[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
Thanks for your effort @shaneknapp. I just checked the green.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
nvm...  i checked the last successful build and it took ~90 mins.

On Mon, Aug 21, 2017 at 5:08 PM, shane knapp ☠  
wrote:

> hmm.  the build seems to be hanging:
>
> INFO-  Cleaning site directory
> INFO-  Building documentation to directory: 
/home/jenkins/workspace/spark-master-docs/spark/sql/site
> Moving back into docs dir.
> Making directory api/sql
> cp -r ../sql/site/. api/sql
> Source: /home/jenkins/workspace/spark-master-docs/spark/docs
>Destination: 
/home/jenkins/workspace/spark-master-docs/spark/docs/_site
>   Generating...
> done.
>  Auto-regeneration: disabled. Use --watch to enable.
> Copying release documentation to 
/home//public_html/spark-nightly/spark-master-docs/spark-2.3.0-SNAPSHOT-2017_08_21_16_25-84b5b16-docs
>
>
> On Mon, Aug 21, 2017 at 4:36 PM, shane knapp ☠ 
> wrote:
>
>> building now:
>> https://amplab.cs.berkeley.edu/jenkins/job/spark-master-docs/3594/console
>>
>> On Mon, Aug 21, 2017 at 4:30 PM, Hyukjin Kwon 
>> wrote:
>>
>>> Nice! Thank you so much @shaneknapp !
>>>
>>> —
>>> You are receiving this because you were mentioned.
>>> Reply to this email directly, view it on GitHub
>>> , or 
mute
>>> the thread
>>> 

>>> .
>>>
>>
>>
>



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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
hmm.  the build seems to be hanging:

INFO-  Cleaning site directory
INFO-  Building documentation to directory:
/home/jenkins/workspace/spark-master-docs/spark/sql/site
Moving back into docs dir.
Making directory api/sql
cp -r ../sql/site/. api/sql
Source: /home/jenkins/workspace/spark-master-docs/spark/docs
   Destination: 
/home/jenkins/workspace/spark-master-docs/spark/docs/_site
  Generating...
done.
 Auto-regeneration: disabled. Use --watch to enable.
Copying release documentation to

/home//public_html/spark-nightly/spark-master-docs/spark-2.3.0-SNAPSHOT-2017_08_21_16_25-84b5b16-docs


On Mon, Aug 21, 2017 at 4:36 PM, shane knapp ☠  
wrote:

> building now:
> https://amplab.cs.berkeley.edu/jenkins/job/spark-master-docs/3594/console
>
> On Mon, Aug 21, 2017 at 4:30 PM, Hyukjin Kwon 
> wrote:
>
>> Nice! Thank you so much @shaneknapp !
>>
>> —
>> You are receiving this because you were mentioned.
>> Reply to this email directly, view it on GitHub
>> , or 
mute
>> the thread
>> 

>> .
>>
>
>



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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
building now:
https://amplab.cs.berkeley.edu/jenkins/job/spark-master-docs/3594/console

On Mon, Aug 21, 2017 at 4:30 PM, Hyukjin Kwon 
wrote:

> Nice! Thank you so much @shaneknapp !
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> , or 
mute
> the thread
> 

> .
>



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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
Nice! Thank you so much @shaneknapp!


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
done:

```
TASK [jenkins-worker : Install anaconda python packages via pip] 
***
ok: [amp-jenkins-staging-worker-02.amp] => (item=discover)
ok: [amp-jenkins-staging-worker-01.amp] => (item=discover)
ok: [amp-jenkins-staging-worker-02.amp] => (item=fabric)
ok: [amp-jenkins-staging-worker-01.amp] => (item=fabric)
ok: [amp-jenkins-staging-worker-02.amp] => (item=findspark)
ok: [amp-jenkins-staging-worker-01.amp] => (item=findspark)
ok: [amp-jenkins-staging-worker-02.amp] => (item=flatbuffers)
ok: [amp-jenkins-staging-worker-01.amp] => (item=flatbuffers)
changed: [amp-jenkins-staging-worker-01.amp] => (item=mkdocs)
changed: [amp-jenkins-staging-worker-02.amp] => (item=mkdocs)
ok: [amp-jenkins-staging-worker-02.amp] => (item=subprocess32)
ok: [amp-jenkins-staging-worker-01.amp] => (item=subprocess32)
```


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
okie dokie.  installing mkdocs now.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
Here is the context I got:

https://github.com/apache/spark/pull/18702 broke the documentation build in 
https://amplab.cs.berkeley.edu/jenkins/job/spark-master-docs/.

```
...
Moving back into docs dir.
Moving to SQL directory and building docs.
Missing mkdocs in your path, skipping SQL documentation generation.
Moving back into docs dir.
Making directory api/sql
cp -r ../sql/site/. api/sql
jekyll 2.5.3 | Error:  unknown file type: ../sql/site/.
Deleting credential directory 
/home/jenkins/workspace/spark-master-docs/spark-utils/new-release-scripts/jenkins/jenkins-credentials-scUXuITy
Build step 'Execute shell' marked build as failure
[WS-CLEANUP] Deleting project workspace...[WS-CLEANUP] done
Finished: FAILURE
```

It failed in this way roughly about 20ish days.

That PR adds SQL documentation build but with the dependency, `mkdocs` 
package. I completely forgot we actually build it in Jenkins.

To fix this, in this PR, I manually added some install command here to 
install `mkdocs` if missing in the path; however, it looks failed to install 
this with the error message:

```
...
Installing collected packages: singledispatch, certifi, backports-abc, 
tornado, livereload, click, Markdown, mkdocs
Exception:
Traceback (most recent call last):
  File "/home/anaconda/lib/python2.7/site-packages/pip/basecommand.py", 
line 215, in main
status = self.run(options, args)
  File 
"/home/anaconda/lib/python2.7/site-packages/pip/commands/install.py", line 342, 
in run
prefix=options.prefix_path,
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_set.py", 
line 784, in install
**kwargs
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", 
line 851, in install
self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", 
line 1064, in move_wheel_files
isolated=self.isolated,
  File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 345, 
in move_wheel_files
clobber(source, lib_dir, True)
  File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 323, 
in clobber
shutil.copyfile(srcfile, destfile)
  File "/home/anaconda/lib/python2.7/shutil.py", line 83, in copyfile
with open(dst, 'wb') as fdst:
IOError: [Errno 13] Permission denied: 
'/home/anaconda/lib/python2.7/site-packages/singledispatch_helpers.pyc
...
```

It has failed in this way roughly about 1 day.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[shaneknapp]

Github user shaneknapp commented on the issue:

https://github.com/apache/spark/pull/18984
  
how long has this been failing in this way?  i'll take a closer look
tomorrow afternoon.

On Sun, Aug 20, 2017 at 4:31 AM, Hyukjin Kwon 
wrote:

> It looks still failed during mkdocs installation -
> https://amplab.cs.berkeley.edu/jenkins/job/spark-master-
> docs/3588/consoleFull
>
> Missing mkdocs in your path, trying to install mkdocs for SQL 
documentation generation.
> Collecting mkdocs
>   Downloading mkdocs-0.16.3-py2.py3-none-any.whl (1.2MB)
> Collecting livereload>=2.5.1 (from mkdocs)
>   Downloading livereload-2.5.1-py2-none-any.whl
> Requirement already satisfied: Jinja2>=2.7.1 in 
/home/anaconda/lib/python2.7/site-packages (from mkdocs)
> Collecting click>=3.3 (from mkdocs)
>   Downloading click-6.7-py2.py3-none-any.whl (71kB)
> Collecting Markdown>=2.3.1 (from mkdocs)
>   Downloading Markdown-2.6.9.tar.gz (271kB)
> Requirement already satisfied: PyYAML>=3.10 in 
/home/anaconda/lib/python2.7/site-packages (from mkdocs)
> Collecting tornado>=4.1 (from mkdocs)
>   Downloading tornado-4.5.1.tar.gz (483kB)
> Requirement already satisfied: six in 
/home/anaconda/lib/python2.7/site-packages (from livereload>=2.5.1->mkdocs)
> Collecting singledispatch (from tornado>=4.1->mkdocs)
>   Downloading singledispatch-3.4.0.3-py2.py3-none-any.whl
> Collecting certifi (from tornado>=4.1->mkdocs)
>   Downloading certifi-2017.7.27.1-py2.py3-none-any.whl (349kB)
> Collecting backports_abc>=0.4 (from tornado>=4.1->mkdocs)
>   Downloading backports_abc-0.5-py2.py3-none-any.whl
> Building wheels for collected packages: Markdown, tornado
>   Running setup.py bdist_wheel for Markdown: started
>   Running setup.py bdist_wheel for Markdown: finished with status 'done'
>   Stored in directory: 
/home/jenkins/.cache/pip/wheels/bf/46/10/c93e17ae86ae3b3a919c7b39dad3b5ccf09aeb066419e5c1e5
>   Running setup.py bdist_wheel for tornado: started
>   Running setup.py bdist_wheel for tornado: finished with status 'done'
>   Stored in directory: 
/home/jenkins/.cache/pip/wheels/84/83/cd/6a04602633457269d161344755e6766d24307189b7a67ff4b7
> Successfully built Markdown tornado
> Installing collected packages: singledispatch, certifi, backports-abc, 
tornado, livereload, click, Markdown, mkdocs
> Exception:
> Traceback (most recent call last):
>   File "/home/anaconda/lib/python2.7/site-packages/pip/basecommand.py", 
line 215, in main
> status = self.run(options, args)
>   File 
"/home/anaconda/lib/python2.7/site-packages/pip/commands/install.py", line 342, 
in run
> prefix=options.prefix_path,
>   File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_set.py", 
line 784, in install
> **kwargs
>   File 
"/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", line 851, 
in install
> self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
>   File 
"/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", line 1064, 
in move_wheel_files
> isolated=self.isolated,
>   File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 
345, in move_wheel_files
> clobber(source, lib_dir, True)
>   File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 
323, in clobber
> shutil.copyfile(srcfile, destfile)
>   File "/home/anaconda/lib/python2.7/shutil.py", line 83, in copyfile
> with open(dst, 'wb') as fdst:
> IOError: [Errno 13] Permission denied: 
'/home/anaconda/lib/python2.7/site-packages/singledispatch_helpers.pyc
> ...
>
> but I believe the fix itself is still okay and no need to revert.
>
> Hi @shaneknapp , I *guess* we could simply
> install this by sudo pip install mkdocs without a close look. Maybe,
> would you please be able to check this and install mkdocs package for SQL
> documentation build?
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> , or 
mute
> the thread
> 

> .
>



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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
It looks still failed during mkdocs installation - 
https://amplab.cs.berkeley.edu/jenkins/job/spark-master-docs/3588/consoleFull

```
Missing mkdocs in your path, trying to install mkdocs for SQL documentation 
generation.
Collecting mkdocs
  Downloading mkdocs-0.16.3-py2.py3-none-any.whl (1.2MB)
Collecting livereload>=2.5.1 (from mkdocs)
  Downloading livereload-2.5.1-py2-none-any.whl
Requirement already satisfied: Jinja2>=2.7.1 in 
/home/anaconda/lib/python2.7/site-packages (from mkdocs)
Collecting click>=3.3 (from mkdocs)
  Downloading click-6.7-py2.py3-none-any.whl (71kB)
Collecting Markdown>=2.3.1 (from mkdocs)
  Downloading Markdown-2.6.9.tar.gz (271kB)
Requirement already satisfied: PyYAML>=3.10 in 
/home/anaconda/lib/python2.7/site-packages (from mkdocs)
Collecting tornado>=4.1 (from mkdocs)
  Downloading tornado-4.5.1.tar.gz (483kB)
Requirement already satisfied: six in 
/home/anaconda/lib/python2.7/site-packages (from livereload>=2.5.1->mkdocs)
Collecting singledispatch (from tornado>=4.1->mkdocs)
  Downloading singledispatch-3.4.0.3-py2.py3-none-any.whl
Collecting certifi (from tornado>=4.1->mkdocs)
  Downloading certifi-2017.7.27.1-py2.py3-none-any.whl (349kB)
Collecting backports_abc>=0.4 (from tornado>=4.1->mkdocs)
  Downloading backports_abc-0.5-py2.py3-none-any.whl
Building wheels for collected packages: Markdown, tornado
  Running setup.py bdist_wheel for Markdown: started
  Running setup.py bdist_wheel for Markdown: finished with status 'done'
  Stored in directory: 
/home/jenkins/.cache/pip/wheels/bf/46/10/c93e17ae86ae3b3a919c7b39dad3b5ccf09aeb066419e5c1e5
  Running setup.py bdist_wheel for tornado: started
  Running setup.py bdist_wheel for tornado: finished with status 'done'
  Stored in directory: 
/home/jenkins/.cache/pip/wheels/84/83/cd/6a04602633457269d161344755e6766d24307189b7a67ff4b7
Successfully built Markdown tornado
Installing collected packages: singledispatch, certifi, backports-abc, 
tornado, livereload, click, Markdown, mkdocs
Exception:
Traceback (most recent call last):
  File "/home/anaconda/lib/python2.7/site-packages/pip/basecommand.py", 
line 215, in main
status = self.run(options, args)
  File 
"/home/anaconda/lib/python2.7/site-packages/pip/commands/install.py", line 342, 
in run
prefix=options.prefix_path,
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_set.py", 
line 784, in install
**kwargs
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", 
line 851, in install
self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
  File "/home/anaconda/lib/python2.7/site-packages/pip/req/req_install.py", 
line 1064, in move_wheel_files
isolated=self.isolated,
  File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 345, 
in move_wheel_files
clobber(source, lib_dir, True)
  File "/home/anaconda/lib/python2.7/site-packages/pip/wheel.py", line 323, 
in clobber
shutil.copyfile(srcfile, destfile)
  File "/home/anaconda/lib/python2.7/shutil.py", line 83, in copyfile
with open(dst, 'wb') as fdst:
IOError: [Errno 13] Permission denied: 
'/home/anaconda/lib/python2.7/site-packages/singledispatch_helpers.pyc
...
```

but I believe the fix itself is still okay and no need to revert.

Hi @shaneknapp, I _guess_ we could simply install this by `sudo pip install 
mkdocs` without a close look. Maybe, would you please be able to check this and 
install `mkdocs` package for SQL documentation build?


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
Merged to master.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
Let me merge this one and see if the doc build passes.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[AmplabJenkins]

Github user AmplabJenkins commented on the issue:

https://github.com/apache/spark/pull/18984
  
Test PASSed.
Refer to this link for build results (access rights to CI server needed): 
https://amplab.cs.berkeley.edu/jenkins//job/SparkPullRequestBuilder/80819/
Test PASSed.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[AmplabJenkins]

Github user AmplabJenkins commented on the issue:

https://github.com/apache/spark/pull/18984
  
Merged build finished. Test PASSed.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[SparkQA]

Github user SparkQA commented on the issue:

https://github.com/apache/spark/pull/18984
  
**[Test build #80819 has 
finished](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/80819/testReport)**
 for PR 18984 at commit 
[`57abb1f`](https://github.com/apache/spark/commit/57abb1fa732385a9092900c89402ad4013a94fee).
 * This patch passes all tests.
 * This patch merges cleanly.
 * This patch adds no public classes.


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[SparkQA]

Github user SparkQA commented on the issue:

https://github.com/apache/spark/pull/18984
  
**[Test build #80819 has 
started](https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/80819/testReport)**
 for PR 18984 at commit 
[`57abb1f`](https://github.com/apache/spark/commit/57abb1fa732385a9092900c89402ad4013a94fee).


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[GitHub] spark issue #18984: [SPARK-21773][BUILD][DOCS] Installs mkdocs if missing in...

[HyukjinKwon]

Github user HyukjinKwon commented on the issue:

https://github.com/apache/spark/pull/18984
  
cc @jkbradley and @srowen. Would you have some time to take a look for this 
one?


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