[sage-release] Re: Sage 9.3.beta7 released
On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > The runs on GH Actions show a very strange failure on fedora-34 and archlinux-latest (https://github.com/sagemath/sage/runs/1850248457): + ./bootstrap rm -rf config configure build/make/Makefile-auto.in rm -f src/doc/en/installation/*.txt rm -rf src/doc/en/reference/spkg/*.rst rm -f src/doc/en/reference/repl/*.txt rm -f environment.yml rm -f src/environment.yml rm -f environment-optional.yml rm -f src/environment-optional.yml ./sage: no Sage installation found in $SAGE_ROOT=/sage ./sage: no Sage installation found in $SAGE_ROOT=/sage ./sage: no Sage installation found in $SAGE_ROOT=/sage This can be reproduced locally using "tox -e docker-fedora-34-standard". It turns out that the built-in command "test" of bash is broken: [root@9d0e0458cde5 sage]# test -r VERSION.txt && echo yes [root@9d0e0458cde5 sage]# bash --version GNU bash, version 5.1.0(1)-release (x86_64-redhat-linux-gnu) Compare with /usr/bin/test [root@9d0e0458cde5 sage]# /usr/bin/test -r VERSION.txt && echo yes yes -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/cde3a003-2491-49e2-9e8a-a1c80884086bn%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
I've opened https://trac.sagemath.org/ticket/31372 for this.
On Tuesday, February 9, 2021 at 11:59:51 AM UTC-8 Matthias Köppe wrote:
> [pari_jupyter-1.3.2] gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g
> -fwrapv -O3 -Wall -Wno-unused -O2 -g -O2 -g -fPIC
> -I/home/sage/sage/local/include/python3.9 -c PARIKernel/io.c -o
> build/temp.linux-x86_64-3.9/PARIKernel/io.o
> [pari_jupyter-1.3.2] PARIKernel/io.c: In function 'PyInit_io':
> [pari_jupyter-1.3.2] PARIKernel/io.c:2905:43: error: 'PyTypeObject' {aka
> 'struct _typeobject'} has no member named 'tp_print'
> [pari_jupyter-1.3.2]2905 |
> __pyx_type_10PARIKernel_2io_PARIKernelIO.tp_print = 0;
>
> this comes from the Python 3.9 upgrade.
>
>
> On Tuesday, February 9, 2021 at 11:57:40 AM UTC-8 Matthias Köppe wrote:
>
>> On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com
>> wrote:
>>
>>> This release breaks (again) our automated docker build on gitlab :
>>>
>>> see https://gitlab.com/sagemath/sage/-/pipelines
>>>
>>>
>> From the log:
>>
>> Error building Sage.
>> The following package(s) may have failed to build (not necessarily
>> during this run of 'make pari_jupyter'):
>> * package: pari_jupyter-1.3.2
>> last build time: Feb 8 16:16
>> log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log
>> build directory:
>> /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2
>> It is safe to delete any log files and build directories, but they
>>
>> This is an optional package.
>>
>>
>>
>
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[sage-release] Re: Sage 9.3.beta7 released
[pari_jupyter-1.3.2] gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -Wno-unused -O2 -g -O2 -g -fPIC
-I/home/sage/sage/local/include/python3.9 -c PARIKernel/io.c -o
build/temp.linux-x86_64-3.9/PARIKernel/io.o
[pari_jupyter-1.3.2] PARIKernel/io.c: In function 'PyInit_io':
[pari_jupyter-1.3.2] PARIKernel/io.c:2905:43: error: 'PyTypeObject' {aka
'struct _typeobject'} has no member named 'tp_print'
[pari_jupyter-1.3.2]2905 |
__pyx_type_10PARIKernel_2io_PARIKernelIO.tp_print = 0;
this comes from the Python 3.9 upgrade.
On Tuesday, February 9, 2021 at 11:57:40 AM UTC-8 Matthias Köppe wrote:
> On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com
> wrote:
>
>> This release breaks (again) our automated docker build on gitlab :
>>
>> see https://gitlab.com/sagemath/sage/-/pipelines
>>
>>
> From the log:
>
> Error building Sage.
> The following package(s) may have failed to build (not necessarily
> during this run of 'make pari_jupyter'):
> * package: pari_jupyter-1.3.2
> last build time: Feb 8 16:16
> log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log
> build directory:
> /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2
> It is safe to delete any log files and build directories, but they
>
> This is an optional package.
>
>
>
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[sage-release] Re: Sage 9.3.beta7 released
On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com wrote: > This release breaks (again) our automated docker build on gitlab : > > see https://gitlab.com/sagemath/sage/-/pipelines > > >From the log: Error building Sage. The following package(s) may have failed to build (not necessarily during this run of 'make pari_jupyter'): * package: pari_jupyter-1.3.2 last build time: Feb 8 16:16 log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log build directory: /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2 It is safe to delete any log files and build directories, but they This is an optional package. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/a86fa608-4ef6-4793-9b45-9e8a8d02e4b5n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
This release breaks (again) our automated docker build on gitlab : see https://gitlab.com/sagemath/sage/-/pipelines Le dimanche 7 février 2021 à 23:04:42 UTC+1, Volker Braun a écrit : > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > 6096110e06 Trac #30517: MemoryError in doctesting > combinat/designs/gen_quadrangles_with_spread.pyx > e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 > f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol > d856033dd6 Trac #31144: refresh the file polyhedron/plot.py > eb9bae531a Trac #31143: shorten range(0, *) in combinat folder > 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol > 5a4ad12275 Trac #31138: Document WSL Installation > c8a7960598 Trac #31134: Update setuptools and setuptools_scm > 45e7ada314 Trac #24459: Segfault in matrix_integer_dense > 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic > values > 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog > 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices > bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle > connections > 00cacf3803 Trac #31272: Improve the documentation for tensor() > 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" > mechanism, fix script to work without SAGE_ROOT > 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor > products with non-signed modules > 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product > definition there > 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets > 35ad55518c Trac #31261: Update pplpy to 0.8.6 > d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 > 57211cf752 Trac #31257: quo_rem gives wrong answers for > LaurentPolynomial_mpair > b282cf6d2d Trac #31256: more care for pbori > e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields > 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in > matrices > 09f5b07182 Trac #31239: Add ore_algebra optional package > 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip > system package installs and other steps, add mechanism for a local > interactive shell > 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs > 3925e96e0a Trac #31196: Code Improvements for Mutability module > 01ad25fc3f Trac #31194: Make Class with Mutability compatible with > require_mutable wrapper > 99d4307f61 Trac #31121: Further refactoring of eta products file > 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter > notebook > 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets > 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in > src/bin/sage-location > 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image > 7823deee62 Trac #31263: Broken `sage -b` > f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of > clang conflict with '-march=native' > aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just > python3 > 70291edd23 Trac #14821: Weird error in exponential integral > 583e83e86d Trac #7423: plot3d can't handle log(0) > d7c2285977 Trac #31243: Stronger Categories for Manifold Examples: > Connectedness > 6ef10b86c1 Trac #31240: sage-flatsurf pip package > 513046f42d Trac #31238: Add admcycles as an optional package > a33370064e Trac #31237: Add slabbe as an optional package > 712ca6e170 Trac #31234: multiplication of matrix with zero columns or rows > fails > 8c3804cc20 Trac #31233: Categories for Homset of Manifolds do not meet > e1bd5e3fe5 Trac #31229: more typing annotations in Tamari interval posets > 02d0fc8821 Trac #31226: Generalize face iterator of combinatorial > polyhedron to locally branched lattices > d9745ca3e1 Trac #31224: Add surface-dynamics as a pip package > 8101d78056 Trac #31221: Alllow arbitrary folder as output directory of > docbuild > 96bac10d15 Trac #31220: Remove test for safe directory while doctesting > 7eebf61583 Trac #31219: Fix escape of docstring for derivative method > a704ef5b17 Trac #31215: Documentation of Item Assignment Behavior for > Bundle Connections > c4f0516700 Trac #31212: fix submonoid method when the generating set > include the identity > bf9205aebc Trac #31210: Make it possible to run github workflows manually > 5477ab510c Trac #31208: Use popcnt and tzcnt to speed up bitsets on Intel > and AMD > 7edddbd058 Trac #31207: Implement copy for binary matrix > 3994d91f70 Trac #31200: Small improvements to binary matrix > db29ef0dc9 Trac #31195: yet another cleanup for pbori > 3e3dcb7ce8 Trac #31192: Installation manual: Fix documentation of python > prerequisite (sage-bootstrap-python) > 6b14dc7113 Trac
[sage-release] Re: Sage 9.3.beta7 released
On Ubuntu 18.04, running tests with various optional/external packages, I
get:
Using
--optional=4ti2,cbc,ccache,cryptominisat,database_jones_numfield,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,libnauty,lidia,lrslib,memlimit,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg
--
sage -t --long --warn-long 72.7 --random-seed=0 src/sage/tests/cmdline.py
# 1 doctest failed
sage -t --long --warn-long 72.7 --random-seed=0 src/sage/geometry/cone.py
# 2 doctests failed
--
External software detected for doctesting:
ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc
Rerunning failed tests, I get:
--
sage -t --long --warn-long 72.0 --random-seed=0 src/sage/tests/cmdline.py
# 1 doctest failed
--
External software detected for doctesting: internet,pandoc
Failures are copied below:
sage -t --long --warn-long 72.0 --random-seed=0 src/sage/tests/cmdline.py
**
File "src/sage/tests/cmdline.py", line 606, in
sage.tests.cmdline.test_executable
Failed example:
err # optional - internet
Expected:
''
Got:
'/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/misc/package.py:114:
UserWarning: failed to fetch the version of pkg=\'ore_algebra\' at
https://pypi.org/pypi/ore_algebra/json\n warnings.warn("failed to fetch
the version of pkg={!r} at {}".format(pkg, url))\n'
**
1 item had failures:
1 of 246 in sage.tests.cmdline.test_executable
14 build tests not run
3 gdb tests not run
6 py2 tests not run
6 sagenb tests not run
0 tests not run because we ran out of time
[245 tests, 1 failure, 29.78 s]
sage -t --long --warn-long 72.7 --random-seed=0 src/sage/geometry/cone.py
**
File "src/sage/geometry/cone.py", line 6189, in sage.geometry.cone.?
Failed example:
K = random_cone(min_ambient_dim=5, min_rays=2,
strictly_convex=False)
Exception raised:
Traceback (most recent call last):
File
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
line 714, in _run
self.compile_and_execute(example, compiler, test.globs)
File
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py",
line 1133, in compile_and_execute
exec(compiled, globs)
File "", line 1, in
K = random_cone(min_ambient_dim=Integer(5), min_rays=Integer(2),
File
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py",
line 6617, in random_cone
K = Cone(rays, lattice=L)
File
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py",
line 462, in Cone
return _Cone_from_PPL(cone, lattice, rays)
File
"/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py",
line 500, in _Cone_from_PPL
for g in cone.minimized_generators():
File "ppl/polyhedron.pyx", line 335, in
ppl.polyhedron.Polyhedron.minimized_generators
RuntimeError: Aborted
**
File "src/sage/geometry/cone.py", line 6191, in sage.geometry.cone.?
Failed example:
K.is_strictly_convex()
Expected:
False
Got:
True
**
1 item had failures:
2 of 77 in sage.geometry.cone.?
0 tests not run because we ran out of time
[1257 tests, 2 failures, 1458.43 s]
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[sage-release] Re: Sage 9.3.beta6 released
Sorry for the late reply on the 9.3.beta6 thread, but it may be helpful for comparisons. On Ubuntu 18.04, with few optional and external packages, I get: Using --optional=4ti2,cbc,ccache,cryptominisat,database_jones_numfield,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,libnauty,lidia,lrslib,memlimit,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg -- All tests passed! -- External software detected for doctesting: ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc Congratulations! -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/98d41cb9-4598-4bf8-b096-82140563fd47n%40googlegroups.com.
