link?


Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure Simon 
will fix it soon, too.

Best,
Uwe Ligges


The formalities:
sessionInfo()
R version 4.3.0 (2023-04-21)
Platform: x86_64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.6.5
Matrix products: default
BLAS:   
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
LAPACK: 
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
  LAPACK version 3.11.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Europe/Paris
tzcode source: internal
attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base
loaded via a namespace (and not attached):
[1] compiler_4.3.0

capabilities()

jpeg pngtiff   tcltk X11aqua
http/ftp
TRUETRUETRUETRUETRUETRUE
TRUE
 sockets  libxmlfifo  cledit   iconv NLS   
Rprof
TRUE   FALSETRUETRUETRUETRUE
TRUE
 profmem   cairo ICU long.double libcurl
TRUETRUETRUETRUETRUE
  Thank you.
best,
Ken
___
   Kenneth Knoblauch
  Inserm U1208
  Stem-cell and Brain Research Institute
  18 avenue du Doyen Lépine
  69500 Bron
  France
  tel: +33 (0)4 72 91 34 77
  fax: +33 (0)4 72 91 34 61
  portable: +33 (0)6 84 10 64 10
  https://sbri.fr/public-profile/63/single-member/
 ___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac


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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Kenneth Knoblauch

Simon,

Thank you.

Ken

Kenneth Knoblauch
Inserm U1208
Stem-cell and Brain Research Institute
18 avenue du Doyen Lépine
69500 Bron
France
tel: +33 (0)4 72 91 34 77
fax: +33 (0)4 72 91 34 61
portable: +33 (0)6 84 10 64 10
https://sbri.fr/public-profile/63/single-member/

On 24 Apr 2023, at 23:27, Simon Urbanek  wrote:

This has been fixed a while time ago so I suspect the culprit are outdated 
mirrors. If in doubt, please use

https://mac.R-project.org/bin/macosx

which is the most up-to-date.

Cheers,
Simon



On Apr 25, 2023, at 12:51 AM, Uwe Ligges  
wrote:



On 24.04.2023 14:41, Kenneth Knoblauch wrote:
Hi,
I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to upgrade 
to macOS 12 first because I was at 10 and my 2017 Intel Mac Air doesn't seem to 
be able to run later versions.  I was looking at the Mac binaries at the R for 
mac OS page and it looks like both links
big-sur-x86_64 and big-sur-arm64 lead to a page with header:
Index of /bin/macosx/big-sur-arm64
Is this just a heading error or is there a misdirect in the link?

Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure Simon 
will fix it soon, too.

Best,
Uwe Ligges

The formalities:
sessionInfo()
R version 4.3.0 (2023-04-21)
Platform: x86_64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.6.5
Matrix products: default
BLAS:   
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
LAPACK: 
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
  LAPACK version 3.11.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Europe/Paris
tzcode source: internal
attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base
loaded via a namespace (and not attached):
[1] compiler_4.3.0
capabilities()
  jpeg pngtiff   tcltk X11aqua
http/ftp
  TRUETRUETRUETRUETRUETRUE
TRUE
   sockets  libxmlfifo  cledit   iconv NLS   
Rprof
  TRUE   FALSETRUETRUETRUETRUE
TRUE
   profmem   cairo ICU long.double libcurl
  TRUETRUETRUETRUETRUE
Thank you.
best,
Ken
  ___
 Kenneth Knoblauch
Inserm U1208
Stem-cell and Brain Research Institute
18 avenue du Doyen Lépine
69500 Bron
France
tel: +33 (0)4 72 91 34 77
fax: +33 (0)4 72 91 34 61
portable: +33 (0)6 84 10 64 10
https://sbri.fr/public-profile/63/single-member/
   ___
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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Simon Urbanek

Kenneth,

type="mac.binary" is not appropriate as forces is only for old High-Sierra 
binaries which don't exist for R 4.3.0 anymore as that build is no longer 
supported. You should leave type="both" (default, recommended) or type="binary".

Cheers,
Simon



> On Apr 25, 2023, at 1:12 AM, Kenneth Knoblauch  
> wrote:
> 
> Thank you Uwe for the rapid response,
> 
> I tried: 
> 
> install.packages(p42[3], .libPaths()[1], repos = 
> "https://cran.r-project.org/bin/macosx/big-sur-x86_64/;, type = "mac.binary")
> 
> Warning: unable to access index for repository 
> https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3:
>  cannot open URL 
> 'https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3/PACKAGES'
> 
> and
> 
> install.packages(p42[3], .libPaths()[1], repos = 
> "https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3;, type = 
> "mac.binary")
> 
> Warning: unable to access index for repository 
> https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3:
>  cannot open URL 
> 'https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3/PACKAGES'
> 
> and 
> 
> install.packages(p42, .libPaths()[1], repos = "https://cran.r-project.org;, 
> type = "mac.binary")
> 
> Warning: unable to access index for repository 
> https://cran.r-project.org/bin/macosx/contrib/4.3:
>  cannot open URL 'https://cran.r-project.org/bin/macosx/contrib/4.3/PACKAGES'
> 
> where p42 was a character vector of the package names that I had installed 
> under 4.2
> 
> Any guidance would be greatly appreciated.
> 
> Thank you, in advance.
> 
> best,
> 
> Ken
> 
>  ___
>  Kenneth Knoblauch
> Inserm U1208
> Stem-cell and Brain Research Institute
> 18 avenue du Doyen Lépine
> 69500 Bron
> France
> tel: +33 (0)4 72 91 34 77
> fax: +33 (0)4 72 91 34 61
> portable: +33 (0)6 84 10 64 10
> https://sbri.fr/public-profile/63/single-member/
> 
> 
> 
> 
> 
> De : Uwe Ligges 
> Envoyé : lundi 24 avril 2023 14:51
> À : Kenneth Knoblauch; r-sig-mac@r-project.org
> Objet : Re: [R-SIG-Mac] binaries for R 4.3 x86_64
> 
> 
> 
> On 24.04.2023 14:41, Kenneth Knoblauch wrote:
>> Hi,
>> 
>> I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to 
>> upgrade to macOS 12 first because I was at 10 and my 2017 Intel Mac Air 
>> doesn't seem to be able to run later versions.  I was looking at the Mac 
>> binaries at the R for mac OS page and  it looks like both links
>> 
>> big-sur-x86_64 and big-sur-arm64 lead to a page with header:
>> 
>> Index of /bin/macosx/big-sur-arm64
>> 
>> Is this just a heading error or is there a misdirect in the link?
> 
> Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
> Simon will fix it soon, too.
> 
> Best,
> Uwe Ligges
> 
>> 
>> The formalities:
>> 
>> sessionInfo()
>> R version 4.3.0 (2023-04-21)
>> Platform: x86_64-apple-darwin20 (64-bit)
>> Running under: macOS Monterey 12.6.5
>> 
>> Matrix products: default
>> BLAS:   
>> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
>> LAPACK: 
>> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
>>   LAPACK version 3.11.0
>> 
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>> 
>> time zone: Europe/Paris
>> tzcode source: internal
>> 
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>> 
>> loaded via a namespace (and not attached):
>> [1] compiler_4.3.0
>>> capabilities()
>>  jpeg pngtiff   tcltk X11aqua
>> http/ftp
>>  TRUETRUETRUETRUETRUETRUE
>> TRUE
>>   sockets  libxmlfifo  cledit   iconv NLS
>>Rprof
>>  TRUE   FALSETRUETRUETRUETRUE
>> TRUE
>>   profmem   cairo ICU long.double libcurl
>>  TRUETRUETRUETRUETRUE
>> 
>>Thank you.
>> 
>> best,
>> 
>> Ken
>> 
>>
>> ___
>> Kenneth Knoblauch
>>Inserm U1208
>>Stem-cell and Brain Research Institute
>>18 avenue du Doyen Lépine
>>69500 Bron
>>France
>>tel: +33 (0)4 72 91 34 77
>>fax: +33 (0)4 72 91 34 61
>>portable: +33 (0)6 84 10 64 10
>>https://sbri.fr/public-profile/63/single-member/
>>   
>> ___
>> R-SIG-Mac mailing list
>> R-SIG-Mac@r-project.org
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> 
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> 

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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Simon Urbanek

This has been fixed a while time ago so I suspect the culprit are outdated 
mirrors. If in doubt, please use

https://mac.R-project.org/bin/macosx

which is the most up-to-date.

Cheers,
Simon



> On Apr 25, 2023, at 12:51 AM, Uwe Ligges  
> wrote:
> 
> 
> 
> On 24.04.2023 14:41, Kenneth Knoblauch wrote:
>> Hi,
>> I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to 
>> upgrade to macOS 12 first because I was at 10 and my 2017 Intel Mac Air 
>> doesn't seem to be able to run later versions.  I was looking at the Mac 
>> binaries at the R for mac OS page and it looks like both links
>> big-sur-x86_64 and big-sur-arm64 lead to a page with header:
>> Index of /bin/macosx/big-sur-arm64
>> Is this just a heading error or is there a misdirect in the link?
> 
> Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
> Simon will fix it soon, too.
> 
> Best,
> Uwe Ligges
> 
>> The formalities:
>> sessionInfo()
>> R version 4.3.0 (2023-04-21)
>> Platform: x86_64-apple-darwin20 (64-bit)
>> Running under: macOS Monterey 12.6.5
>> Matrix products: default
>> BLAS:   
>> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
>> LAPACK: 
>> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
>>   LAPACK version 3.11.0
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>> time zone: Europe/Paris
>> tzcode source: internal
>> attached base packages:
>> [1] stats graphics  grDevices utils datasets  methods   base
>> loaded via a namespace (and not attached):
>> [1] compiler_4.3.0
>>> capabilities()
>>jpeg pngtiff   tcltk X11aqua
>> http/ftp
>>TRUETRUETRUETRUETRUETRUE  
>>   TRUE
>> sockets  libxmlfifo  cledit   iconv NLS  
>>  Rprof
>>TRUE   FALSETRUETRUETRUETRUE  
>>   TRUE
>> profmem   cairo ICU long.double libcurl
>>TRUETRUETRUETRUETRUE
>>  Thank you.
>> best,
>> Ken
>>___
>>   Kenneth Knoblauch
>>  Inserm U1208
>>  Stem-cell and Brain Research Institute
>>  18 avenue du Doyen Lépine
>>  69500 Bron
>>  France
>>  tel: +33 (0)4 72 91 34 77
>>  fax: +33 (0)4 72 91 34 61
>>  portable: +33 (0)6 84 10 64 10
>>  https://sbri.fr/public-profile/63/single-member/
>> ___
>> R-SIG-Mac mailing list
>> R-SIG-Mac@r-project.org
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> 
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> 

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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Kenneth Knoblauch

Actually, I was able to update everything from source.  I initially didn't 
think that would work because of the need to update Xcode and gfortran, but it 
all worked and none of that was necessary.  Thanks.


best,

Ken


 
  
 
  ___
  Kenneth Knoblauch
 Inserm U1208
 Stem-cell and Brain Research Institute
 18 avenue du Doyen Lépine
 69500 Bron
 France
 tel: +33 (0)4 72 91 34 77
 fax: +33 (0)4 72 91 34 61
 portable: +33 (0)6 84 10 64 10
 https://sbri.fr/public-profile/63/single-member/





De : Kenneth Knoblauch
Envoyé : lundi 24 avril 2023 15:12
À : Uwe Ligges; r-sig-mac@r-project.org
Objet : RE: [R-SIG-Mac] binaries for R 4.3 x86_64
    
Thank you Uwe for the rapid response,

I tried: 

install.packages(p42[3], .libPaths()[1], repos = 
"https://cran.r-project.org/bin/macosx/big-sur-x86_64/;, type = "mac.binary")

Warning: unable to access index for repository  
https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3:
  cannot open URL 
'https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3/PACKAGES'

and

install.packages(p42[3], .libPaths()[1], repos = 
"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3;, type = 
"mac.binary")

Warning: unable to access index for repository  
https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3:
  cannot open URL 
'https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3/PACKAGES'

and 

install.packages(p42, .libPaths()[1], repos = "https://cran.r-project.org;, 
type = "mac.binary")

Warning: unable to access index for repository  
https://cran.r-project.org/bin/macosx/contrib/4.3:
  cannot open URL 'https://cran.r-project.org/bin/macosx/contrib/4.3/PACKAGES'

where p42 was a character vector of the package names that I had installed 
under 4.2

Any guidance would be greatly appreciated.

Thank you, in advance.

best,

Ken

  ___
  Kenneth Knoblauch
 Inserm U1208
 Stem-cell and Brain Research Institute
 18 avenue du Doyen Lépine
 69500 Bron
 France
 tel: +33 (0)4 72 91 34 77
 fax: +33 (0)4 72 91 34 61
 portable: +33 (0)6 84 10 64 10
 https://sbri.fr/public-profile/63/single-member/
    




De : Uwe Ligges 
Envoyé : lundi 24 avril 2023 14:51
À : Kenneth Knoblauch; r-sig-mac@r-project.org
Objet : Re: [R-SIG-Mac] binaries for R 4.3 x86_64
    


On 24.04.2023 14:41, Kenneth Knoblauch wrote:
> Hi,
> 
> I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to 
> upgrade to macOS 12 first because I was at 10 and my 2017 Intel Mac Air 
> doesn't seem to be able to run later versions.  I was looking at the Mac 
> binaries at the R for mac OS page and   it looks like both links
> 
> big-sur-x86_64 and big-sur-arm64 lead to a page with header:
> 
> Index of /bin/macosx/big-sur-arm64
> 
> Is this just a heading error or is there a misdirect in the link?

Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
Simon will fix it soon, too.

Best,
Uwe Ligges

> 
> The formalities:
> 
> sessionInfo()
> R version 4.3.0 (2023-04-21)
> Platform: x86_64-apple-darwin20 (64-bit)
> Running under: macOS Monterey 12.6.5
> 
> Matrix products: default
> BLAS:   
> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
> LAPACK: 
> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
>   LAPACK version 3.11.0
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> time zone: Europe/Paris
> tzcode source: internal
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
> 
> loaded via a namespace (and not attached):
> [1] compiler_4.3.0
>> capabilities()
> jpeg png    tiff   tcltk X11    aqua    
>http/ftp
> TRUE    TRUE    TRUE    TRUE    TRUE    TRUE  
>  TRUE
>  sockets  libxml    fifo  cledit   iconv NLS  
> Rprof
> TRUE   FALSE    TRUE    TRUE    TRUE    TRUE  
>  TRUE
>  profmem   cairo ICU long.double libcurl
> TRUE    TRUE    TRUE    TRUE    TRUE
> 
>   Thank you.
> 
> best,
> 
> Ken
>    
>   
>    ___
>    Kenneth Knoblauch
>   Inserm U1208
>   Stem-cell and Brain Research Institute
>   18 avenue du Doyen Lépine
>   69500 Bron
>   France
>   tel: +33 (0)4 72 91 34 77
>   fax: +33 (0)4 72 91 34 61
>   portable: +33 (0)6 84 10 64 10
>   https://sbri.fr/public-profile/63/single-member/
>  
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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Kenneth Knoblauch

Thank you Uwe for the rapid response,

I tried: 

install.packages(p42[3], .libPaths()[1], repos = 
"https://cran.r-project.org/bin/macosx/big-sur-x86_64/;, type = "mac.binary")

Warning: unable to access index for repository 
https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3:
  cannot open URL 
'https://cran.r-project.org/bin/macosx/big-sur-x86_64/bin/macosx/contrib/4.3/PACKAGES'

and

install.packages(p42[3], .libPaths()[1], repos = 
"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3;, type = 
"mac.binary")

Warning: unable to access index for repository 
https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3:
  cannot open URL 
'https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.3/bin/macosx/contrib/4.3/PACKAGES'

and 

install.packages(p42, .libPaths()[1], repos = "https://cran.r-project.org;, 
type = "mac.binary")

Warning: unable to access index for repository 
https://cran.r-project.org/bin/macosx/contrib/4.3:
  cannot open URL 'https://cran.r-project.org/bin/macosx/contrib/4.3/PACKAGES'

where p42 was a character vector of the package names that I had installed 
under 4.2

Any guidance would be greatly appreciated.

Thank you, in advance.

best,

Ken

  ___
  Kenneth Knoblauch
 Inserm U1208
 Stem-cell and Brain Research Institute
 18 avenue du Doyen Lépine
 69500 Bron
 France
 tel: +33 (0)4 72 91 34 77
 fax: +33 (0)4 72 91 34 61
 portable: +33 (0)6 84 10 64 10
 https://sbri.fr/public-profile/63/single-member/





De : Uwe Ligges 
Envoyé : lundi 24 avril 2023 14:51
À : Kenneth Knoblauch; r-sig-mac@r-project.org
Objet : Re: [R-SIG-Mac] binaries for R 4.3 x86_64
    


On 24.04.2023 14:41, Kenneth Knoblauch wrote:
> Hi,
> 
> I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to 
> upgrade to macOS 12 first because I was at 10 and my 2017 Intel Mac Air 
> doesn't seem to be able to run later versions.  I was looking at the Mac 
> binaries at the R for mac OS page and  it looks like both links
> 
> big-sur-x86_64 and big-sur-arm64 lead to a page with header:
> 
> Index of /bin/macosx/big-sur-arm64
> 
> Is this just a heading error or is there a misdirect in the link?

Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
Simon will fix it soon, too.

Best,
Uwe Ligges

> 
> The formalities:
> 
> sessionInfo()
> R version 4.3.0 (2023-04-21)
> Platform: x86_64-apple-darwin20 (64-bit)
> Running under: macOS Monterey 12.6.5
> 
> Matrix products: default
> BLAS:   
> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
> LAPACK: 
> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
>   LAPACK version 3.11.0
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
> 
> time zone: Europe/Paris
> tzcode source: internal
> 
> attached base packages:
> [1] stats graphics  grDevices utils datasets  methods   base
> 
> loaded via a namespace (and not attached):
> [1] compiler_4.3.0
>> capabilities()
> jpeg png    tiff   tcltk X11    aqua    
>http/ftp
> TRUE    TRUE    TRUE    TRUE    TRUE    TRUE  
>  TRUE
>  sockets  libxml    fifo  cledit   iconv NLS  
> Rprof
> TRUE   FALSE    TRUE    TRUE    TRUE    TRUE  
>  TRUE
>  profmem   cairo ICU long.double libcurl
> TRUE    TRUE    TRUE    TRUE    TRUE
> 
>   Thank you.
> 
> best,
> 
> Ken
>    
>   
>    ___
>    Kenneth Knoblauch
>   Inserm U1208
>   Stem-cell and Brain Research Institute
>   18 avenue du Doyen Lépine
>   69500 Bron
>   France
>   tel: +33 (0)4 72 91 34 77
>   fax: +33 (0)4 72 91 34 61
>   portable: +33 (0)6 84 10 64 10
>   https://sbri.fr/public-profile/63/single-member/
>  
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Uwe Ligges





On 24.04.2023 14:41, Kenneth Knoblauch wrote:

Hi,

I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to upgrade 
to macOS 12 first because I was at 10 and my 2017 Intel Mac Air doesn't seem to 
be able to run later versions.  I was looking at the Mac binaries at the R for 
mac OS page and it looks like both links

big-sur-x86_64 and big-sur-arm64 lead to a page with header:

Index of /bin/macosx/big-sur-arm64

Is this just a heading error or is there a misdirect in the link?


Misdirect, simply replace arm64 by x86_64 in the link for now. I am sure 
Simon will fix it soon, too.


Best,
Uwe Ligges



The formalities:

sessionInfo()
R version 4.3.0 (2023-04-21)
Platform: x86_64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.6.5

Matrix products: default
BLAS:   
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
LAPACK: 
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
  LAPACK version 3.11.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: Europe/Paris
tzcode source: internal

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base

loaded via a namespace (and not attached):
[1] compiler_4.3.0

capabilities()

jpeg pngtiff   tcltk X11aqua
http/ftp
TRUETRUETRUETRUETRUETRUE
TRUE
 sockets  libxmlfifo  cledit   iconv NLS   
Rprof
TRUE   FALSETRUETRUETRUETRUE
TRUE
 profmem   cairo ICU long.double libcurl
TRUETRUETRUETRUETRUE

  Thank you.

best,

Ken
   
  
   ___

   Kenneth Knoblauch
  Inserm U1208
  Stem-cell and Brain Research Institute
  18 avenue du Doyen Lépine
  69500 Bron
  France
  tel: +33 (0)4 72 91 34 77
  fax: +33 (0)4 72 91 34 61
  portable: +33 (0)6 84 10 64 10
  https://sbri.fr/public-profile/63/single-member/
 
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[R-SIG-Mac] binaries for R 4.3 x86_64

2023-04-24 Thread Kenneth Knoblauch

Hi,

I am upgrading to R 4.3.  and trying to upgrade the packages.  I had to upgrade 
to macOS 12 first because I was at 10 and my 2017 Intel Mac Air doesn't seem to 
be able to run later versions.  I was looking at the Mac binaries at the R for 
mac OS page and it looks like both links

big-sur-x86_64 and big-sur-arm64 lead to a page with header:

Index of /bin/macosx/big-sur-arm64

Is this just a heading error or is there a misdirect in the link?

The formalities:

sessionInfo()
R version 4.3.0 (2023-04-21)
Platform: x86_64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.6.5

Matrix products: default
BLAS:   
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRblas.0.dylib
 
LAPACK: 
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib;
  LAPACK version 3.11.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: Europe/Paris
tzcode source: internal

attached base packages:
[1] stats graphics  grDevices utils datasets  methods   base 

loaded via a namespace (and not attached):
[1] compiler_4.3.0
> capabilities()
   jpeg pngtiff   tcltk X11aqua
http/ftp 
   TRUETRUETRUETRUETRUETRUE
TRUE 
sockets  libxmlfifo  cledit   iconv NLS   
Rprof 
   TRUE   FALSETRUETRUETRUETRUE
TRUE 
profmem   cairo ICU long.double libcurl 
   TRUETRUETRUETRUETRUE 

 Thank you.

best,

Ken
  
 
  ___
  Kenneth Knoblauch
 Inserm U1208
 Stem-cell and Brain Research Institute
 18 avenue du Doyen Lépine
 69500 Bron
 France
 tel: +33 (0)4 72 91 34 77
 fax: +33 (0)4 72 91 34 61
 portable: +33 (0)6 84 10 64 10
 https://sbri.fr/public-profile/63/single-member/

___
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Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

Re: [R-SIG-Mac] binaries for R 4.3 x86_64

[R-SIG-Mac] binaries for R 4.3 x86_64

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