Re: [Rdkit-discuss] SimilarityMaps
Hi Serenia, Yep that fixed it! Thanks! Matthew On Fri, Feb 20, 2015 at 10:59 PM, Sereina sereina.rini...@gmail.com wrote: Hi Matthew, I think this is related to a previous mailing list item ( https://www.mail-archive.com/rdkit-discuss@lists.sourceforge.net/msg03528.html ). It has probably something to do with the bounding boxes (they get scaled during the map generation process). In the previous case it was enough to set bbox_inches='tight' when saving the image to solve the problem. I hope this helps. Best, Sereina On 21 Feb 2015, at 02:28, Matthew Lardy mla...@gmail.com wrote: Hi, I am having an issue with the python similaritymaps. I am only seeing a fraction of the molecule. Anyone else have this issue? Thanks in advance! Matthew -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
[Rdkit-discuss] SimilarityMaps
Hi, I am having an issue with the python similaritymaps. I am only seeing a fraction of the molecule. Anyone else have this issue? Thanks in advance! Matthew -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
Re: [Rdkit-discuss] SimilarityMaps
Hi Matthew, I think this is related to a previous mailing list item (https://www.mail-archive.com/rdkit-discuss@lists.sourceforge.net/msg03528.html). It has probably something to do with the bounding boxes (they get scaled during the map generation process). In the previous case it was enough to set bbox_inches='tight' when saving the image to solve the problem. I hope this helps. Best, Sereina On 21 Feb 2015, at 02:28, Matthew Lardy mla...@gmail.com wrote: Hi, I am having an issue with the python similaritymaps. I am only seeing a fraction of the molecule. Anyone else have this issue? Thanks in advance! Matthew -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss