Re: [sage-release] Re: Sage 10.4.beta5 released

[david....@gmail.com]

on macOS, I'm also running Python 3.12 and it's working well (see below).

How can I extract data to see where the tests time out ?

Thanks,
David.

MAC-04017247:sage dcoudert$ ./sage -t src/sage/graphs/generators/

Running doctests with ID 2024-05-03-11-03-11-89a06eef.

Git branch: develop

Git ref: 10.4.beta3-802-g744939e037

Running with SAGE_LOCAL='/Users/dcoudert/sage/local' and 
SAGE_VENV='/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12'

Using 
--optional=benzene,bliss,buckygen,csdp,dot2tex,gap_packages,glucose,homebrew,igraph,libsemigroups,mcqd,pip,plantri,python_igraph,sage,sage_spkg,tdlib,texttable

Features to be detected: 
4ti2,SAGE_SRC,benzene,bliss,buckygen,conway_polynomials,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dvipng,ecm,fpylll,fricas,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,ipython,jmol,jupymake,kenzo,latte_int,lrcalc_python,lrslib,matroid_database,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pynormaliz,pyparsing,python_igraph,requests,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sphinx,symengine_py,sympy,tdlib,threejs

Doctesting 12 files.

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/degree_sequence.py

[17 tests, 3.72 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/distance_regular.pyx

[181 tests, 14.73 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/smallgraphs.py

[510 tests, 12.77 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/families.py

[449 tests, 9.25 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/all.py

[0 tests, 0.00 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/random.py

[217 tests, 7.83 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/chessboard.py

[42 tests, 0.30 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/basic.py

[171 tests, 4.28 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/platonic_solids.py

[34 tests, 3.40 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/intersection.py

[72 tests, 1.27 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/classical_geometries.py

[144 tests, 3.83 s]

sage -t --warn-long 22.9 
--random-seed=239687165614427705433447704824745784831 
src/sage/graphs/generators/world_map.py

[20 tests, 0.08 s]

--

All tests passed!

--

Total time for all tests: 79.3 seconds

cpu time: 24.5 seconds

cumulative wall time: 61.5 seconds

Features detected for doctesting: 
gap_package_atlasrep,gap_package_design,gap_package_grape,networkx,numpy,sage.combinat,sage.geometry.polyhedron,sage.groups,sage.libs.flint,sage.libs.gap,sage.libs.pari,sage.modules,sage.numerical.mip,sage.plot,sage.rings.finite_rings,sage.rings.number_field,sage.schemes,sage.symbolic,scipy

pytest is not installed in the venv, skip checking tests that rely on it


On Friday, May 3, 2024 at 3:25:41 PM UTC+2 Dima Pasechnik wrote:

> On Fri, May 03, 2024 at 05:47:27AM -0700, david....@gmail.com wrote:
> > Thank you for this new release.
> > 
> > With Fedora 39, I have the following issue that I don't observe on macOS 
> > 
> > maserati:/some/path/sage> ./sage -t 
> > src/sage/graphs/generators/smallgraphs.py
> > 
> > too few successful tests, not using stored timings
> > 
> > Running doctests with ID 2024-05-03-12-10-24-1

[sage-release] Re: Sage 10.4.beta5 released

[david....@gmail.com]

Thank you for this new release.

With Fedora 39, I have the following issue that I don't observe on macOS 

maserati:/some/path/sage> ./sage -t 
src/sage/graphs/generators/smallgraphs.py

too few successful tests, not using stored timings

Running doctests with ID 2024-05-03-12-10-24-1c65d6ef.

Git branch: develop

Git ref: 10.4.beta5

Running with SAGE_LOCAL='/home/dcoudert/sage/local' and 
SAGE_VENV='/home/dcoudert/sage/local/var/lib/sage/venv-python3.12'

Using 
--optional=benzene,bliss,buckygen,csdp,dot2tex,fedora,gap_packages,glucose,igraph,libsemigroups,mcqd,pip,plantri,python_igraph,sage,sage_spkg,tdlib,texttable

Features to be detected: 
4ti2,SAGE_SRC,benzene,bliss,buckygen,conway_polynomials,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dvipng,ecm,fpylll,fricas,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,ipython,jmol,jupymake,kenzo,latte_int,lrcalc_python,lrslib,matroid_database,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pynormaliz,pyparsing,python_igraph,requests,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sphinx,symengine_py,sympy,tdlib,threejs

Doctesting 1 file.

sage -t --random-seed=97244284769564606085961768045450911646 
src/sage/graphs/generators/smallgraphs.py

Timed out (and interrupt failed)

**


--

sage -t --random-seed=97244284769564606085961768045450911646 
src/sage/graphs/generators/smallgraphs.py  # Timed out (and interrupt 
failed)

--

Total time for all tests: 660.1 seconds

cpu time: 0.0 seconds

cumulative wall time: 0.0 seconds

Features detected for doctesting: 
networkx,sage.geometry.polyhedron,sage.groups,sage.libs.pari,sage.modules,sage.numerical.mip,sage.plot,sage.rings.finite_rings,sage.rings.number_field,sage.symbolic

pytest is not installed in the venv, skip checking tests that rely on it


Same issue with

sage -t --random-seed=76417292471192601569274824800602906818 
src/sage/graphs/strongly_regular_db.pyx  # Timed out (and interrupt failed)

sage -t --random-seed=76417292471192601569274824800602906818 
src/sage/graphs/generators/classical_geometries.py  # Timed out (and 
interrupt failed)

sage -t --random-seed=76417292471192601569274824800602906818 
src/sage/graphs/generators/distance_regular.pyx  # Timed out (and interrupt 
failed)

sage -t --random-seed=76417292471192601569274824800602906818 
src/sage/graphs/generators/smallgraphs.py  # Timed out (and interrupt 
failed)


I don't know what's going on.

David.

On Friday, May 3, 2024 at 1:08:14 AM UTC+2 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> 744939e037a (github/develop, tag: 10.4.beta5) Updated SageMath version to 
> 10.4.beta5
> e77b3df44ad gh-37915: Replace doctests from jacobian_khuri_makdisi.py 
> taking too long time
> 422c59e95ce gh-37911: Fix overflow in hypergeometric trace
> 67f26757bcb gh-37904: Change `SetSystem` representation
> a1354a74b91 gh-37883: gap: don't use deprecated LaTeX() and LaTeXObj()
> 53566be0ca2 gh-37882: eclib: fix doctests after 20240408 update
> 31cf6d3b0fa gh-37872: sage.{topology,homology}: Remove deprecated chomp 
> interface
> 75c86c8f28c gh-37870: `sage.ext`: Remove deprecated code
> c46302c3a6d gh-37868: `sage.misc.misc`: Remove deprecated code
> b14d3ec8dc3 gh-37856: `sage.misc.dist`: Remove; deprecated in #30207 (2022)
> 6753fbdecdc gh-37855: `sage.misc.package`: Remove deprecated code
> 9ce51d09089 gh-37853: Work around inconsistent iteration in 
> `multi_polynomial_sequence.py`
> 969b687c5f6 gh-37851: Fix issue 37587 regarding the Link class plot method
> 620babd49fb gh-37841: `.ci/write-dockerfile.sh`: Move here from build/bin/
> af6c2085804 gh-37836: fricas/do not get inputform twice
> ac9c1b07203 gh-37835: Optimize `DisjointSet`
> 6e58d87dcc1 gh-37833: 

[sage-release] Re: Sage 10.2.beta9 released

[david....@gmail.com]

I'm seeing a new random failure on both MacOS and Fedora 35. The test 
passes with other random seeds.

sage -t --warn-long 33.1 
--random-seed=119293255820329071348175335411518596036 
src/sage/tests/book_stein_ent.py

**

File "src/sage/tests/book_stein_ent.py", line 206, in 
sage.tests.book_stein_ent

Failed example:

decrypt(c, d, n)

Expected:

123

Got:

49

**

1 item had failures:

   1 of 257 in sage.tests.book_stein_ent

[256 tests, 1 failure, 5.62 s]


sage -t --long --warn-long 33.1 
--random-seed=316346340216019203823556085838607651488 
src/sage/tests/book_stein_ent.py

[261 tests, 5.91 s]

--

All tests passed!

--

Total time for all tests: 6.0 seconds

cpu time: 5.9 seconds

cumulative wall time: 5.9 seconds

sage -t --long --warn-long 33.1 
--random-seed=291401821193365627335310477024028027230 
src/sage/tests/book_stein_ent.py

[261 tests, 6.82 s]

--

All tests passed!

--

Total time for all tests: 6.9 seconds

cpu time: 7.4 seconds

cumulative wall time: 6.8 seconds

On Wednesday, November 1, 2023 at 1:04:00 AM UTC+1 John H Palmieri wrote:

> I'm seeing one new failure on two different OS X machines (one Intel, one 
> M2):
>
> File 
> "src/sage/tests/books/computational-mathematics-with-sagemath/mpoly_doctest.py",
>  
> line 398, in 
> sage.tests.books.computational-mathematics-with-sagemath.mpoly_doctest
> Failed example:
> [CDF['x'](p(y=ys[0][0])).roots() for p in J.gens()] # abs tol 2e-15
> Expected:
> [[(-0.5999, 1), (0.6001, 1)], 
> [(0.6001, 1), (2.601, 1)]]
> Got:
> [[(-0.5998, 1), (0.5999, 1)],
>  [(0.6001 - 6.162975822039155e-33*I, 1),
>   (2.6 + 3.0814879110195774e-32*I, 1)]]
> **
> 1 item had failures:
>1 of 161 in 
> sage.tests.books.computational-mathematics-with-sagemath.mpoly_doctest
> [160 tests, 1 failure, 9.54 s]
> --
> sage -t --random-seed=151162198507806711540314627633568329221 
> src/sage/tests/books/computational-mathematics-with-sagemath/mpoly_doctest.py 
>  # 1 doctest failed
>
>
> On Monday, October 30, 2023 at 5:22:19 PM UTC-7 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>> I'm proposing 10.2.rc0 next, so if there is anything that you want to be 
>> merged before then now would be a good time to do so ;)
>>
>>
>> eb8417b6107 (github/develop, tag: 10.2.beta9) Updated SageMath version to 
>> 10.2.beta9
>> c0221f90a86 gh-36554: Speedup of the method to reduce ternary quadratic 
>> forms in the class TernaryQF
>> f5bdda94fd4 gh-36553: Add a hash function for the class TernaryQF.
>> 37f7f5d5028 gh-36552: `src/sage/misc/cython.py`: Fix the workaround for 
>> setuptools_scm
>> ccb093422cd gh-36550: remove deprecated name parameter in category ; 
>> capital for Coxeter
>> 5c6004be074 gh-36547: expurge parent_old from cryptosystem
>> 7c6cda9559f gh-36541: `build/pkgs/nauty`: Upgrade to 2.8.6, require nauty 
>> >= 2.8
>> c8299c7b1b6 gh-36540: `build/pkgs/pip`: Increase lower version bound; 
>> upgrade `pip`, `wheel`, `packaging`, `platformdirs`
>> 970d7f27c88 gh-36537: refresh the maple(tm) interface
>> ee0adcdad3d gh-36535: build/pkgs/openssl: Update to 3.0.12
>> 81665ba4a36 gh-36532: `pkgs/sagemath-standard`: Fix sdist
>> fef74127ec2 gh-36528: some cleanup in quadratic forms
>> d2523e70b00 gh-36522: Fix linter failure E401 multiple imports on one line
>> 7c974480400 gh-36521: GH Actions: Fix wheel build
>> ac7ed0e2478 gh-36520: `pkgs/sagemath-{bliss,sirocco,tdlib}`: Fix sdists
>> dff2b2db763 gh-36516: `sage.schemes.toric`: Remove pyright 'is possibly 
>> unbound' warnings
>> f79dc7a181f gh-36514: `build/pkgs/sagenb_export`: Fix install-requires.txt
>> 5eb0dba9618 gh-36513: `networkx`, `scipy`, `ipywidgets`: Update version 
>> ranges in `conda.txt`
>> 15b24deb5d7 gh-36511: Exclude symlinks from vscode search config via glob 
>> pattern
>> 0a0f14180e1 gh-36510: Add pyright ci annotations
>> 97b06bd9b4c gh-36509: meson 1.2.3, numpy 1.26.1, require meson >= 1.2.0
>> 1185345f0f4 gh-36507: Fix implicit noexcept warnings
>> 5b0af6777f8 gh-36506: Support launching notebook 7
>> b0569410e72 gh-36499: Remove conda patchelf distro
>> a49c36b8d50 gh-36497: lint.yml: Always run all 3 linters
>> ca7de640ef3 gh-36496: build*.yml: Fix 

[sage-release] Re: Sage 10.2.beta0 released

[david....@gmail.com]

See #36006  for the doctest 
error in `src/sage/rings/integer.pyx`.

See #36149  for the doctest 
error in `src/sage/algebras/quantum_groups/quantum_group_gap.py`.

Best,
David.


On Monday, August 28, 2023 at 6:41:08 PM UTC+2 emanuel.c...@gmail.com wrote:

> On Debian testing running on core i7 + 16 GB RAM, upgarong 10.1.rc0 to 
> 10.2.beta0 gives three new persistent failures :
> charpent@zen-book-flip:/usr/local/sage-10$ sage -t --long --warn-long 
> 216.1 --random-seed=336915508420415526544989948662812522502 
> src/sage/rings/integer.pyx # 1 doctest failed Running doctests with ID 
> 2023-08-28-17-07-06-89fc36a4. Git branch: develop Git ref: 
> 10.1.beta0-2662-g6695becb76 Running with 
> SAGE_LOCAL='/usr/local/sage-10/local' and 
> SAGE_VENV='/usr/local/sage-10/local/var/lib/sage/venv-python3.11' Using 
> --optional=debian,dot2tex,fricas,gap_jupyter,gap_packages,libsemigroups,msolve,pip,pysingular,saclib,sage,sage_spkg,singular_jupyter
>  
> Features to be detected: 
> 4ti2,benzene,bliss,buckygen,conway_polynomials,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_jones_numfield,database_knotinfo,dvipng,fpylll,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,ipython,jupymake,kenzo,latte_int,lrcalc_python,lrslib,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pynormaliz,pyparsing,python_igraph,requests,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sphinx,sympy,tdlib
>  
> Doctesting 1 file. sage -t --long --warn-long 216.1 
> --random-seed=336915508420415526544989948662812522502 
> src/sage/rings/integer.pyx 
> ** File 
> "src/sage/rings/integer.pyx", line 2152, in 
> sage.rings.integer.Integer.__pow__ Warning: Variable 'f' referenced here 
> was set only in doctest marked '# needs sage.symbolic' f(x=3) 
> ** File 
> "src/sage/rings/integer.pyx", line 2157, in 
> sage.rings.integer.Integer.__pow__ Warning: Consider using a block-scoped 
> tag by inserting the line 'sage: # needs sage.symbolic' just before this 
> line to avoid repeating the tag 4 times x, y, z = var('x,y,z') # optional - 
> sage.symbolic 
> ** File 
> "src/sage/rings/integer.pyx", line 3699, in 
> sage.rings.integer.Integer.trial_division Warning: Consider using a 
> block-scoped tag by inserting the line 'sage: # needs sage.libs.pari' just 
> before this line to avoid repeating the tag 6 times n = 
> next_prime(10^6)*next_prime(10^7); n.trial_division() # optional - 
> sage.libs.pari 
> ** File 
> "src/sage/rings/integer.pyx", line 3718, in 
> sage.rings.integer.Integer.trial_division Warning: Consider using a 
> block-scoped tag by inserting the line 'sage: # needs sage.libs.pari' just 
> before this line to avoid repeating the tag 10 times n = next_prime(10^5) * 
> next_prime(10^40); n.trial_division() # optional - sage.libs.pari 
> ** File 
> "src/sage/rings/integer.pyx", line 3907, in sage.rings.integer.Integer.? 
> Warning: Consider using a block-scoped tag by inserting the line 'sage: # 
> needs sage.libs.pari' just before this line to avoid repeating the tag 4 
> times p = next_prime(10^20) # optional - sage.libs.pari 
> ** File 
> "src/sage/rings/integer.pyx", line 3918, in sage.rings.integer.Integer.? 
> Warning: Consider using a block-scoped tag by inserting the line 'sage: # 
> needs sage.libs.pari' just before this line to avoid repeating the tag 4 
> times p = next_prime(10^15) # optional - sage.libs.pari 
> ** File 
> "src/sage/rings/integer.pyx", line 4617, in 
> sage.rings.integer.Integer.gamma Warning: Consider using a block-scoped tag 
> by inserting the line 'sage: # needs sage.symbolic' just before this line 
> to avoid repeating the tag 4 times gamma(5) # 

[sage-release] Re: Sage 10.1 released

[david....@gmail.com]

Thank you Volker for this new release.

when running `./sage -t --long src/sage/` on macOS 12.6.7, I have the 
following errors:
```
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/algebras/quantum_groups/quantum_group_gap.py  # 1 doctest failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/libs/singular/function.pyx  # 2 doctests failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/modular/modform_hecketriangle/readme.py  # 1 doctest failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/modular/modform_hecketriangle/abstract_space.py  # 3 doctests 
failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/modular/modform_hecketriangle/space.py  # 2 doctests failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/rings/polynomial/multi_polynomial_ideal.py  # 3 doctests failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/geometry/polyhedron/base_ZZ.py  # 4 doctests failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/structure/coerce_actions.pyx  # 3 doctests failed
sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/interfaces/singular.py  # 3 doctests failed
--
Total time for all tests: 7886.5 seconds
cpu time: 4630.6 seconds
cumulative wall time: 7517.3 seconds
Features detected for doctesting: 
conway_polynomials,cvxopt,dvipng,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,mpmath,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,polytopes_db,pplpy,primecountpy,pyparsing,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.schemes,sage.symbolic,scipy,singular,sphinx,sympy
pytest is not installed in the venv, skip checking tests that rely on it
```

In details:

sage -t --long --warn-long 20.7 
--random-seed=232716931978977854960449132215536375232 
src/sage/algebras/quantum_groups/quantum_group_gap.py
**
File "src/sage/algebras/quantum_groups/quantum_group_gap.py", line 1581, in 
sage.algebras.quantum_groups.quantum_group_gap.QuantumGroupModule._latex_
Failed example:
latex(S)
Expected:
\begin{tikzpicture}
...
\end{tikzpicture}
Got:
\begin{tikzpicture}[>=latex,line join=bevel,]
%%
\node (node_0) at (144.52bp,292.63bp) [draw,draw=none] {$\langle 1 {(1 
v_0 \otimes 1 v_0)} \rangle$};
  \node (node_1) at (144.52bp,221.71bp) [draw,draw=none] {$\langle 1 
{(1 v_0 \otimes F[a1] v_0)} + q^{-1} {(F[a1] v_0 \otimes 1 v_0)} \rangle$};
  \node (node_2) at (52.519bp,150.47bp) [draw,draw=none] {$\langle 1 
{(F[a1] v_0 \otimes F[a1] v_0)} \rangle$};
  \node (node_3) at (236.52bp,150.47bp) [draw,draw=none] {$\langle 1 
{(1 v_0 \otimes F[a1+a2] v_0)} + q^{-1} {(F[a1+a2] v_0 \otimes 1 v_0)} 
\rangle$};
  \node (node_4) at (144.52bp,79.224bp) [draw,draw=none] {$\langle 1 
{(F[a1] v_0 \otimes F[a1+a2] v_0)} + q^{-1} {(F[a1+a2] v_0 \otimes F[a1] 
v_0)} \rangle$};
  \node (node_5) at (144.52bp,8.3018bp) [draw,draw=none] {$\langle 1 
{(F[a1+a2] v_0 \otimes F[a1+a2] v_0)} \rangle$};
  \draw [blue,->] (node_0) ..controls (144.52bp,274.4bp) and 
(144.52bp,255.54bp)  .. (node_1);
  \definecolor{strokecol}{rgb}{0.0,0.0,0.0};
  \pgfsetstrokecolor{strokecol}
  \draw (153.02bp,257.33bp) node {$1$};
  \draw [blue,->] (node_1) ..controls (119.45bp,201.84bp) and 
(89.94bp,179.63bp)  .. (node_2);
  \draw (118.02bp,186.09bp) node {$1$};
  \draw [red,->] (node_1) ..controls (169.43bp,201.96bp) and 
(198.49bp,180.09bp)  .. (node_3);
  \draw (209.02bp,186.09bp) node {$2$};
  \draw [red,->] (node_2) ..controls (77.09bp,130.97bp) and 
(106.75bp,108.65bp)  .. (node_4);
  \draw (118.02bp,114.85bp) node {$2$};
  \draw [blue,->] (node_3) ..controls (211.6bp,130.71bp) and 
(182.55bp,108.85bp)  .. (node_4);
  \draw (209.02bp,114.85bp) node {$1$};
  \draw [red,->] (node_4) ..controls (144.52bp,60.535bp) and 
(144.52bp,41.477bp)  .. (node_5);
  \draw (153.02bp,43.604bp) node {$2$};
%
\end{tikzpicture}
**
1 

[sage-release] Re: Sage 10.1.beta9 released

[david....@gmail.com]

This release introduces a new failing doctest in `sage/graphs/bliss.pyx` 
and so the test bot is failing on GitHub.
It is due to some changes in `sage/groups/perm_gps/permgroup.py` (don't 
know which PR). In particular, method .gens() now returns a tuple and no 
longer a list.

This is fixed in https://github.com/sagemath/sage/pull/36040.

Best,
David.


On Sunday, August 6, 2023 at 2:09:39 AM UTC+2 Kwankyu Lee wrote:

> Thanks a lot!

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[sage-release] Re: Sage 9.7.beta4 released

[david....@gmail.com]

on MacOS 12.3.1 with Xcode 13.4.1 and a recent brew upgrade, I did: 
bootstrap, source .homebrew-build-env, configure and make.
The compilation went well, but sage is not working at all.
- Sage looks for /usr/local/Cellar/flint/2.9.0/lib/libflint-16.dylib. but I 
have /usr/local/Cellar/flint/2.9.0/lib/libflint-17.dylib
- Also, the completion is not working anymore in the console.

What can I try to fix the issue ?

Thanks,
David.

==
sapristi:sage dcoudert$ ./sage
┌┐
│ SageMath version 9.7.beta4, Release Date: 2022-07-07   │
│ Using Python 3.9.13. Type "help()" for help.   │
└┘
┏┓
┃ Warning: this is a prerelease version, and it may be unstable. ┃
┃ Warning: sage.all is not available; this is a limited REPL.┃
┗┛
sage: import sage.all
---
ImportError   Traceback (most recent call last)
 in 
> 1 import sage.all

~/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/all.py
 
in 
136 from sage.modules.allimport *
137 from sage.monoids.allimport *
--> 138 from sage.algebras.all   import *
139 from sage.modular.allimport *
140 from sage.sat.allimport *

~/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/algebras/all.py
 
in 
 19 from sage.misc.lazy_import import lazy_import
 20 
---> 21 import sage.algebras.catalog as algebras
 22 
 23 from .quantum_groups.all import *

~/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/algebras/catalog.py
 
in 
 78 
 79 from sage.algebras.free_algebra import FreeAlgebra as Free
---> 80 from sage.algebras.quatalg.quaternion_algebra import 
QuaternionAlgebra as Quaternion
 81 from sage.algebras.steenrod.steenrod_algebra import SteenrodAlgebra 
as Steenrod
 82 from 
sage.algebras.finite_dimensional_algebras.finite_dimensional_algebra import 
FiniteDimensionalAlgebra as FiniteDimensional

~/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/algebras/quatalg/quaternion_algebra.py
 
in 
 66 QuaternionAlgebraElement_rational_field,
 67 QuaternionAlgebraElement_number_field)
---> 68 from . import quaternion_algebra_cython
 69 
 70 from sage.modular.modsym.p1list import P1List

~/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/algebras/quatalg/quaternion_algebra_cython.pyx
 
in init sage.algebras.quatalg.quaternion_algebra_cython 
(build/cythonized/sage/algebras/quatalg/quaternion_algebra_cython.cpp:6388)()
> 1 # distutils: language = c++
  2 # distutils: libraries = gmp m NTL_LIBRARIES
  3 # distutils: extra_compile_args = NTL_CFLAGS
  4 # distutils: include_dirs = NTL_INCDIR
  5 # distutils: library_dirs = NTL_LIBDIR

ImportError: 
dlopen(/Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/matrix/matrix_integer_dense.cpython-39-darwin.so,
 
0x0002): Library not loaded: /usr/local/opt/flint/lib/libflint-16.dylib
  Referenced from: /Users/dcoudert/sage/local/lib/liblinbox.0.dylib
  Reason: tried: '/usr/local/opt/flint/lib/libflint-16.dylib' (no such 
file), '/usr/local/lib/libflint-16.dylib' (no such file), 
'/usr/lib/libflint-16.dylib' (no such file), 
'/usr/local/Cellar/flint/2.9.0/lib/libflint-16.dylib' (no such file), 
'/usr/local/lib/libflint-16.dylib' (no such file), 
'/usr/lib/libflint-16.dylib' (no such file)
sage:   

 
==





On Friday, July 8, 2022 at 11:22:21 PM UTC+2 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> 843eb03e7e (tag: 9.7.beta4, trac/develop) Updated SageMath version to 
> 9.7.beta4
> 232d0434cf Trac #33866: Make jupyter_packaging standard; add hatchling, 
> editables, pathspec, poetry_core, tomlkit, deprecation; update tomli, 
> flit_core, setuptools, pip, wheel
> 9307820a88 Trac #33821: Remove use of SAGE_LIB in sage.misc
> b23b788586 Trac #33409: Size of docker images has increased in 9.5
> b5d2fcaeb0 Trac #33029: Feature and doctest tag for runtime cython
> be2bda4921 Trac #29779: pkgconf: Update to 1.8.0, remove runtime dep on 
> environment variable SAGE_LOCAL
> c02edcb15b Trac #25374: Upgrade cryptominisat to 5.8.0, fix build on Cygwin
> e22b33a0c1 Trac #34017: Fix tox-docker builds after #29941
> c4236d0844 Trac 

Re: [sage-release] Sage 9.2.beta12 released

[david....@gmail.com]

with  https://trac.sagemath.org/ticket/30536 
<https://trac.sagemath.org/ticket/30536#comment:2>, I can compile and start 
sage, and all tests pass `make -j1 testlong`.

Le mercredi 9 septembre 2020 à 17:41:42 UTC+2, matthia...@gmail.com a 
écrit :

> On Wednesday, September 9, 2020 at 8:35:10 AM UTC-7, David Coudert wrote:
>>
>> The traces of fortran 9 (and actually gcc 9) are due 
>> to .homebrew-build-env. which contains: 
>>
>> for l in "gcc@9/lib/gcc/9"; do
>> if [ -d "$HOMEBREW/opt/$l" ]; then
>> LIBRARY_PATH="$HOMEBREW/opt/$l:$LIBRARY_PATH"
>> fi
>> done
>>
>
> For that, see https://trac.sagemath.org/ticket/30536 
> <https://trac.sagemath.org/ticket/30536#comment:2>
>
>
>  
>
>>
>>
>> Le 9 sept. 2020 à 17:01, Dima Pasechnik  a écrit :
>>
>> ok, you have a non-standard arb in your Homebrew install.
>>
>> you need to reinstall it, or perhaps better just remove it.
>>
>> you also have traces of gfortran 9 in LIBRARY_PATH - investigate and 
>> clean...
>>
>> On Wed, 9 Sep 2020, 15:57 david@gmail.com,  
>> wrote:
>>
>> I can try to install ntl and flint, but then I have to remove 
>>> dependencies as well, right ?
>>>
>>> sapristi:sage dcoudert$ brew uninstall ntl flint
>>> Error: Refusing to uninstall /usr/local/Cellar/flint/2.6.3
>>> because it is required by arb, which is currently installed.
>>> You can override this and force removal with:
>>>   brew uninstall --ignore-dependencies ntl flint
>>>
>>>
>>> Le mercredi 9 septembre 2020 à 16:53:47 UTC+2, matthia...@gmail.com a 
>>> écrit :
>>>
>>>> On Wednesday, September 9, 2020 at 2:49:19 AM UTC-7, 
>>>> david@gmail.com wrote:
>>>>>
>>>>> If I understand well, I’m facing the case (not completely sure): 
>>>>> homebrew-macos-python3_xcode-gcc_spkg-{minimal,standard}: Various 
>>>>> build errors (ignore for Sage 9.2)
>>>>>
>>>>> That is: macOS 10.15.6 with clang version 11.0.3 (clang-1103.0.32.62) 
>>>>> and all recommended packages installed with homebrew, and unable to 
>>>>> compile 
>>>>> beta12.
>>>>>
>>>>>
>>>> Actually your configuration is "homebrew-macos-standard" with probably 
>>>> some extra homebrew packages installed. 
>>>>
>>>> (The configuration factor "gcc_spkg" refers to using gcc 9.2 from our 
>>>> SPKG instead of Xcode "gcc" (clang).)
>>>>
>>>> My guess is that if you uninstall homebrew's ntl and flint packages and 
>>>> build from scratch (distclean), the build would go through.
>>>>
>>>> https://trac.sagemath.org/ticket/27764 and tickets referenced within 
>>>> address the NTL / thread-local storage issues.
>>>>
>>>>
>>>>
>>>>
>>> -- 
>>> You received this message because you are subscribed to the Google 
>>> Groups "sage-release" group.
>>>
>> To unsubscribe from this group and stop receiving emails from it, send an 
>>> email to sage-r...@googlegroups.com.
>>
>>
>>> To view this discussion on the web visit 
>>> https://groups.google.com/d/msgid/sage-release/6dd4e7b4-164c-4b99-b91e-e759c4a8f14fn%40googlegroups.com
>>>  
>>> <https://groups.google.com/d/msgid/sage-release/6dd4e7b4-164c-4b99-b91e-e759c4a8f14fn%40googlegroups.com?utm_medium=email_source=footer>
>>> .
>>>
>>
>> -- 
>> You received this message because you are subscribed to the Google Groups 
>> "sage-release" group.
>>
>> To unsubscribe from this group and stop receiving emails from it, send an 
>> email to sage-r...@googlegroups.com.
>>
>>
>> To view this discussion on the web visit 
>> https://groups.google.com/d/msgid/sage-release/CAAWYfq0b0Wr6%3DJYbsZD61V%2BBBbWeUPXwMsczFGOp0FN%2Boi7vLg%40mail.gmail.com
>>  
>> <https://groups.google.com/d/msgid/sage-release/CAAWYfq0b0Wr6%3DJYbsZD61V%2BBBbWeUPXwMsczFGOp0FN%2Boi7vLg%40mail.gmail.com?utm_medium=email_source=footer>
>> .
>>
>>

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Re: [sage-release] Sage 9.2.beta12 released

[david....@gmail.com]

I can try to install ntl and flint, but then I have to remove dependencies 
as well, right ?

sapristi:sage dcoudert$ brew uninstall ntl flint
Error: Refusing to uninstall /usr/local/Cellar/flint/2.6.3
because it is required by arb, which is currently installed.
You can override this and force removal with:
  brew uninstall --ignore-dependencies ntl flint


Le mercredi 9 septembre 2020 à 16:53:47 UTC+2, matthia...@gmail.com a 
écrit :

> On Wednesday, September 9, 2020 at 2:49:19 AM UTC-7, david....@gmail.com 
> wrote:
>>
>> If I understand well, I’m facing the case (not completely sure): 
>> homebrew-macos-python3_xcode-gcc_spkg-{minimal,standard}: Various build 
>> errors (ignore for Sage 9.2)
>>
>> That is: macOS 10.15.6 with clang version 11.0.3 (clang-1103.0.32.62) and 
>> all recommended packages installed with homebrew, and unable to compile 
>> beta12.
>>
>>
> Actually your configuration is "homebrew-macos-standard" with probably 
> some extra homebrew packages installed. 
>
> (The configuration factor "gcc_spkg" refers to using gcc 9.2 from our SPKG 
> instead of Xcode "gcc" (clang).)
>
> My guess is that if you uninstall homebrew's ntl and flint packages and 
> build from scratch (distclean), the build would go through.
>
> https://trac.sagemath.org/ticket/27764 and tickets referenced within 
> address the NTL / thread-local storage issues.
>
>
>
>

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Re: [sage-release] Sage 9.2.beta10 released

[david....@gmail.com]

After incremental build from 9.2.beta9, I'm having troubles with 9.2.beta10 
running doctests on macOS 10.15.6.
I can do ./sage -t src/sage/graphs/orientations.py
but ./sage -t src/sage/graphs/graph.py  never ends :(

I can try make dist-clean if we have no other solution... 


sapristi:sage dcoudert$ ./sage -t src/sage/graphs/orientations.py
Running doctests with ID 2020-08-31-11-56-11-afbcd973.
Git branch: develop
Using 
--optional=benzene,bliss,build,dochtml,igraph,plantri,python_igraph,sage,tdlib
Doctesting 1 file.
sage -t --warn-long 135.8 --random-seed=0 src/sage/graphs/orientations.py
[28 tests, 0.25 s]
--
All tests passed!
--
Total time for all tests: 0.3 seconds
cpu time: 0.2 seconds
cumulative wall time: 0.3 seconds
sapristi:sage dcoudert$
sapristi:sage dcoudert$ ./sage -t --verbose src/sage/graphs/graph.py
Running doctests with ID 2020-08-31-11-53-01-8842808d.
Git branch: develop
Using 
--optional=benzene,bliss,build,dochtml,igraph,plantri,python_igraph,sage,tdlib
Doctesting 1 file.
sage -t --warn-long 135.8 --random-seed=0 src/sage/graphs/graph.py
Trying (line 105):d = {0: [1,4,5], 1: [2,6], 2: [3,7], 3: [4,8], 4: 
[9], 5: [7, 8], 6: [8,9], 7: [9]}
Expecting nothing
ok [0.00 s]
Trying (line 107):G = Graph(d); G
Expecting:
Graph on 10 vertices
ok [0.01 s]
Trying (line 109):G.plot().show()# or G.show()
Expecting nothing
^CKilling test src/sage/graphs/graph.py
--
Doctests interrupted: 0/1 files tested
--
Total time for all tests: 88.0 seconds
cpu time: 0.0 seconds
cumulative wall time: 0.0 seconds

Le dimanche 30 août 2020 à 22:06:00 UTC+2, jus...@mac.com a écrit :

>
>
> > On Aug 23, 2020, at 15:15 , Volker Braun  wrote:
> > 
> > As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> Built from fresh clones of the 9.2.b10 tree on three macOS systems: 
> 10.13.6 (2019 iMac Pro, 18-core Xeon W), 10.14.6 (2017 MBP, Quad-core Core 
> i7), and 10.15.6 (2019 MBP, 8-core Core i9).
>
> The builds completed w/o problems on all systems, and all tests passed.
>
> Justin
>
> --
> Justin C. Walker, Curmudgeon-At-Large
> Institute for the Enhancement of the Director's Income
> 
> When LuteFisk is outlawed,
> Only outlaws will have LuteFisk
> 
>
>
>
>

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