Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-10 Thread Justin C. Walker

On Apr 8, 2012, at 06:01 , William Stein wrote:

> On Sun, Apr 8, 2012 at 2:12 AM, Francis Clarke
>  wrote:
>> 
>> 
>> On Friday, 6 April 2012 23:21:45 UTC+1, William wrote:
>>> 
>>> Hi,
>>> 
>>> There is exactly one test failure in running the full "make ptestlong"
>>> test suite after a clean build of Sage on OS X 10.7!  It's in Polybori
>> 
> 
> I just built on a "clean" 2009 Macbook Air with updated OS X 10.7.3
> and the latest XCode, and it took 291 minutes, built fine, and passed
> absolutely *all* tests (including polybori).

I tried sage-b13-lion, and the build blew up at the ECM package (I'll send the 
log to Jeroen).  I don't mind making the requirement that, for 10.7, the user 
must upgrade to 10.7.3/Xcode 4.3[.?]; but, personally, I can't make that move 
until I have a better understanding of the implications for my files and "the 
cloud".

I think that is the one potential gotcha in making the requirement, but it is 
necessary, given the poor state of the initial releases of the OS and Xcode.

The amount of effort that Sage developers have expended on this is impressive, 
and a credit to the team.  If this works as well as it seems, I think it's high 
time to move on.

Justin

--
Justin C. Walker, Curmudgeon at Large
Institute for the Absorption of Federal Funds
---
I want to die, peacefully in my sleep, like my grandfather;
not screaming in terror, like his passengers.




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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-09 Thread Jeroen Demeyer
For those who can't install MPIR, please try the new spkg from #11616:

./sage -f
http://boxen.math.washington.edu/home/jdemeyer/spkg/mpir-2.4.0.p2.spkg

and send me spkg/logs/mpir-2.4.0.p2.log
(regardless of whether the install succeeded)

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-09 Thread Jeroen Demeyer
On 2012-04-06 17:01, William Stein wrote:
> For me it fails much earlier:
> 
> checking for x86_64-apple-darwin11.3.0-gcc...
> /Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/./gcc/xgcc
> -B/Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/./gcc/
> -B/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/bin/
> -B/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/lib/
> -isystem 
> /Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/include
> -isystem 
> /Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/sys-include
> checking for suffix of object files... configure: error: in
> `/Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/x86_64-apple-darwin11.3.0/libgcc':
> configure: error: cannot compute suffix of object files: cannot compile
> See `config.log' for more details.
> make[4]: *** [configure-stage1-target-libgcc] Error 1
> make[3]: *** [stage1-bubble] Error 2
> make[2]: *** [all] Error 2

William, could you please post the output of the following commands on
that system:

$ which cc
$ which gcc
$ which clang
$ cc --version
$ gcc --version
$ clang --version

A fix for this problem should be #12820.

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-08 Thread Jeroen Demeyer
On 2012-04-08 15:01, William Stein wrote:
> On Sun, Apr 8, 2012 at 2:12 AM, Francis Clarke
>  wrote:
>>
>>
>> On Friday, 6 April 2012 23:21:45 UTC+1, William wrote:
>>>
>>> Hi,
>>>
>>> There is exactly one test failure in running the full "make ptestlong"
>>> test suite after a clean build of Sage on OS X 10.7!  It's in Polybori
>>
> 
> I just built on a "clean" 2009 Macbook Air with updated OS X 10.7.3
> and the latest XCode, and it took 291 minutes, built fine, and passed
> absolutely *all* tests (including polybori).
As far as I can tell, there are currently some problems on OS X 10.7
with older versions of XCode, but newer versions seem to work well.
Except some development in the coming betas.

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-08 Thread William Stein
On Sun, Apr 8, 2012 at 2:12 AM, Francis Clarke
 wrote:
>
>
> On Friday, 6 April 2012 23:21:45 UTC+1, William wrote:
>>
>> Hi,
>>
>> There is exactly one test failure in running the full "make ptestlong"
>> test suite after a clean build of Sage on OS X 10.7!  It's in Polybori
>

I just built on a "clean" 2009 Macbook Air with updated OS X 10.7.3
and the latest XCode, and it took 291 minutes, built fine, and passed
absolutely *all* tests (including polybori).

 -- William

> On my MacBook Pro [OS 10.7.3, 2.66 GHz Intel Core 2 Duo, 4 GB] it built fine
> (after 12 hours), and "make ptestlong" gave rise to no failures at all.  In
> particular,
>
> sage -t --long -force_lib "devel/sage/sage/rings/polynomial/pbori.pyx"
> [7.0 s]
>
> --
> All tests passed!
> Total time for all tests: 7.0 seconds
>
> Francis Clarke
>
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-- 
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Professor of Mathematics
University of Washington
http://wstein.org

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-08 Thread Francis Clarke


On Friday, 6 April 2012 23:21:45 UTC+1, William wrote:
>
> Hi,
>
> There is exactly one test failure in running the full "make ptestlong"
> test suite after a clean build of Sage on OS X 10.7!  It's in Polybori
>
On my MacBook Pro [OS 10.7.3, 2.66 GHz Intel Core 2 Duo, 4 GB] it built 
fine (after 12 hours), and "make ptestlong" gave rise to no failures at 
all.  In particular,

sage -t --long -force_lib "devel/sage/sage/rings/polynomial/pbori.pyx"
 [7.0 s]
 
--
All tests passed!
Total time for all tests: 7.0 seconds

Francis Clarke

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[sage-devel] Re: OS X 10.7 testers needed

2012-04-07 Thread Bruce Cohen
I tried again with CC-clang and it fails at
make[1]: *** [installed/mpir-2.1.3.p10] Error 1

Here are pointers to logs:
http://sage.math.washington.edu/home/bic/sage-5.0.beta12-gcc/tail-100-install.log
http://sage.math.washington.edu/home/bic/sage-5.0.beta12-gcc/head-100-install.log
http://sage.math.washington.edu/home/bic/sage-5.0.beta12-gcc/install.log
http://sage.math.washington.edu/home/bic/sage-5.0.beta12-gcc/mpir-2.1.3.p10.log

Thanks.

-Bruce

On Apr 6, 8:49 am, Jeroen Demeyer  wrote:
> On 2012-04-06 17:01, William Stein wrote:> On Thu, Apr 5, 2012 at 9:34 PM, 
> Bruce Cohen  wrote:
> >> I ran a make last night, but it did not work.  I'm attaching
>
> > For me it fails much earlier:
>
> Please try
>
> $ export CC=clang
> $ make
>
> and report whether that works.

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-06 Thread William Stein
Hi,

There is exactly one test failure in running the full "make ptestlong"
test suite after a clean build of Sage on OS X 10.7!  It's in Polybori
(see below).  That's it.  Absolutely everything else passes.  This
means the goal of getting Sage ported to 10.7 enough for the Sage-5.0
release is "99.99%" there.

sage -t  --long -force_lib devel/sage/sage/rings/polynomial/pbori.pyx
^[[?1034h**
File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/devel/sage-main/sage/rings/polynomial/pbori.pyx",
line 120:
sage: for f in I2.groebner_basis():
f
Exception raised:
Traceback (most recent call last):
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/ncadoctest.py",
line 1231, in run_one_test
self.run_one_example(test, example, filename, compileflags)
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/sagedoctest.py",
line 38, in run_one_example
OrigDocTestRunner.run_one_example(self, test, example,
filename, compileflags)
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/ncadoctest.py",
line 1172, in run_one_example
compileflags, 1) in test.globs
  File "", line 1, in 
for f in I2.groebner_basis():###line 120:
sage: for f in I2.groebner_basis():
  File "pbori.pyx", line 4852, in
sage.rings.polynomial.pbori.BooleanPolynomialIdeal.groebner_basis
(sage/rings/polynomial/pbori.cpp:28192)
sig_on()
RuntimeError: Aborted
**
File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/devel/sage-main/sage/rings/polynomial/pbori.pyx",
line 4839:
sage: I.groebner_basis()
Exception raised:
Traceback (most recent call last):
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/ncadoctest.py",
line 1231, in run_one_test
self.run_one_example(test, example, filename, compileflags)
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/sagedoctest.py",
line 38, in run_one_example
OrigDocTestRunner.run_one_example(self, test, example,
filename, compileflags)
  File 
"/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/bin/ncadoctest.py",
line 1172, in run_one_example
compileflags, 1) in test.globs
  File "", line 1, in 
I.groebner_basis()###line 4839:
sage: I.groebner_basis()
  File "pbori.pyx", line 4852, in
sage.rings.polynomial.pbori.BooleanPolynomialIdeal.groebner_basis
(sage/rings/polynomial/pbori.cpp:28192)
sig_on()
RuntimeError: Aborted



On Fri, Apr 6, 2012 at 12:32 PM, William Stein  wrote:
> On Fri, Apr 6, 2012 at 8:49 AM, Jeroen Demeyer  wrote:
>> On 2012-04-06 17:01, William Stein wrote:
>>> On Thu, Apr 5, 2012 at 9:34 PM, Bruce Cohen  wrote:
 I ran a make last night, but it did not work.  I'm attaching
>>>
>>> For me it fails much earlier:
>> Please try
>>
>> $ export CC=clang
>> $ make
>>
>> and report whether that works.
>
> It works!  The build completed fine, and I just ran the tests in
> libs/pari and they all passed.  I'm waiting for the docs to build and
> the rest of "make ptestlong" to run.
>
> William



-- 
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University of Washington
http://wstein.org

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-06 Thread William Stein
On Fri, Apr 6, 2012 at 8:49 AM, Jeroen Demeyer  wrote:
> On 2012-04-06 17:01, William Stein wrote:
>> On Thu, Apr 5, 2012 at 9:34 PM, Bruce Cohen  wrote:
>>> I ran a make last night, but it did not work.  I'm attaching
>>
>> For me it fails much earlier:
> Please try
>
> $ export CC=clang
> $ make
>
> and report whether that works.

It works!  The build completed fine, and I just ran the tests in
libs/pari and they all passed.  I'm waiting for the docs to build and
the rest of "make ptestlong" to run.

William

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-06 Thread Jeroen Demeyer
On 2012-04-06 17:01, William Stein wrote:
> On Thu, Apr 5, 2012 at 9:34 PM, Bruce Cohen  wrote:
>> I ran a make last night, but it did not work.  I'm attaching
> 
> For me it fails much earlier:
Please try

$ export CC=clang
$ make

and report whether that works.

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Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-06 Thread William Stein
On Thu, Apr 5, 2012 at 9:34 PM, Bruce Cohen  wrote:
> I ran a make last night, but it did not work.  I'm attaching

For me it fails much earlier:

checking for x86_64-apple-darwin11.3.0-gcc...
/Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/./gcc/xgcc
-B/Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/./gcc/
-B/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/bin/
-B/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/lib/
-isystem 
/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/include
-isystem 
/Users/wstein/sage/install/sage-5.0.beta12-gcc/local/x86_64-apple-darwin11.3.0/sys-include
checking for suffix of object files... configure: error: in
`/Users/wstein/sage/install/sage-5.0.beta12-gcc/spkg/build/gcc-4.6.3/gcc-build/x86_64-apple-darwin11.3.0/libgcc':
configure: error: cannot compute suffix of object files: cannot compile
See `config.log' for more details.
make[4]: *** [configure-stage1-target-libgcc] Error 1
make[3]: *** [stage1-bubble] Error 2
make[2]: *** [all] Error 2

real4m10.944s
user6m58.470s
sys 1m27.258s

Error installing package gcc-4.6.3

---

deep:sage-5.0.beta12-gcc wstein$ gcc --version
i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1 (Based on Apple Inc.
build 5658) (LLVM build 2335.15.00)
Copyright (C) 2007 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

See:

http://wstein.org/home/wstein/tmp/install-5.0.beta12-gcc.log

> config.log and an edited version of install.log.  The original
> install.log is too big to mail.   The error appears to be
> 
> Error installing package mpir-2.1.3.p10
> 
>
> If it would be helpful, I can do another run this weekend after you
> make some suggestions for getting this to work.
>
> Thanks
>
> -Bruce
>
> SAGE_CHECK=yes
> MAKE=make -j4
>
> gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.1.00)
>
> Mac OS X Lion 10.7.3 (11D50b)
> Processor  2.3 GHz Intel Core i5
>
> bash-3.2$ gcc -print-prog-name=as
> /Developer/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/as
> bash-3.2$ as --version
> FATAL:/Developer/usr/bin/../libexec/as/x86_64/as: I don't understand '-' flag!
>
>
>
> ---
>
>
> On Apr 3, 6:11 am, Jeroen Demeyer  wrote:
>> Could somebody with an OS X 10.7 machine please try to build the
>> following from source, preferably with SAGE_CHECK=yes:
>>
>> http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta1...
>
> --
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[sage-devel] Re: OS X 10.7 testers needed

2012-04-05 Thread Bruce Cohen
I ran a make last night, but it did not work.  I'm attaching
config.log and an edited version of install.log.  The original
install.log is too big to mail.   The error appears to be

Error installing package mpir-2.1.3.p10


If it would be helpful, I can do another run this weekend after you
make some suggestions for getting this to work.

Thanks

-Bruce

SAGE_CHECK=yes
MAKE=make -j4

gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.1.00)

Mac OS X Lion 10.7.3 (11D50b)
Processor  2.3 GHz Intel Core i5

bash-3.2$ gcc -print-prog-name=as
/Developer/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/as
bash-3.2$ as --version
FATAL:/Developer/usr/bin/../libexec/as/x86_64/as: I don't understand '-' flag!



---


On Apr 3, 6:11 am, Jeroen Demeyer  wrote:
> Could somebody with an OS X 10.7 machine please try to build the
> following from source, preferably with SAGE_CHECK=yes:
>
> http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta1...

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config.log
Description: Binary data


install.log-edited-down
Description: Binary data


Re: [sage-devel] Re: OS X 10.7 testers needed

2012-04-05 Thread William Stein
On Thu, Apr 5, 2012 at 7:23 AM, Jason Grout  wrote:
> On 4/3/12 8:11 AM, Jeroen Demeyer wrote:
>>
>> Could somebody with an OS X 10.7 machine please try to build the
>> following from source, preferably with SAGE_CHECK=yes:
>>
>>
>> http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta12-gcc/sage-5.0.beta12-gcc.tar
>>
>
>
> I have a student who is trying to build on 10.7 on a 2-year old laptop.

It may depend on the version of XCode he has installed.

>  Does he need to define SAGE_PORT=yes when trying to compile this version?

If it immediately fails, then obviously yes.

>  I assume he needs to use this version rather than the normal beta12, right?

I think he could build the normal beta12, but he would be testing
something completely different, right? (The normal one would likely
build, but fail a lot of tests due to compiler bugs, depending on
XCode version.) Jereon's specifically interested in having this
tarball tested.

william



> Thanks,
>
> Jason
>
>
>
> --
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[sage-devel] Re: OS X 10.7 testers needed

2012-04-05 Thread Jason Grout

On 4/3/12 8:11 AM, Jeroen Demeyer wrote:

Could somebody with an OS X 10.7 machine please try to build the
following from source, preferably with SAGE_CHECK=yes:

http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta12-gcc/sage-5.0.beta12-gcc.tar




I have a student who is trying to build on 10.7 on a 2-year old laptop. 
 Does he need to define SAGE_PORT=yes when trying to compile this 
version?  I assume he needs to use this version rather than the normal 
beta12, right?


Thanks,

Jason


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[sage-devel] Re: OS X 10.7 testers needed

2012-04-04 Thread bump
> > 10.7.3. But I think it's on the slowest oldest ibook that will run lion:-)
>
> Newer 10.7 OS on older system; I'm the reverse.  What does 'About This Mac' 
> say your processor is?

I am running 10.7.3 on a newer Macbook Pro (2.2 GHz i7) and I get a
build failure with 5.0beta1.

Like Justin, I have a configure error building MPIR:

configure: error: could not find a working compiler, see config.log
for details.

Dan

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[sage-devel] Re: OS X 10.7 testers needed

2012-04-04 Thread John H Palmieri


On Tuesday, April 3, 2012 6:11:48 AM UTC-7, Jeroen Demeyer wrote:
>
> Could somebody with an OS X 10.7 machine please try to build the
> following from source, preferably with SAGE_CHECK=yes:
>
>
> http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta12-gcc/sage-5.0.beta12-gcc.tar
>

On one machine, with SAGE_CHECK unset, all tests passed.

On another machine, with SAGE_CHECK=yes, self-tests failed for zn_poly, as 
they do sometime when the system is heavily loaded. After working around 
that, all tests passed.

-- 
John

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[sage-devel] Re: OS X 10.7 testers needed

2012-04-03 Thread Dima Pasechnik
On 2012-04-03, Jeroen Demeyer  wrote:
> Could somebody with an OS X 10.7 machine please try to build the
> following from source, preferably with SAGE_CHECK=yes:
>
> http://boxen.math.washington.edu/home/jdemeyer/release/sage-5.0.beta12-gcc/sage-5.0.beta12-gcc.tar
>

needless to say, sqrt5.cs.washington.edu is down again...

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