[GitHub] spark pull request: [SPARK-14412.2] [ML] rename *RDDStorageLevel t...

[mengxr]

GitHub user mengxr opened a pull request:

https://github.com/apache/spark/pull/12803

[SPARK-14412.2] [ML] rename *RDDStorageLevel to *StorageLevel

## What changes were proposed in this pull request?

As discussed in #12660, this PR renames
* intermediateRDDStorageLevel -> intermediateStorageLevel
* finalRDDStorageLevel -> finalStorageLevel

The argument name in `ALS.train` will be addressed in SPARK-15027.

## How was this patch tested?

Existing unit tests.

You can merge this pull request into a Git repository by running:

$ git pull https://github.com/mengxr/spark SPARK-14412

Alternatively you can review and apply these changes as the patch at:

https://github.com/apache/spark/pull/12803.patch

To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:

This closes #12803


commit 9ffa4ea994743ab4d02e0e4bff03fbaa016d4d19
Author: Xiangrui Meng 
Date:   2016-04-30T05:49:00Z

rename storage level params in Scala

commit 55721c5eacc31c64fb5c826d7f098c542676b20f
Author: Xiangrui Meng 
Date:   2016-04-30T05:52:16Z

rename storage level params in Python




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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[asfgit]

Github user asfgit closed the pull request at:

https://github.com/apache/spark/pull/11550


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[GitHub] spark pull request: [SPARK-14653] [ML] Remove json4s from mllib-lo...

[rxin]

Github user rxin commented on a diff in the pull request:

https://github.com/apache/spark/pull/12802#discussion_r61665580
  
--- Diff: 
mllib/src/main/scala/org/apache/spark/ml/linalg/VectorEncoder.scala ---
@@ -0,0 +1,62 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.apache.spark.ml.linalg
+
+import org.json4s.DefaultFormats
+import org.json4s.JsonDSL._
+import org.json4s.jackson.JsonMethods.{compact, parse => parseJson, render}
+
+private[ml] object VectorEncoder {
--- End diff --

this sounds like the Encoder from SQL. Can we name it like 
JsonVectorConverter?



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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[rxin]

Github user rxin commented on the pull request:

https://github.com/apache/spark/pull/11550#issuecomment-215940489
  
Thanks - merging in master!



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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

[asfgit]

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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

[rxin]

Github user rxin commented on the pull request:

https://github.com/apache/spark/pull/12796#issuecomment-215940373
  
Thanks - merging in master.



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[GitHub] spark pull request: [SPARK-14830][SQL] Add RemoveRepetitionFromGro...

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[GitHub] spark pull request: [SPARK-15026] [SQL] Disallow Dropping Multi Pa...

[gatorsmile]

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https://github.com/apache/spark/pull/12801#issuecomment-215940205
  
cc @yhuai @andrewor14 @rxin 


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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

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[GitHub] spark pull request: [SPARK-15026] [SQL] Disallow Dropping Multi Pa...

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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

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[GitHub] spark pull request: [SPARK-15026] [SQL] Disallow Dropping Multi Pa...

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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

[cloud-fan]

Github user cloud-fan commented on the pull request:

https://github.com/apache/spark/pull/12399#issuecomment-215940097
  
retest this please.


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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

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 * This patch passes all tests.
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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

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[GitHub] spark pull request: [SPARK-14757][SQL] Fix nullability bug in Equa...

[asfgit]

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[GitHub] spark pull request: [SPARK-14757][SQL] Corrected doGenCode() in Eq...

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[GitHub] spark pull request: [SPARK-14757][SQL] Fix nullability bug in Equa...

[davies]

Github user davies commented on the pull request:

https://github.com/apache/spark/pull/12799#issuecomment-215939602
  
LGTM, 
Merging this into master, thanks!


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-14127][SQL][WIP] Describe table

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[SparkQA]

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 * This patch passes all tests.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-14653] [ML] Remove json4s from mllib-lo...

[SparkQA]

Github user SparkQA commented on the pull request:

https://github.com/apache/spark/pull/12802#issuecomment-215938754
  
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[GitHub] spark pull request: [SPARK-14412][ML][PYSPARK] Add StorageLevel pa...

[asfgit]

Github user asfgit closed the pull request at:

https://github.com/apache/spark/pull/12660


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[GitHub] spark pull request: [SPARK-14412][ML][PYSPARK] Add StorageLevel pa...

[mengxr]

Github user mengxr commented on the pull request:

https://github.com/apache/spark/pull/12660#issuecomment-215938663
  
I'm merging this one in. I will send a follow-up PR to rename the params 
and update `ALS.train`. Thanks!


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[GitHub] spark pull request: [SPARK-14653] [ML] Remove json4s from mllib-lo...

[mengxr]

GitHub user mengxr opened a pull request:

https://github.com/apache/spark/pull/12802

[SPARK-14653] [ML] Remove json4s from mllib-local

## What changes were proposed in this pull request?

This PR moves Vector.toJson/fromJson to ml.linalg.VectorEncoder under 
mllib/ to keep mllib-local's dependency minimal. The json encoding is used by 
Params. So we still need this feature in SPARK-14615, where we will switch to 
ml.linalg in spark.ml APIs.

## How was this patch tested?

Copied existing unit tests over.

cc; @dbtsai 

You can merge this pull request into a Git repository by running:

$ git pull https://github.com/mengxr/spark SPARK-14653

Alternatively you can review and apply these changes as the patch at:

https://github.com/apache/spark/pull/12802.patch

To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:

This closes #12802


commit f1b83a9bb7532949c1dfdb9f25798fb5b6ea3fa1
Author: Xiangrui Meng 
Date:   2016-04-30T04:43:03Z

move Vector.toJson/fromJson to ml.linalg.VectorEncoder under mllib




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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[SparkQA]

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https://github.com/apache/spark/pull/11550#issuecomment-215937976
  
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 * This patch **fails Spark unit tests**.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-7424] [ML] ML ClassificationModel shoul...

[yanboliang]

Github user yanboliang commented on a diff in the pull request:

https://github.com/apache/spark/pull/12066#discussion_r61664866
  
--- Diff: 
mllib/src/main/scala/org/apache/spark/ml/classification/Classifier.scala ---
@@ -62,6 +92,14 @@ abstract class Classifier[
   /** @group setParam */
   def setRawPredictionCol(value: String): E = set(rawPredictionCol, 
value).asInstanceOf[E]
 
+  override def fit(dataset: Dataset[_]): M = {
+// This handles a few items such as schema validation.
+// Developers only need to implement train().
+transformSchema(dataset.schema, logging = true)
+copyValues(train(dataset).setParent(this))
+  .setPredictionMetadata(generatePredictionMetadata(dataset.schema))
--- End diff --

Make sense, I will update this PR soon.


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[GitHub] spark pull request: [SPARK-13786][ML][PYTHON] Removed save/load fo...

[jkbradley]

Github user jkbradley commented on the pull request:

https://github.com/apache/spark/pull/12782#issuecomment-215936477
  
Thanks!


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[GitHub] spark pull request: [SPARK-13786][ML][PYTHON] Removed save/load fo...

[jkbradley]

Github user jkbradley commented on a diff in the pull request:

https://github.com/apache/spark/pull/12782#discussion_r61664870
  
--- Diff: python/pyspark/ml/tests.py ---
@@ -44,8 +44,7 @@
 
 from pyspark import keyword_only
 from pyspark.ml import Estimator, Model, Pipeline, PipelineModel, 
Transformer
-from pyspark.ml.classification import (
-LogisticRegression, DecisionTreeClassifier, OneVsRest, OneVsRestModel)
+from pyspark.ml.classification import *
--- End diff --

There are ~5 imports, so I think it's worthwhile.


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[GitHub] spark pull request: [SPARK-7424] [ML] ML ClassificationModel shoul...

[yanboliang]

Github user yanboliang commented on the pull request:

https://github.com/apache/spark/pull/12066#issuecomment-215936327
  
@jkbradley Thanks for your comments. I will update this PR soon.


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[GitHub] spark pull request: [SPARKR][SPARK-14831]Make the SparkR MLlib API...

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[GitHub] spark pull request: [SPARKR][SPARK-14831]Make the SparkR MLlib API...

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[GitHub] spark pull request: [SPARKR][SPARK-14831]Make the SparkR MLlib API...

[SparkQA]

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https://github.com/apache/spark/pull/12789#issuecomment-215934813
  
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 * This patch passes all tests.
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 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-14637][SQL] object expressions cleanup

[SparkQA]

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https://github.com/apache/spark/pull/12399#issuecomment-215934261
  
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[GitHub] spark pull request: [SPARK-14917][SQL] Enable some ORC compression...

[HyukjinKwon]

Github user HyukjinKwon commented on the pull request:

https://github.com/apache/spark/pull/12699#issuecomment-215933980
  
@yhuai Sure. Thank you.


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[GitHub] spark pull request: [SPARK-14917][SQL] Enable some ORC compression...

[yhuai]

Github user yhuai commented on the pull request:

https://github.com/apache/spark/pull/12699#issuecomment-215933890
  
How about we do it a little bit later? Maybe that will introduce conflicts  
with prs from others.


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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

[andrewor14]

Github user andrewor14 commented on the pull request:

https://github.com/apache/spark/pull/12798#issuecomment-215933681
  
cool


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[GitHub] spark pull request: [SPARKR][SPARK-14831]Make the SparkR MLlib API...

[SparkQA]

Github user SparkQA commented on the pull request:

https://github.com/apache/spark/pull/12789#issuecomment-215933651
  
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[GitHub] spark pull request: [SPARK-14917][SQL] Enable some ORC compression...

[HyukjinKwon]

Github user HyukjinKwon commented on the pull request:

https://github.com/apache/spark/pull/12699#issuecomment-215933632
  
Thank you @yhuai! 
Actually, do you mind if I try to submit a PR after walking through 
sql/hive tests and remove the class imports where it is possible maybe? I won't 
if there is any possible problem with that (eg. difficult to review or easy to 
make a conflict..)


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[GitHub] spark pull request: [SPARK-14917][SQL] Enable some ORC compression...

[asfgit]

Github user asfgit closed the pull request at:

https://github.com/apache/spark/pull/12699


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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[SparkQA]

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 * This patch passes all tests.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

[SparkQA]

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[GitHub] spark pull request: [SPARK-14917][SQL] Enable some ORC compression...

[yhuai]

Github user yhuai commented on the pull request:

https://github.com/apache/spark/pull/12699#issuecomment-215933410
  
Cool. Thanks! lgtm


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[GitHub] spark pull request: [SPARK-15026] [SQL] Disallow Dropping Multi Pa...

[SparkQA]

Github user SparkQA commented on the pull request:

https://github.com/apache/spark/pull/12801#issuecomment-215933388
  
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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

[yhuai]

Github user yhuai commented on the pull request:

https://github.com/apache/spark/pull/12796#issuecomment-215933370
  
I have reverted the parser change. Since `CatalystSqlParser` always has 
reserved keywords, let's decide if we want to expand the list of non reserved 
keywords in future. 

It's still good to only have a single parser to avoid any potential 
confusion. 


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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[AmplabJenkins]

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[GitHub] spark pull request: [SPARK-15026] [SQL] Disallow Dropping Multi Pa...

[gatorsmile]

GitHub user gatorsmile opened a pull request:

https://github.com/apache/spark/pull/12801

[SPARK-15026] [SQL] Disallow Dropping Multi Partitions By a Single Alter 
Table DDL Command

 What changes were proposed in this pull request?
Currently, we are allowed to drop multiple partitions using a single DDL 
command: Alter Table Drop Partition. However, the internal implementation could 
break atomicity. That means, we could drop a subset of qualified partitions.

This PR disallows dropping multiple partitions by a single command. 

 How was this patch tested?
Modified the existing test cases and added new test cases. 

You can merge this pull request into a Git repository by running:

$ git pull https://github.com/gatorsmile/spark banDropMultiPart

Alternatively you can review and apply these changes as the patch at:

https://github.com/apache/spark/pull/12801.patch

To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:

This closes #12801


commit ddd0b2e788d0d2d0681cdfb4eea39c522d46e10e
Author: gatorsmile 
Date:   2016-04-29T06:54:33Z

initial fix.

commit 980b51eae9458a19b8b186ff352dbe67265aa0e6
Author: gatorsmile 
Date:   2016-04-29T06:56:07Z

initial fix.

commit 524d5a40e61de4c4f9d84988b91eb1a41d9e0bdd
Author: gatorsmile 
Date:   2016-04-29T23:55:37Z

Merge remote-tracking branch 'upstream/master' into banDropMultiPart

commit b0e19c48b612f919364f35eb0325aab28a26c5ea
Author: gatorsmile 
Date:   2016-04-29T23:55:47Z

Merge remote-tracking branch 'upstream/master' into banDropMultiPart

commit 6272398e7ac97039a21b79a7361cca0d8250261f
Author: gatorsmile 
Date:   2016-04-30T03:50:22Z

fixed test cases




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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[SparkQA]

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 * This patch passes all tests.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-14757][SQL] Fix nullability bug in Equa...

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[GitHub] spark pull request: [SPARK-14757][SQL] Fix nullability bug in Equa...

[SparkQA]

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 * This patch passes all tests.
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 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-15024] NoClassDefFoundError in spark-ex...

[HyukjinKwon]

Github user HyukjinKwon commented on the pull request:

https://github.com/apache/spark/pull/12800#issuecomment-215932736
  
(It looks the last part of the title is truncated)


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

[cloud-fan]

Github user cloud-fan commented on the pull request:

https://github.com/apache/spark/pull/12640#issuecomment-215932443
  
retest this please.


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

[AmplabJenkins]

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https://github.com/apache/spark/pull/12640#issuecomment-215932258
  
Merged build finished. Test FAILed.


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

[SparkQA]

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 * This patch **fails MiMa tests**.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

[SparkQA]

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[GitHub] spark pull request: [SPARK-13786][ML][PYTHON] Removed save/load fo...

[asfgit]

Github user asfgit closed the pull request at:

https://github.com/apache/spark/pull/12782


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[GitHub] spark pull request: [SPARK-13786][ML][PYTHON] Removed save/load fo...

[mengxr]

Github user mengxr commented on the pull request:

https://github.com/apache/spark/pull/12782#issuecomment-215931884
  
Merged into master. Thanks!


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

[mengxr]

Github user mengxr commented on the pull request:

https://github.com/apache/spark/pull/12640#issuecomment-215931603
  
LGTM pending Jenkins


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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

[asfgit]

Github user asfgit closed the pull request at:

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[GitHub] spark pull request: [SPARK-13667][SQL] Support for specifying cust...

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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

[asfgit]

Github user asfgit closed the pull request at:

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[GitHub] spark pull request: [SPARK-14127][SQL][WIP] Describe table

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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

[yhuai]

Github user yhuai commented on the pull request:

https://github.com/apache/spark/pull/12798#issuecomment-215931164
  
OK I am merging this to master.


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[GitHub] spark pull request: [SPARK-14850][ML] convert primitive array from...

[cloud-fan]

Github user cloud-fan commented on the pull request:

https://github.com/apache/spark/pull/12640#issuecomment-215930973
  
retest this please.


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[GitHub] spark pull request: [SPARK-14143] Options for parsing NaNs, Infini...

[AmplabJenkins]

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[GitHub] spark pull request: [SPARK-14143] Options for parsing NaNs, Infini...

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https://github.com/apache/spark/pull/11947#issuecomment-215930751
  
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 * This patch passes all tests.
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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

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 * This patch passes all tests.
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[GitHub] spark pull request: [SPARK-15012][SQL] Simplify configuration API ...

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 * This patch passes all tests.
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[GitHub] spark pull request: [SPARK-14951][SQL] Support subexpression elimi...

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[GitHub] spark pull request: [SPARK-15022][SPARK-15023] Add support for tes...

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[GitHub] spark pull request: [SPARK-14951][SQL] Support subexpression elimi...

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[GitHub] spark pull request: [SPARK-14951][SQL] Support subexpression elimi...

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[GitHub] spark pull request: [SPARK-14591] [SQL] Remove DataTypeParser and ...

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 * This patch **fails Spark unit tests**.
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