Hi,

I became interested in SAGE after I found it to be the easiest way to
install cddlib and gmp, and now I am getting hooked.  My research is
very schizophrenic: besides some computational algebra/geometry coming
from dynamical systems, I am also interested in mathematical biology
and bioinformatics.  There is an open-source project called biopython
(http://biopython.org/wiki/Biopython) that I am using in a
bioinformatics course right now. It would be very nice if there was a
biopython optional package for SAGE.  I am willing to try and create
one, but I thought I would post here first to see if anyone had any
preliminary advice before I waste my time.

Biopython currently requires Numeric, but all the parts I need seem to
work OK using numpy.  The developers are currently working on
switching over entirely to numpy.  It also requires something called
mxTextTools, but I think that should be OK since its open source and
has a very permissive license.

Cheers,
Marshall Hampton


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