date:20200907

Re: [sage-release] Sage 9.2.beta12 released

2020-09-07 Thread Kenji Iohara

I could compile it on Mac OS 10.15.6 but failed in making ptestlong: The following package(s) may have failed to build (not necessarilyduring this run of 'make all-start'):* documentation:         dochtml  last build time: Sep 7 09:57  log file:        /Users/iohara/Desktop/sage-9.2.beta12/logs/pkgs/../dochtml.loghere is its logfile:



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dochtml.log
Description: Binary data
2020/09/07 7:21、Matthias Köppe のメール:On Sunday, September 6, 2020 at 4:25:39 PM UTC-7, Volker Braun wrote:As always, you can get the latest beta version from the "develop" git branch. Alternatively, the self-contained source tarball is at http://www.sagemath.org/download-latest.html 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 9.2.beta12Thanks for preparing the new beta.Testers, please note that this beta contains the Python 3.8 upgrade from https://trac.sagemath.org/ticket/27754, so if previous betas rejected your distribution's python 3.8, it would make sense to do a "make python3-clean" before rebuilding.Tests have started at https://github.com/sagemath/sage/actions . First results:ubuntu-{trusty, xenial, focal}: cleanubunt-{bionic,eoan, groovy}-minimal: cleanubuntu-bionic-standard (https://github.com/sagemath/sage/runs/1078907737):  [dochtml]   UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 2661: ordinal not in range(128)  [dochtml] Full log file: logs/dochtml.logMakefile:1874: recipe for target 'doc-html' failedubuntu-eoan-standard (https://github.com/sagemath/sage/runs/1078907750)sage -t --random-seed=0 src/sage/libs/eclib/interface.py  # 2 doctests failedubuntu-groovy-standard (https://github.com/sagemath/sage/runs/107890): sage -t --random-seed=0 src/doc/en/constructions/algebraic_geometry.rst  # 1 doctest failedsage -t --random-seed=0 src/doc/en/developer/coding_in_other.rst  # 1 doctest failedsage -t --random-seed=0 src/sage/interfaces/singular.py  # Killed due to segmentation faultsage -t --random-seed=0 src/sage/modules/fg_pid/fgp_module.py  # 3 doctests failedsage -t --random-seed=0 src/sage/modules/free_module_morphism.py  # 3 doctests failedsage -t --random-seed=0 src/sage/rings/complex_arb.pyx  # 6 doctests failedsage -t --random-seed=0 src/sage/rings/real_arb.pyx  # 2 doctests failedsage -t --random-seed=0 src/sage/schemes/hyperelliptic_curves/monsky_washnitzer.py  # Killed due to abortTests for optional packages are running at https://github.com/sagemath/sage/actions/runs/242113003As noted in https://trac.sagemath.org/ticket/29900, many optional packages fail to build. I propose that we do a mass downgrade of broken optional packages to experimental status in https://trac.sagemath.org/ticket/30349, based on the test results of this beta.

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Thierry Dumont

Migration from beta 11 to beta 12 (Ubuntu 20-04):

- compilation ok.

- make ptestlong:

sage -t --long --warn-long 110.2 --random-seed=0
src/sage/interfaces/singular.py  # Killed due to segmentation fault

t.d.

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Eric Gourgoulhon

Hi,

Le lundi 7 septembre 2020 à 07:21:19 UTC+2, matthia...@gmail.com a écrit :

>
> ubuntu-bionic-standard (https://github.com/sagemath/sage/runs/1078907737 
> 
> ):
>   [dochtml]   UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in 
> position 2661: ordinal not in range(128)
>   [dochtml] Full log file: logs/dochtml.log
> Makefile:1874: recipe for target 'doc-html' failed
>

For the record, I did not experience such an issue on my Ubuntu Bionic 
(18.04) machine: the incremental build from Sage 9.2.beta11 went well, 
including for doc-html. 

Eric.

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Re: [sage-release] Sage 9.2.beta12 released

2020-09-07 Thread Dima Pasechnik

please also send the top-level config.log
Otherwise it is not clear how to reproduce this, e.g. what  Python is used.

On Mon, Sep 7, 2020 at 10:09 AM Kenji Iohara  wrote:
>
> I could compile it on Mac OS 10.15.6 but failed in making ptestlong:
>
> The following package(s) may have failed to build (not necessarily
> during this run of 'make all-start'):
>
> * documentation: dochtml
>   last build time: Sep 7 09:57
>   log file:
> /Users/iohara/Desktop/sage-9.2.beta12/logs/pkgs/../dochtml.log
>
> here is its logfile:
>
> --
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>
>
> 2020/09/07 7:21、Matthias Köppe のメール:
>
> On Sunday, September 6, 2020 at 4:25:39 PM UTC-7, Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>>
>> 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 
>> 9.2.beta12
>>
>
> Thanks for preparing the new beta.
>
> Testers, please note that this beta contains the Python 3.8 upgrade from 
> https://trac.sagemath.org/ticket/27754, so if previous betas rejected your 
> distribution's python 3.8, it would make sense to do a "make python3-clean" 
> before rebuilding.
>
>
> Tests have started at https://github.com/sagemath/sage/actions . First 
> results:
>
> ubuntu-{trusty, xenial, focal}: clean
>
> ubunt-{bionic,eoan, groovy}-minimal: clean
>
> ubuntu-bionic-standard (https://github.com/sagemath/sage/runs/1078907737):
>   [dochtml]   UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in 
> position 2661: ordinal not in range(128)
>   [dochtml] Full log file: logs/dochtml.log
> Makefile:1874: recipe for target 'doc-html' failed
>
> ubuntu-eoan-standard (https://github.com/sagemath/sage/runs/1078907750)
> sage -t --random-seed=0 src/sage/libs/eclib/interface.py  # 2 doctests failed
>
> ubuntu-groovy-standard (https://github.com/sagemath/sage/runs/107890):
> sage -t --random-seed=0 src/doc/en/constructions/algebraic_geometry.rst  # 1 
> doctest failed
> sage -t --random-seed=0 src/doc/en/developer/coding_in_other.rst  # 1 doctest 
> failed
> sage -t --random-seed=0 src/sage/interfaces/singular.py  # Killed due to 
> segmentation fault
> sage -t --random-seed=0 src/sage/modules/fg_pid/fgp_module.py  # 3 doctests 
> failed
> sage -t --random-seed=0 src/sage/modules/free_module_morphism.py  # 3 
> doctests failed
> sage -t --random-seed=0 src/sage/rings/complex_arb.pyx  # 6 doctests failed
> sage -t --random-seed=0 src/sage/rings/real_arb.pyx  # 2 doctests failed
> sage -t --random-seed=0 
> src/sage/schemes/hyperelliptic_curves/monsky_washnitzer.py  # Killed due to 
> abort
>
>
> Tests for optional packages are running at 
> https://github.com/sagemath/sage/actions/runs/242113003
>
> As noted in https://trac.sagemath.org/ticket/29900, many optional packages 
> fail to build. I propose that we do a mass downgrade of broken optional 
> packages to experimental status in https://trac.sagemath.org/ticket/30349, 
> based on the test results of this beta.
>
>
>
> --
> You received this message because you are subscribed to the Google Groups 
> "sage-release" group.
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>
>
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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Sébastien Labbé

I now upgraded to Ubuntu 20.04.1 LTS (which may explains why I am reporting 
errors below I was not reporting before).

Moreover, my config.log confirms that I am using python3.8 from my system:

...
##  ##
## Checking whether SageMath should install SPKG python3... ##
##  ##
configure:29385: checking whether any of sqlite libpng bzip2 xz libffi is 
installed as or will be installed as SPKG
configure:29394: result: no
configure:29404: checking for python3 >= 3.6, < 3.9 with modules sqlite3, 
ctypes, math, hashlib, crypt, readline, socket, zlib, distutils.core
configure:29410: result: 
configure:29425: checking ... whether /usr/bin/python3.8 is good
configure:29618: result: yes
configure:29620: checking for python3 >= 3.6, < 3.9 with modules sqlite3, 
ctypes, math, hashlib, crypt, readline, socket, zlib, distutils.core
configure:29679: result: /usr/bin/python3.8
configure:29694: will use system package and not install SPKG python3
...

Testing few optional and external packages, I get:

Using 
--optional=4ti2,ccache,cryptominisat,dot2tex,e_antic,external,fricas,glucose,latte_int,libnauty,lidia,lrslib,memlimit,normaliz,notedown,openssl,pandoc_attributes,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin

--
sage -t --long --random-seed=0 
src/doc/en/constructions/interface_issues.rst  # 1 doctest failed
sage -t --long --random-seed=0 src/doc/en/constructions/linear_algebra.rst  
# 1 doctest failed
sage -t --long --random-seed=0 src/doc/en/developer/coding_in_other.rst  # 
1 doctest failed
sage -t --long --random-seed=0 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
sage -t --long --random-seed=0 src/sage/databases/oeis.py  # 1 doctest 
failed
sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py  # 2 
doctests failed
sage -t --long --random-seed=0 src/sage/graphs/graph.py  # 3 doctests failed
sage -t --long --random-seed=0 src/sage/interfaces/octave.py  # 3 doctests 
failed
sage -t --long --random-seed=0 src/sage/symbolic/integration/external.py  # 
1 doctest failed
sage -t --long --random-seed=0 src/sage/symbolic/integration/integral.py  # 
1 doctest failed
Doctests interrupted: 2236/4204 files tested
--
External software detected for doctesting: graphviz,internet,octave


For some reason that I ignore, the doctests were interrupted while I was in 
a
webconf on the same machine. I will rerun the tests and post the result 
later.


Doctests failures are copied below.


sage -t --long --random-seed=0 src/doc/en/constructions/linear_algebra.rst
**
File "src/doc/en/constructions/linear_algebra.rst", line 454, in 
doc.en.constructions.linear_algebra
Failed example:
octave.solve_linear_system(A,b)# optional - octave
Exception raised:
Traceback (most recent call last):
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
 
line 720, in _run
self.compile_and_execute(example, compiler, test.globs)
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
 
line 1145, in compile_and_execute
exec(compiled, globs)
  File "", line 1, in 

octave.solve_linear_system(A,b)# optional - octave
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/interfaces/octave.py",
 
line 519, in solve_linear_system
return eval(sol)
  File "", line 1
[-0.33, 0.67, 0,
   ^
SyntaxError: unexpected EOF while parsing
**
1 item had failures:
   1 of 115 in doc.en.constructions.linear_algebra
0 tests not run because we ran out of time
[93 tests, 1 failure, 3.17 s]



sage -t --long --random-seed=0 src/doc/en/constructions/interface_issues.rst
**
File "src/doc/en/constructions/interface_issues.rst", line 432, in 
doc.en.constructions.interface_issues
Failed example:
octave("atanh(1.1)")   ## optional - octave
Expected:
(1.52226,-1.5708)
Got:
 (1.52226,1.5708)
**
1 item had failures:
   1 of  22 in doc.en.constructions.interface_issues
0 tests not run because we ran out of time
[17 tests, 1 failure, 2.68 s]
sage -t --long --random-seed=0 src/sage/interfaces/octave.py
**
File "src/sage/interfaces/octave.py", line 159, in 
sage.interfaces.octave.Octave
Failed example:
octave.eval("a = [ 1, 1, 2; 3, 5, 8; 13, 21, 33 ]")# optional - 
octave
Expected:
'a =\n\n 1 1 2\n 3 5 8\n 13 21 3

Re: [sage-release] Sage 9.2.beta12 released

2020-09-07 Thread 'jonatha...@googlemail.com' via sage-release

pynormaliz 2.12 isn't on the mirrors yet

(I can work around that)

Dima Pasechnik schrieb am Montag, 7. September 2020 um 13:20:34 UTC+2:

> please also send the top-level config.log
> Otherwise it is not clear how to reproduce this, e.g. what Python is used.
>
> On Mon, Sep 7, 2020 at 10:09 AM Kenji Iohara  wrote:
> >
> > I could compile it on Mac OS 10.15.6 but failed in making ptestlong:
> >
> > The following package(s) may have failed to build (not necessarily
> > during this run of 'make all-start'):
> >
> > * documentation: dochtml
> > last build time: Sep 7 09:57
> > log file: /Users/iohara/Desktop/sage-9.2.beta12/logs/pkgs/../dochtml.log
> >
> > here is its logfile:
> >
> > --
> > You received this message because you are subscribed to the Google 
> Groups "sage-release" group.
> > To unsubscribe from this group and stop receiving emails from it, send 
> an email to sage-release...@googlegroups.com.
> > To view this discussion on the web visit 
> https://groups.google.com/d/msgid/sage-release/558F391C-C79B-46BE-A579-0450178A7797%40gmail.com
> .
> >
> >
> > 2020/09/07 7:21、Matthias Köppe のメール:
> >
> > On Sunday, September 6, 2020 at 4:25:39 PM UTC-7, Volker Braun wrote:
> >>
> >> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
> >>
> >>
> >> 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 
> 9.2.beta12
> >>
> >
> > Thanks for preparing the new beta.
> >
> > Testers, please note that this beta contains the Python 3.8 upgrade from 
> https://trac.sagemath.org/ticket/27754, so if previous betas rejected 
> your distribution's python 3.8, it would make sense to do a "make 
> python3-clean" before rebuilding.
> >
> >
> > Tests have started at https://github.com/sagemath/sage/actions . First 
> results:
> >
> > ubuntu-{trusty, xenial, focal}: clean
> >
> > ubunt-{bionic,eoan, groovy}-minimal: clean
> >
> > ubuntu-bionic-standard (https://github.com/sagemath/sage/runs/1078907737
> ):
> > [dochtml] UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in 
> position 2661: ordinal not in range(128)
> > [dochtml] Full log file: logs/dochtml.log
> > Makefile:1874: recipe for target 'doc-html' failed
> >
> > ubuntu-eoan-standard (https://github.com/sagemath/sage/runs/1078907750)
> > sage -t --random-seed=0 src/sage/libs/eclib/interface.py # 2 doctests 
> failed
> >
> > ubuntu-groovy-standard (https://github.com/sagemath/sage/runs/107890
> ):
> > sage -t --random-seed=0 src/doc/en/constructions/algebraic_geometry.rst 
> # 1 doctest failed
> > sage -t --random-seed=0 src/doc/en/developer/coding_in_other.rst # 1 
> doctest failed
> > sage -t --random-seed=0 src/sage/interfaces/singular.py # Killed due to 
> segmentation fault
> > sage -t --random-seed=0 src/sage/modules/fg_pid/fgp_module.py # 3 
> doctests failed
> > sage -t --random-seed=0 src/sage/modules/free_module_morphism.py # 3 
> doctests failed
> > sage -t --random-seed=0 src/sage/rings/complex_arb.pyx # 6 doctests 
> failed
> > sage -t --random-seed=0 src/sage/rings/real_arb.pyx # 2 doctests failed
> > sage -t --random-seed=0 
> src/sage/schemes/hyperelliptic_curves/monsky_washnitzer.py # Killed due to 
> abort
> >
> >
> > Tests for optional packages are running at 
> https://github.com/sagemath/sage/actions/runs/242113003
> >
> > As noted in https://trac.sagemath.org/ticket/29900, many optional 
> packages fail to build. I propose that we do a mass downgrade of broken 
> optional packages to experimental status in 
> https://trac.sagemath.org/ticket/30349, based on the test results of this 
> beta.
> >
> >
> >
> > --
> > You received this message because you are subscribed to the Google 
> Groups "sage-release" group.
> > To unsubscribe from this group and stop receiving emails from it, send 
> an email to sage-release...@googlegroups.com.
> > To view this discussion on the web visit 
> https://groups.google.com/d/msgid/sage-release/6563fac7-a1e5-4da3-862e-d1cc6631a3d0o%40googlegroups.com
> .
> >
> >
> > --
> > You received this message because you are subscribed to the Google 
> Groups "sage-release" group.
> > To unsubscribe from this group and stop receiving emails from it, send 
> an email to sage-release...@googlegroups.com.
> > To view this discussion on the web visit 
> https://groups.google.com/d/msgid/sage-release/558F391C-C79B-46BE-A579-0450178A7797%40gmail.com
> .
>

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Sébastien Labbé

Again, the doctests gets interrupted with an error OSError: [Errno 24] Too 
many open files. Is it related to Python 3.8?

...
--
sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py  # 2 
doctests failed
sage -t --long --random-seed=0 src/sage/databases/oeis.py  # 1 doctest 
failed
sage -t --long --random-seed=0 src/sage/symbolic/integration/integral.py  # 
1 doctest failed
sage -t --long --random-seed=0 src/sage/graphs/graph.py  # 3 doctests failed
sage -t --long --random-seed=0 src/sage/symbolic/integration/external.py  # 
1 doctest failed
sage -t --long --random-seed=0 src/doc/en/constructions/linear_algebra.rst  
# 1 doctest failed
sage -t --long --random-seed=0 
src/doc/en/constructions/interface_issues.rst  # 1 doctest failed
sage -t --long --random-seed=0 src/sage/interfaces/octave.py  # 3 doctests 
failed
sage -t --long --random-seed=0 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
sage -t --long --random-seed=0 src/doc/en/developer/coding_in_other.rst  # 
1 doctest failed
Doctests interrupted: 1862/4204 files tested
--
Total time for all tests: 2372.2 seconds
cpu time: 12523.8 seconds
cumulative wall time: 13826.7 seconds
Traceback (most recent call last):
  File "/home/slabbe/GitBox/sage/src/bin/sage-runtests", line 182, in 

err = DC.run()
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/control.py",
 
line 1230, in run
self.run_doctests()
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/control.py",
 
line 931, in run_doctests
self.dispatcher.dispatch()
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
 
line 2052, in dispatch
self.parallel_dispatch()
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
 
line 1947, in parallel_dispatch
w.start()  # This might take some time
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
 
line 2219, in start
super(DocTestWorker, self).start()
  File "/usr/lib/python3.8/multiprocessing/process.py", line 121, in start
self._popen = self._Popen(self)
  File "/usr/lib/python3.8/multiprocessing/context.py", line 224, in _Popen
return _default_context.get_context().Process._Popen(process_obj)
  File "/usr/lib/python3.8/multiprocessing/context.py", line 276, in _Popen
return Popen(process_obj)
  File "/usr/lib/python3.8/multiprocessing/popen_fork.py", line 19, in 
__init__
self._launch(process_obj)
  File "/usr/lib/python3.8/multiprocessing/popen_fork.py", line 69, in 
_launch
child_r, parent_w = os.pipe()
OSError: [Errno 24] Too many open files

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Emmanuel Charpentier



On Debian testing running on core i5 + 8 GB RAM, upgrading 9.2.beta11 to 
9.2.beta12 after make python3-cleanusing all system packages and running 
ptestlong gives 7 permanent failures :
File Result P/T 
src/sage/schemes/hyperelliptic_curves/monsky_washnitzer.py Killed due to 
abort P 
src/sage/rings/complex_arb.pyx 6 doctests failed P 
src/sage/modules/fg_pid/fgp_module.py 3 doctests failed P 
src/doc/en/constructions/algebraic_geometry.rst 1 doctest failed P 
src/sage/rings/real_arb.pyx 2 doctests failed P 
src/sage/modules/free_module_morphism.py 3 doctests failed P 
src/doc/en/developer/coding_in_other.rst 1 doctest failed P 

These failures have been reported already for 2.9.beta11 on the same 
machine, except for the failure observed for coding_in_other.rst, which was 
transient in 2.9.beta11 and is now permanent.

Of note :

   - ./configure failed to recognize the system’s Python packages ; 
   notwithstanding this failure,
  - $SAGE_LOCAL/bin/python3.8 is a symlink to /usr/bin/python3.8 
  - sage -standard | grep python reports python3 as
  (not_installed) 
   - gap-packages still no longer installs (complains about 
   multiply-defined symbols). 

HTH,


Le lundi 7 septembre 2020 01:25:39 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> Again, if there is anything that should be merged in this beta cycle then 
> a positively-reviewed patch has to materialize real soon ;-)
>
>
> 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 
> 9.2.beta12
> 5efa8df9cd Trac #30454: some details in doc of number fields
> d1a1a28695 Trac #30443: Simplify setting and getting "edges" of edges, 
> ridges, incidences in `CombinatorialPolyhedron`
> f8c4e4b530 Trac #30409: Optional ideal parameter for normalize_coordinates
> 603aa8806e Trac #28722: update constants for S-unit solver
> 21f7af35b4 Trac #14735: Bug with Python int division in wigner.py
> 7d9921cca9 Trac #30490: Reduce doctesting time for polyhedra
> 11c8e5b6ff Trac #30487: GH Actions: Test also with Xcode 12 beta
> 80c4c5e916 Trac #30479: deprecate random_DAG
> 505f3f4065 Trac #30470: Make spanning_trees an iterator
> 80d9314aef Trac #30455: pep8 cleanup of the file e_one_star
> d6b5a59b02 Trac #30452: "sage -startuptime" should accept file names too
> 9e5a3ba06e Trac #30449: Fix docbuild warning in combinat plus improve 
> formatting
> 875d7180ca Trac #30442: Implement general table art for tableau-like 
> objects
> e8696d8001 Trac #30440: Pyramid for combinatorial polyhedron
> dfa0d227a5 Trac #30410: Command "sage -tox"
> b8421f50e2 Trac #30401: Unions of subsets of a fixed open set X are not 
> known to be subsets of X
> e0b21bfd1d Trac #30395: enhance fricas lists
> 50d0934dff Trac #30382: More voidlinux.txt
> 1185b94e8d Trac #30212: Fix tkz-graph and tkz-berge links: altermundus.com 
> is gone
> 4974b90112 Trac #28982: Use CombinatorialPolyhedron to obtain faces 
> lattice of polyhedra
> dcf19afbfc Trac #27952: upgrade Normaliz to 3.8.8, PyNormaliz to 2.12, add 
> script package libnauty
> a5f5293ca6 Trac #30496: fix conversion of GAP univariate rat functions, 
> which are polynomial with valuation>0
> 596988abf2 Trac #30489: Two fixes for test suite for products of polyhedra
> b9c5e0bdbd Trac #30488: ci-cygwin: Remove sage_brial
> b0465d76c9 Trac #30317: Update pip to 20.2.2, setuptools to 49.6.0
> d96db5467d Trac #27754: Upgrade: Python 3.8.5
> c353bce995 (tag: 9.2.beta11) Updated SageMath version to 9.2.beta11
>
>

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Sébastien Labbé



On Monday, September 7, 2020 at 2:48:29 PM UTC+2 Sébastien Labbé wrote:

> Again, the doctests gets interrupted with an error OSError: [Errno 24] Too 
> many open files. Is it related to Python 3.8?
>

Running tests only with the optional packages (not the external packages), 
I managed to complete the doctests of the whole library. I get:

--
sage -t --long --random-seed=0 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py  # 2 
doctests failed
sage -t --long --random-seed=0 src/sage/graphs/graph.py  # 3 doctests failed
sage -t --long --random-seed=0 src/sage/interfaces/singular.py  # Killed 
due to segmentation fault
--

rerunning failed tests, I get:

--
sage -t --long --random-seed=0 
src/sage/combinat/designs/incidence_structures.py  # 1 doctest failed
sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py  # 2 
doctests failed
sage -t --long --random-seed=0 src/sage/graphs/graph.py  # 3 doctests failed
--

failures copied below:

sage -t --long --random-seed=0 
src/sage/combinat/designs/incidence_structures.py
**
File "src/sage/combinat/designs/incidence_structures.py", line 2027, in 
sage.combinat.designs.incidence_structures.IncidenceStructure.coloring
Failed example:
len(designs.steiner_triple_system(7).coloring())
Expected:
3
Got:
2
**
1 item had failures:
   1 of   6 in 
sage.combinat.designs.incidence_structures.IncidenceStructure.coloring
8 gap_packages tests not run
3 not tested tests not run
0 tests not run because we ran out of time
[337 tests, 1 failure, 1.29 s]

sage -t --long --random-seed=0 src/sage/graphs/graph.py
**
File "src/sage/graphs/graph.py", line 4507, in 
sage.graphs.graph.Graph.has_homomorphism_to
Failed example:
g.has_homomorphism_to(graphs.CycleGraph(4)) is not False
Expected:
False
Got:
True
**
File "src/sage/graphs/graph.py", line 4902, in sage.graphs.graph.Graph.minor
Failed example:
L = g.minor(graphs.CompleteGraph(3))
Expected:
Traceback (most recent call last):
...
ValueError: This graph has no minor isomorphic to H !
Got:

**
File "src/sage/graphs/graph.py", line 6112, in 
sage.graphs.graph.Graph.topological_minor
Failed example:
g.topological_minor(graphs.CycleGraph(3))
Expected:
False
Got:
Subgraph of (Subgraph of (RandomGNP(15,0.300))): Graph on 0 
vertices
**
3 items had failures:
   1 of  10 in sage.graphs.graph.Graph.has_homomorphism_to
   1 of  14 in sage.graphs.graph.Graph.minor
   1 of   7 in sage.graphs.graph.Graph.topological_minor
2 mcqd tests not run
2 not tested tests not run
13 python_igraph tests not run
0 tests not run because we ran out of time
[1238 tests, 3 failures, 20.78 s]

sage -t --long --random-seed=0 src/sage/graphs/generic_graph.py
**
File "src/sage/graphs/generic_graph.py", line 8909, in 
sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow
Failed example:
h = g.nowhere_zero_flow(k=3)
Expected:
Traceback (most recent call last):
...
EmptySetError: the problem has no feasible solution
Got:

**
File "src/sage/graphs/generic_graph.py", line 9530, in 
sage.graphs.generic_graph.GenericGraph.disjoint_routed_paths
Failed example:
p1,p2 = g.disjoint_routed_paths([((0, 0), (4, 4)), ((0, 4), (4, 0))])
Expected:
Traceback (most recent call last):
...
EmptySetError: the disjoint routed paths do not exist
Got:

**
2 items had failures:
   1 of   5 in sage.graphs.generic_graph.GenericGraph.disjoint_routed_paths
   1 of  29 in sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow
17 bliss tests not run
6 not tested tests not run
39 python_igraph tests not run
0 tests not run because we ran out of time
[3519 tests, 2 failures, 32.11 s]


 

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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Matthias Köppe

On Sunday, September 6, 2020 at 10:21:19 PM UTC-7, Matthias Köppe wrote:
>
> On Sunday, September 6, 2020 at 4:25:39 PM UTC-7, Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>
>> 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 
>> 9.2.beta12
>> Tests have started at https://github.com/sagemath/sage/actions . 
>>
>
*debian*-{jessie,stretch,buster} : Clean 

debian-{bullseye,sid}-minimal: Clean

debian-{bullseye,sid}-standard: doctest failures similar to 
ubuntu-groovy-standard

*debian-buster-i386-standard*: Clean

*linuxmint*-17 (https://github.com/sagemath/sage/runs/1078907871): *Lots of 
doctest failures due to setlocale messages. *(A lot of discussion at 
https://trac.sagemath.org/ticket/30053)

linuxmint-{18,19,19.3}: Clean

*fedora*-{26, 32}: Clean

fedora-{27,28,29,30,31,33}-minimal: Clean (but some exceed 6h while in 
doctests)

fedora-{27,29}-standard (https://github.com/sagemath/sage/runs/1078907974): 
sage -t --random-seed=0 src/sage/lfunctions/sympow.py  # 3 doctests failed
sage -t --random-seed=0 
src/sage/schemes/elliptic_curves/ell_rational_field.py  # 2 doctests failed

fedora-28-standard (https://github.com/sagemath/sage/runs/1078907994): 
Test failures in cvxopt
sage -t --random-seed=0 src/sage/lfunctions/sympow.py  # 3 doctests failed
sage -t --random-seed=0 src/sage/rings/polynomial/groebner_fan.py  # 3 
doctests failed
sage -t --random-seed=0 
src/sage/schemes/elliptic_curves/ell_rational_field.py  # 2 doctests failed

fedora-33-standard (https://github.com/sagemath/sage/runs/1078908107):
  [arb-2.16.0.p0]  
 /sage/local/var/tmp/sage/build/arb-2.16.0.p0/src/fmpr.h:25:10: fatal 
error: flint/config.h: No such file or directory
  [arb-2.16.0.p0]  25 | #include "flint/config.h"
  [arb-2.16.0.p0] |  ^~~~
  [arb-2.16.0.p0]   compilation terminated.

*centos*-{7,8}: Clean

*gentoo*: Clean

gentoo-python3.7: Clean

*archlinux*-minimal: Clean

archlinux-standard (https://github.com/sagemath/sage/runs/1078908183): 
sage -t --random-seed=0 src/sage/interfaces/quit.py  # 1 doctest failed

*slackware*-14.2-minimal (https://github.com/sagemath/sage/runs/1078908190
): 
[libs ] WARNING: autodoc: failed to import module 'giac' from module 
'sage.libs'; the following exception was raised:
[libs ] libsasl2.so.3: cannot open shared object file: No such file or 
directory

slackware-14.2-standard: Clean

*conda-forge*-minimal (https://github.com/sagemath/sage/runs/1078908216):
Error building python3, Failures testing package symmetrica

conda-forge-standard (https://github.com/sagemath/sage/runs/1078908224):
sage -t --random-seed=0 src/doc/en/constructions/algebraic_geometry.rst  # 
1 doctest failed
sage -t --random-seed=0 src/doc/en/developer/coding_in_other.rst  # 1 
doctest failed
sage -t --random-seed=0 src/sage/misc/cython.py  # 3 doctests failed
sage -t --random-seed=0 src/sage/modules/fg_pid/fgp_module.py  # 3 doctests 
failed
sage -t --random-seed=0 src/sage/modules/free_module_morphism.py  # 3 
doctests failed
sage -t --random-seed=0 src/sage/rings/complex_arb.pyx  # 6 doctests failed
sage -t --random-seed=0 src/sage/rings/real_arb.pyx  # 2 doctests failed
sage -t --random-seed=0 
src/sage/schemes/hyperelliptic_curves/monsky_washnitzer.py  # Killed due to 
abort

conda-forge-ubuntu-standard (
https://github.com/sagemath/sage/runs/1078909743): 
  [pillow-7.2.0]   In file included from 
/home/runner/work/sage/sage/.tox/local-conda-forge-ubuntu-standard/conda/include/python3.7m/Python.h:11:0,
  [pillow-7.2.0]from src/_imagingmorph.c:14:
  [pillow-7.2.0]   /usr/include/limits.h:26:10: fatal error: 
bits/libc-header-start.h: No such file or directory
  [pillow-7.2.0]#include 
  [pillow-7.2.0] ^~
  [pillow-7.2.0]   compilation terminated.
  [pillow-7.2.0]   error: command 
'/home/runner/work/sage/sage/.tox/local-conda-forge-ubuntu-standard/conda/bin/x86_64-conda-linux-gnu-cc'
 
failed with exit status 1




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[sage-release] Re: Sage 9.2.beta12 released

2020-09-07 Thread Matthias Köppe

On Sunday, September 6, 2020 at 10:21:19 PM UTC-7, Matthias Köppe wrote:
>
> On Sunday, September 6, 2020 at 4:25:39 PM UTC-7, Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>
>> 5ec24db181 (tag: 9.2.beta12, trac/develop) Updated SageMath version to 
>> 9.2.beta12
>>
>>
> Tests have started at https://github.com/sagemath/sage/actions 
>

*Cygwin* results:

cygwin-standard (https://github.com/sagemath/sage/runs/1079702566): 
*  [sagelib-9.2.beta12]   error: command 'g++' failed with exit status 1*
(No g++ error message to be seen; this is 
https://trac.sagemath.org/ticket/30396)

*This needs urgent help by someone who has a Windows development box.*

cygwin-minimal (https://github.com/sagemath/sage/runs/1079395893):
Times out in stage-ii-a, stage-ii-c - needs repartitioning




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Re: [sage-release] Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

Re: [sage-release] Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

Re: [sage-release] Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

[sage-release] Re: Sage 9.2.beta12 released

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