Hi Manabu,
thanks for that!
I can see the discrete model allows 2 binaries. There is no implementation of a
3 binaries model as a pendant to corDISC, I guess?!
Cheers,
Franz
> Am 14.06.2016 um 11:17 schrieb Manabu Sakamoto <manabu.sakam...@gmail.com>:
>
> Hi Franz,
>
> It is implemented in BayesTraits
> (http://www.evolution.rdg.ac.uk/BayesTraits.html
> <http://www.evolution.rdg.ac.uk/BayesTraits.html>).
> I know it's not R, and it's a command line based program, so might take a
> while to get used to, but BayesTraits is really powerful (and it's Bayesian!)
>
> thanks,
> Manabu
>
> On 14 June 2016 at 09:58, mailbox Franz <f.k...@mailbox.org
> <mailto:f.k...@mailbox.org>> wrote:
> Hi everybody,
>
> does anyone know if the bayesian version of Pagels 94 Method of correlated
> binary traits is implemented in R somewhere?
> There is the corHMM package which implements a 3-state ML version of it, but
> I couldn’t find a Baysian version anywhere.
>
> So I search for a Bayesian version of a 2 or 3 binary state correlated
> evolution method (preferably in R).
>
> The Paper I refer to is:
>
> http://www.ncbi.nlm.nih.gov/pubmed/16685633
> <http://www.ncbi.nlm.nih.gov/pubmed/16685633>
>
> All the best,
> Franz
>
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> --
> Manabu Sakamoto, PhD
> manabu.sakam...@gmail.com <mailto:manabu.sakam...@gmail.com>
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