Re: [sage-release] Sage 8.8.beta4 released

2019-05-04 Thread fchapoton2
My patchbot atlas only sees the usual remaining failures:

sage -t --long src/sage/graphs/generators/families.py  # 1 doctest failed
sage -t --long src/sage/graphs/generic_graph.py  # 8 doctests failed
sage -t --long src/sage/graphs/graph_database.py  # 1 doctest failed

and not the many failures you talk about.

The best way to round is to use n(...)

Frederic

Le samedi 4 mai 2019 19:32:33 UTC+2, David Coudert a écrit :
>
> Hello,
>
> this release induces many new doctests failures (more than 50) in the 
> graph module with Python3, all related to round.
> For instance:
>
> ┌┐
> │ SageMath version 8.8.beta4, Release Date: 2019-05-04   │
> │ Using Python 3.7.3. Type "help()" for help.│
> └┘
> ┏┓
> ┃ Warning: this is a prerelease version, and it may be unstable. ┃
> ┗┛
> sage: g = graphs.PetersenGraph()
> sage: g.vertex_connectivity()
> ---
> TypeError Traceback (most recent call 
> last)
>  in ()
> > 1 g.vertex_connectivity()
>
>
> /Users/dcoudert/sage3/sage/local/lib/python3.7/site-packages/sage/graphs/connectivity.pyx
>  
> in sage.graphs.connectivity.vertex_connectivity 
> (build/cythonized/sage/graphs/connectivity.c:17319)()
>1451 
>1452 if value_only:
> -> 1453 return Integer(round(p.solve(objective_only=True, log=
> verbose)))
>1454 
>1455 val = Integer(round(p.solve(log=verbose)))
>
> TypeError: type sage.rings.real_double.RealDoubleElement doesn't define 
> __round__ method
>
>
>
> What’s the new proper way to round ?
>
> Thanks,
> David.
>
>
>
> Le 4 mai 2019 à 16:58, Volker Braun > a 
> écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> d765ee2917 (tag: 8.8.beta4, trac/develop) Updated SageMath version to 
> 8.8.beta4
> c2becac662 Trac #27725: pyflakes cleanup in matroids
> 576f0129a7 Trac #27723: pyflakes cleanup in schemes
> 4d8a9c1ea1 Trac #27670: package install can print confusing error messages
> 90333e02a6 Trac #25630: x^y is not good notation for x*y in an exterior 
> algebra
> e1d752014a Trac #27726: some cleanup in quadratic forms
> 848371c847 Trac #27719: Preparser for file.sage: treat "from __future__ 
> import ..." properly
> d3470b29ab Trac #27710: py3 Fixing combinat/tutorial.py
> 98d974e06b Trac #27693: py3: fix src/sage/misc/classcall_metaclass.pyx
> 82ad988310 Trac #27138: pep8 in digraph_generators.py (part 5)
> 1c481bfa6a Trac #20181: number_field_elements_from_algebraics should 
> create embedded number field elements
> 7f99a17e58 Trac #27730: replace EXEMPLES by EXAMPLES
> b13a874085 Trac #27729: new recolt of typos
> 5d824f4304 Trac #27727: py3: fix repr and iter for submultisets
> 947b6080db Trac #27722: Remove old deprecation warning of Minkowski -> 
> minkowski
> a8ddb6e19f Trac #27716: Refactor backend_normaliz
> 37d49c1e4a Trac #27715: Jupyter notebook can crash during startup if 
> default port cannot be used
> 1e8485e89f Trac #27709: The attribute `_vector` of H and V representation 
> is exposed
> efa7ae2410 Trac #27682: upgrade normaliz to 3.7.1, pynormaliz to 2.1 and 
> package e-antic
> 3b3e60dc66 Trac #27663: refresh our citation sentence
> 867c86c849 Trac #27662: Upgrade to primecount 4.7
> c6fcbe33bf Trac #26681: extend pushout constructions of growth groups
> e4886bc5e2 Trac #26340: polytopes.snub_cube should allow exact coordinates
> 38904fffc7 Trac #26049: Implement the rank 2 Heisenberg-Virasoro (Lie) 
> algebra
> 5dd94d1ceb Trac #27713: Patch pynac to build properly with Cygwin's system 
> GMP
> aa4a5e29ff Trac #27558: Global function fields: last fixes and additions
> 5c27827a98 Trac #27137: pep8 in digraph_generators.py (part 4)
> 1ed2f76be5 Trac #18855: breadth_first_search return edges
> e6a8409cd3 Trac #27698: py3: fix one doctest in doc/en
> a1cd5c83a9 Trac #27697: Make pplpy doc location configurable
> 756aa054ad Trac #27695: Produce consistent graph6 and dig6 strings in 
> python3
> 1d0020f606 Trac #27694: Make L. syntax work for LazyLaurentSeriesRing
> 1b08f0b49c Trac #27691: py3: care for two files in misc
> 219949ce78 Trac #27690: unicode art for knots
> 4791f731d2 Trac #27684: Upgrade dot2tex to 2.11.3
> 7d4bdb9db2 Trac #27679: py3: finite state machines
> 9ef37ae179 Trac #27635: Allow tests that are specific to Sage's build 
> system to be skipped
> 07510b807c Trac #27633: Redesign of the constructor for Hyperelliptic 
> curves
> a5a41f3667 Trac #27628: py3: fix doctest with igraph
> 3e5acef10a Trac #27570: Minimal weight cycle basis Implementation
> 

Re: [sage-release] Sage 8.8.beta3 released

2019-04-29 Thread fchapoton2
Maybe your computer is *too fast* ?

What is the result of manually running the following line:

run_doctests(sage.rings.infinity)

On my computer, I get with python3

too few successful tests, not using stored timings
Running doctests with ID 2019-04-29-10-37-46-21ab2187.
Git branch: develop
Using --optional=sage
Doctesting 1 file.
sage -t /home/chapoton/sage3/src/sage/rings/infinity.py
[299 tests, 4.01 s]
--
All tests passed!
--
Total time for all tests: 8.6 seconds
cpu time: 1.4 seconds
cumulative wall time: 4.0 seconds

And the timing is between 1 and 3 seconds in other configurations.

Frederic

Le mardi 23 avril 2019 13:14:07 UTC+2, Clemens Heuberger a écrit :
>
> The logfile I posted earlier was produced outside the patchbot. 
>
>
>
> Am 23.04.19 um 13:10 schrieb Daniel Krenn: 
> > On 23.04.19 12:55, Clemens Heuberger wrote: 
> >> Am 23.04.19 um 12:30 schrieb Clemens Heuberger: 
> >>> On one of my patchbots 
> >>> 
> >>>   
> https://patchbot.sagemath.org/log/0/LinuxMint/18.2/x86_64/4.4.0-138-generic/rk02-math/2019-04-20%2005:53:22
>  
> > 
> > FWIW, this patchbot got updated to the latest version 2.8.2.dev0 a few 
> > days ago. (was on 2.8.0.dev before). 
> > 
>
>
>

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[sage-release] Re: Sage 8.7.rc0 released

2019-03-20 Thread fchapoton2
Failure to build "zn_poly" with python3 on one machine, 
see  https://trac.sagemath.org/ticket/27476#comment:8 and discussion that 
follows

Frédéric

Le mercredi 20 mars 2019 00:03:34 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> 2a9c447e04 (tag: 8.7.rc0, trac/develop) Updated SageMath version to 8.7.rc0
> f2a89574b1 Trac #27214: libgap memory allocation on Cygwin
> 593f669d66 Trac #27490: Simplistic multiprocessing.Pool replacement for 
> parallel docbuild on older Cygwin
> b5437289a5 Trac #27489: *** SIG 14 *** outside sig_on
> b1a58d9670 Trac #27461: Minor test failure on Cygwin in 
> ComplexDoubleElement._pow_
> a6041ad3e8 Trac #27421: .coefficient of multi-variate polynomial should 
> accept output of .exponents()
> eb8d110a06 Trac #27485: Use sdh_cmake for configuring primecount
> 1cfb97ac95 Trac #27484: Add sdh_cmake helper
> 56d6b08c80 Trac #27476: Add patch to zn_poly for support for Python 2.6
> cca8152c2f Trac #27474: some care for BAD references in finite_word.py
> 02461b6b07 Trac #27440: py3: fixing the hash of real and complex lazy 
> fields
> d0b17b1c6f Trac #27418: Global function fields: completions
> 5f48119306 Trac #27463: Sage cannot open a Jupyter notebook directly
> 4b93d20a42 Trac #27070: Upgrade to Cysignals 1.10.2
> c26f30d8fa Trac #27471: py3:fix last doctest in affine_curve.py
> 5fab23be51 Trac #27470: MR10: Update trac.rst
> ec80f14992 Trac #27466: py3: modules/with_basis/morphism.py
> ff54389b61 Trac #27432: py3: fix last doctest in ell_rational_field
> 492be643fb Trac #27374: make_any_gap_element() should not be called inside 
> sig_on(), part 2
> c28b99ccab Trac #24101: Implement Katz centrality and related methods for 
> graphs
> a8a19809f6 Trac #24094: Effective Resistance for Graphs
> ae38e0e0c8 Trac #23052: operations between sage and gmpy2 numbers
> a343db4f1c Trac #22574: Add .change_ring() method for polyhedra
> 1432f483a6 Trac #9707: Add a "signless" option to laplacian
> 6edd9ad92c Trac #27215: Remove broken SAGE_BUILD_TOOLCHAIN support
> b6455b8dcc Trac #27458: some cleanup in elliptic curves
> 1e2dc5b15b Trac #27436: Update Link to PRESENT paper
> ab8ee51c4b Trac #27455: remove the deprecated file dict_addition
> acbf6b4396 Trac #27430: more choices of algorithms for Coxeter Smith form 
> of posets
> e5f1759a36 Trac #27283: documentation for ModularSymbols says that only 
> weight 2 is supported, but any weight at least 2 is supported
> db49315d16 Trac #27460: fix issue in graph_plot_js
> f149a665e0 Trac #27459: py3: fix again doctests in matrix groups
> 27327cba7b Trac #27456: py3: fix one file in sets/
> f8944c1684 Trac #27454: py3: partial fix for crypto/lwe
> 4e1a6a2e44 Trac #27453: py3: fix last doctest in soliton.py
> f6d2c6a3c4 Trac #27452: py3: fundamental group of simplicial complexes
> 024c0d4b4f Trac #27451: speedup of induced trivial character basis
> f570e3a7fc Trac #27360: upgrade eclib to v20190226
> bc7c117e21 Trac #27346: py3: fix FindStat interface and FancyTuple
> a49f71755b Trac #27359: Test for sage_makedirs breaks Sage on Windows
> 9c2af6989e Trac #27439: Py3: Fix bounded_integer_sequences.pyx for python3.
> 76b7b821ac Trac #27443: spring cleanup for QQbar
> 73d5bfd712 Trac #27135: pep8 in digraph_generators.py (part 2)
> 7bc1a37192 Trac #27449: py3: fix all doctests in schemes/product_projective
> 54cd3d6430 Trac #27441: Add more trig functions to complex_arb and real_arb
> 5d5f495eb5 Trac #27427: Don't use bare except: statements
> ea852a4ea0 Trac #14999: subgraph_search does not like labeled edges
> d982527e6a Trac #27438: Properly re-enable USE_TLS=1 when building 
> OpenBLAS SPKG
> 10407524b1 (tag: 8.7.beta7) Updated SageMath version to 8.7.beta7
>
>

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Re: [sage-release] Re: Sage 8.7.beta0 released

2019-01-24 Thread fchapoton2
installing libffi-dev on the system and doing ./configure fixed the 
problem. Thanks !

Le jeudi 24 janvier 2019 13:45:37 UTC+1, E. Madison Bray a écrit :
>
> On Thu, Jan 24, 2019 at 9:40 AM > wrote: 
> > 
> > I have the same issue with libffi ! 
>
> I will look into that ASAP.  It's a similar / related problem to 
> https://trac.sagemath.org/ticket/26996 but affecting libffi.  The 
> install target for libffi might even depend on your compiler's 
> settings, which might explain why this didn't happen (at least that 
> I'm aware) on Debian-based distros where gcc does not install 
> libraries to ${prefix}/lib64. 
>
> Also, if you have your system's libffi-devel package installed and 
> it's recent enough, Sage's ./configure should detect it and skip 
> trying to install the libffi SPKG altogether. 
>
> > Le jeudi 24 janvier 2019 06:08:53 UTC+1, Steven Trogdon a écrit : 
> >> 
> >> Problem building libffi-3.2.1 on gentoo 
> >> 
> >> cp: cannot overwrite non-directory 
> '/64bitdev/storage/sage-git_develop/sage/local/./lib64' with directory 
> '/64bitdev/storage/sage-git_develop/sage/local/var/tmp/sage/build/libffi-3.2.1/inst/64bitdev/storage/sage-git_develop/sage/local/./lib64'
>  
>
> >> 
>  
> >> Error copying files for libffi-3.2.1. 
> >> 
>  
> >> 
> >> /64bitdev/storage/sage-git_develop/sage/local/./lib64 
> >> 
> >> is a symlink 
> >> 
> >> ls -al /64bitdev/storage/sage-git_develop/sage/local/./lib64 
> >> lrwxrwxrwx 1 strogdon math 3 Jan 13  2016 
> /64bitdev/storage/sage-git_develop/sage/local/./lib64 -> lib 
> >> 
> >> On Wednesday, January 23, 2019 at 2:47:49 PM UTC-6, Volker Braun wrote: 
> >>> 
> >>> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
> >>> 
> >>> 5389d8dc87 (tag: 8.7.beta0, trac/develop) Updated SageMath version to 
> 8.7.beta0 
> >>> 36ec29e57d Trac #26969: Misc pip upgrades 
> >>> 79cf5c980d Trac #27023: fix missing :: 
> >>> a4dd7deefc Trac #27020: OpenBLAS 0.3.5 
> >>> e60f32bb91 Trac #27017: Remove sage.schemes.elliptic_curves.padics 
> from documentation 
> >>> 4fb44bc920 Trac #27014: Deprecate sage.misc.misc.uniq 
> >>> c128368a45 Trac #27013: py3: some care for Hadamard matrices 
> >>> 6521233113 Trac #27010: py3: avoid .vertices() in methods 
> _ford_fulkerson, edge_cut, bounded_outdegree_orientation and gomory_hu_tree 
> >>> 58d9680bbe Trac #27009: py3: avoid sorting vertices and edges in 
> method treewidth 
> >>> 1ad58d2bb9 Trac #27008: py3: avoid .vertices() in method apex_vertices 
> >>> 010e1e893b Trac #27007: py3: avoid .vertices() in planarity.pyx 
> >>> c14dc9c46f Trac #27005: wrong libgap conversion for matrices over 
> QQ['x'] 
> >>> 7123d7504d Trac #27003: _iterator_weight should not sort 
> >>> 48484ef69d Trac #27002: autodoc: use __qualname__ on Python 3 
> >>> 57c5c40661 Trac #26999: 1 optional gurobi doctest failing 
> >>> ee7ed3c076 Trac #26998: py3 fix last 4 failing doctests in 
> combinat/posets 
> >>> 23f806cad2 Trac #26997: 5 internet doctests failing in findstat.py 
> >>> 0698bfb999 Trac #26995: Upgrade to Pynac-0.7.23 
> >>> 619281186a Trac #23222: Add test to EllipticCurve.isogeny() to check 
> for validity of kernel polynomials 
> >>> 4f560b02dc Trac #26988: py3: one tiny fix for isidentifier 
> >>> 90c3b31954 Trac #26985: some work on cluster mutation 
> >>> ee2d9c5657 Trac #26981: fix trac ticket number in deprecation warning 
> >>> 24186b661f Trac #26967: py3: some work on 
> modular/modform_hecketriangle/ 
> >>> 2f73854033 Trac #26958: Inheriting from MPolynomialRing_libsingular 
> crashes sage 
> >>> 319b7ac911 Trac #26943: Giac support for term orders and elimination 
> >>> 537b91840d Trac #26938: IncidenceStructure breaks if points cannot be 
> sorted 
> >>> 37065d12db Trac #26936: WordMorphism: domain/codomain should be 
> sortable if not given 
> >>> cdab354eeb Trac #26933: Subsets_s should support unsortable sets 
> >>> 6a818ec5e1 Trac #26917: py3: some fix in set_partition 
> >>> be09cc219f Trac #26864: Indentation error in Number Field 
> >>> a915a3ab1a Trac #26839: RealLazyField: converting constants in an 
> expression to float 
> >>> cefb74fd8c Trac #26834: pep8 cleaning in vertex_separation.pyx 
> >>> c6125397b3 Trac #26810: Permutations(avoiding=[[1,3,2]]) returns all 
> permutations 
> >>> 52633235e2 Trac #26809: Wrong contains in Permutations avoiding a 
> pattern 
> >>> 33ec2f8202 Trac #26516: Wrong sig_on_count in SharedMeatAxe 
> >>> faab330692 Trac #26361: Glucose SAT solver 
> >>> ce239b2e40 Trac #26183: doctest: tolerance parsing and ellipses 
> >>> 580c25bd1c Trac #26156: 0.0 is printed with too many digits 
> >>> ddfe6f3a20 Trac #25931: changes to partition for k combinat 
> >>> 08166d10a2 Trac #25900: Package libffi 
> >>> 35931ca890 Trac #2586

[sage-release] Re: Sage 8.7.beta0 released

2019-01-24 Thread fchapoton2
This libffi warning/failure does not prevent sage to run and work. It 
prevents my patchbot to work correctly though.

Le jeudi 24 janvier 2019 09:40:52 UTC+1, fchap...@gmail.com a écrit :
>
> I have the same issue with libffi !
>
> Le jeudi 24 janvier 2019 06:08:53 UTC+1, Steven Trogdon a écrit :
>>
>> Problem building libffi-3.2.1 on gentoo
>>
>> cp: cannot overwrite non-directory 
>> '/64bitdev/storage/sage-git_develop/sage/local/./lib64' with directory 
>> '/64bitdev/storage/sage-git_develop/sage/local/var/tmp/sage/build/libffi-3.2.1/inst/64bitdev/storage/sage-git_develop/sage/local/./lib64'
>> 
>> Error copying files for libffi-3.2.1.
>> 
>>
>> /64bitdev/storage/sage-git_develop/sage/local/./lib64
>>
>> is a symlink
>>
>> ls -al /64bitdev/storage/sage-git_develop/sage/local/./lib64
>> lrwxrwxrwx 1 strogdon math 3 Jan 13  2016 
>> /64bitdev/storage/sage-git_develop/sage/local/./lib64 -> lib
>>
>> On Wednesday, January 23, 2019 at 2:47:49 PM UTC-6, Volker Braun wrote:
>>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html
>>>
>>> 5389d8dc87 (tag: 8.7.beta0, trac/develop) Updated SageMath version to 
>>> 8.7.beta0
>>> 36ec29e57d Trac #26969: Misc pip upgrades
>>> 79cf5c980d Trac #27023: fix missing ::
>>> a4dd7deefc Trac #27020: OpenBLAS 0.3.5
>>> e60f32bb91 Trac #27017: Remove sage.schemes.elliptic_curves.padics from 
>>> documentation
>>> 4fb44bc920 Trac #27014: Deprecate sage.misc.misc.uniq
>>> c128368a45 Trac #27013: py3: some care for Hadamard matrices
>>> 6521233113 Trac #27010: py3: avoid .vertices() in methods 
>>> _ford_fulkerson, edge_cut, bounded_outdegree_orientation and gomory_hu_tree
>>> 58d9680bbe Trac #27009: py3: avoid sorting vertices and edges in method 
>>> treewidth
>>> 1ad58d2bb9 Trac #27008: py3: avoid .vertices() in method apex_vertices
>>> 010e1e893b Trac #27007: py3: avoid .vertices() in planarity.pyx
>>> c14dc9c46f Trac #27005: wrong libgap conversion for matrices over QQ['x']
>>> 7123d7504d Trac #27003: _iterator_weight should not sort
>>> 48484ef69d Trac #27002: autodoc: use __qualname__ on Python 3
>>> 57c5c40661 Trac #26999: 1 optional gurobi doctest failing
>>> ee7ed3c076 Trac #26998: py3 fix last 4 failing doctests in 
>>> combinat/posets
>>> 23f806cad2 Trac #26997: 5 internet doctests failing in findstat.py
>>> 0698bfb999 Trac #26995: Upgrade to Pynac-0.7.23
>>> 619281186a Trac #23222: Add test to EllipticCurve.isogeny() to check for 
>>> validity of kernel polynomials
>>> 4f560b02dc Trac #26988: py3: one tiny fix for isidentifier
>>> 90c3b31954 Trac #26985: some work on cluster mutation
>>> ee2d9c5657 Trac #26981: fix trac ticket number in deprecation warning
>>> 24186b661f Trac #26967: py3: some work on modular/modform_hecketriangle/
>>> 2f73854033 Trac #26958: Inheriting from MPolynomialRing_libsingular 
>>> crashes sage
>>> 319b7ac911 Trac #26943: Giac support for term orders and elimination
>>> 537b91840d Trac #26938: IncidenceStructure breaks if points cannot be 
>>> sorted
>>> 37065d12db Trac #26936: WordMorphism: domain/codomain should be sortable 
>>> if not given
>>> cdab354eeb Trac #26933: Subsets_s should support unsortable sets
>>> 6a818ec5e1 Trac #26917: py3: some fix in set_partition
>>> be09cc219f Trac #26864: Indentation error in Number Field
>>> a915a3ab1a Trac #26839: RealLazyField: converting constants in an 
>>> expression to float
>>> cefb74fd8c Trac #26834: pep8 cleaning in vertex_separation.pyx
>>> c6125397b3 Trac #26810: Permutations(avoiding=[[1,3,2]]) returns all 
>>> permutations
>>> 52633235e2 Trac #26809: Wrong contains in Permutations avoiding a pattern
>>> 33ec2f8202 Trac #26516: Wrong sig_on_count in SharedMeatAxe
>>> faab330692 Trac #26361: Glucose SAT solver
>>> ce239b2e40 Trac #26183: doctest: tolerance parsing and ellipses
>>> 580c25bd1c Trac #26156: 0.0 is printed with too many digits
>>> ddfe6f3a20 Trac #25931: changes to partition for k combinat
>>> 08166d10a2 Trac #25900: Package libffi
>>> 35931ca890 Trac #25865: fast iterator for set partitions with given 
>>> block sizes
>>> 7aa39995c5 Trac #25480: Upgrade to cryptominisat 5.6.6 (and make it an 
>>> optional package again)
>>> 41153919eb Trac #25384: Let `sage --jupyter` call the Jupyter in Sage
>>> ec0b3f610b Trac #25147: Add DESTDIR support for boost_cropped
>>> a3ee80c6cb Trac #25143: Add DESTDIR support for pari
>>> 137ad44b65 Trac #25100: Add DESTDIR support for gfan, lcalc, ratpoints, 
>>> rubiks, symmetrica
>>> d8f5ab4875 Trac #18214: Bug in volume computation of polyhedron
>>> 9b3ae6af92 Trac #27024: update sagetex to version 3.2
>>> 4a7f20f562 Trac #26966: py3: new doctest failures in homology
>>> 3d09a80bb4 Trac #26962: Logarithm of rational numbers is broken
>>> d6f2242df4 Trac #26907: E

[sage-release] Re: Sage 8.7.beta0 released

2019-01-24 Thread fchapoton2
I have the same issue with libffi !

Le jeudi 24 janvier 2019 06:08:53 UTC+1, Steven Trogdon a écrit :
>
> Problem building libffi-3.2.1 on gentoo
>
> cp: cannot overwrite non-directory 
> '/64bitdev/storage/sage-git_develop/sage/local/./lib64' with directory 
> '/64bitdev/storage/sage-git_develop/sage/local/var/tmp/sage/build/libffi-3.2.1/inst/64bitdev/storage/sage-git_develop/sage/local/./lib64'
> 
> Error copying files for libffi-3.2.1.
> 
>
> /64bitdev/storage/sage-git_develop/sage/local/./lib64
>
> is a symlink
>
> ls -al /64bitdev/storage/sage-git_develop/sage/local/./lib64
> lrwxrwxrwx 1 strogdon math 3 Jan 13  2016 
> /64bitdev/storage/sage-git_develop/sage/local/./lib64 -> lib
>
> On Wednesday, January 23, 2019 at 2:47:49 PM UTC-6, Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>> 5389d8dc87 (tag: 8.7.beta0, trac/develop) Updated SageMath version to 
>> 8.7.beta0
>> 36ec29e57d Trac #26969: Misc pip upgrades
>> 79cf5c980d Trac #27023: fix missing ::
>> a4dd7deefc Trac #27020: OpenBLAS 0.3.5
>> e60f32bb91 Trac #27017: Remove sage.schemes.elliptic_curves.padics from 
>> documentation
>> 4fb44bc920 Trac #27014: Deprecate sage.misc.misc.uniq
>> c128368a45 Trac #27013: py3: some care for Hadamard matrices
>> 6521233113 Trac #27010: py3: avoid .vertices() in methods 
>> _ford_fulkerson, edge_cut, bounded_outdegree_orientation and gomory_hu_tree
>> 58d9680bbe Trac #27009: py3: avoid sorting vertices and edges in method 
>> treewidth
>> 1ad58d2bb9 Trac #27008: py3: avoid .vertices() in method apex_vertices
>> 010e1e893b Trac #27007: py3: avoid .vertices() in planarity.pyx
>> c14dc9c46f Trac #27005: wrong libgap conversion for matrices over QQ['x']
>> 7123d7504d Trac #27003: _iterator_weight should not sort
>> 48484ef69d Trac #27002: autodoc: use __qualname__ on Python 3
>> 57c5c40661 Trac #26999: 1 optional gurobi doctest failing
>> ee7ed3c076 Trac #26998: py3 fix last 4 failing doctests in combinat/posets
>> 23f806cad2 Trac #26997: 5 internet doctests failing in findstat.py
>> 0698bfb999 Trac #26995: Upgrade to Pynac-0.7.23
>> 619281186a Trac #23222: Add test to EllipticCurve.isogeny() to check for 
>> validity of kernel polynomials
>> 4f560b02dc Trac #26988: py3: one tiny fix for isidentifier
>> 90c3b31954 Trac #26985: some work on cluster mutation
>> ee2d9c5657 Trac #26981: fix trac ticket number in deprecation warning
>> 24186b661f Trac #26967: py3: some work on modular/modform_hecketriangle/
>> 2f73854033 Trac #26958: Inheriting from MPolynomialRing_libsingular 
>> crashes sage
>> 319b7ac911 Trac #26943: Giac support for term orders and elimination
>> 537b91840d Trac #26938: IncidenceStructure breaks if points cannot be 
>> sorted
>> 37065d12db Trac #26936: WordMorphism: domain/codomain should be sortable 
>> if not given
>> cdab354eeb Trac #26933: Subsets_s should support unsortable sets
>> 6a818ec5e1 Trac #26917: py3: some fix in set_partition
>> be09cc219f Trac #26864: Indentation error in Number Field
>> a915a3ab1a Trac #26839: RealLazyField: converting constants in an 
>> expression to float
>> cefb74fd8c Trac #26834: pep8 cleaning in vertex_separation.pyx
>> c6125397b3 Trac #26810: Permutations(avoiding=[[1,3,2]]) returns all 
>> permutations
>> 52633235e2 Trac #26809: Wrong contains in Permutations avoiding a pattern
>> 33ec2f8202 Trac #26516: Wrong sig_on_count in SharedMeatAxe
>> faab330692 Trac #26361: Glucose SAT solver
>> ce239b2e40 Trac #26183: doctest: tolerance parsing and ellipses
>> 580c25bd1c Trac #26156: 0.0 is printed with too many digits
>> ddfe6f3a20 Trac #25931: changes to partition for k combinat
>> 08166d10a2 Trac #25900: Package libffi
>> 35931ca890 Trac #25865: fast iterator for set partitions with given block 
>> sizes
>> 7aa39995c5 Trac #25480: Upgrade to cryptominisat 5.6.6 (and make it an 
>> optional package again)
>> 41153919eb Trac #25384: Let `sage --jupyter` call the Jupyter in Sage
>> ec0b3f610b Trac #25147: Add DESTDIR support for boost_cropped
>> a3ee80c6cb Trac #25143: Add DESTDIR support for pari
>> 137ad44b65 Trac #25100: Add DESTDIR support for gfan, lcalc, ratpoints, 
>> rubiks, symmetrica
>> d8f5ab4875 Trac #18214: Bug in volume computation of polyhedron
>> 9b3ae6af92 Trac #27024: update sagetex to version 3.2
>> 4a7f20f562 Trac #26966: py3: new doctest failures in homology
>> 3d09a80bb4 Trac #26962: Logarithm of rational numbers is broken
>> d6f2242df4 Trac #26907: Exact division in ℤ[x][y] is broken
>> 6abcb72592 (tag: 8.6, trac/master, sagemath/master) Updated SageMath 
>> version to 8.6
>>
>>

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[sage-release] Re: Sage 8.6.rc1 released

2019-01-13 Thread fchapoton2
This is the second consecutive beta release where the progress towards 
python3 is going backwards, in the sense that more files have failing 
doctests.

Maybe it will soon be time to ask developers to check everything on python3 
? Maybe having a python3 buildbot would be good ?

F

Le samedi 12 janvier 2019 21:56:03 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> The final 8.6 should follow real soon, so please give it a whirl!
>
> 62fe3948ea (tag: 8.6.rc1, trac/develop) Updated SageMath version to 8.6.rc1
> 4c97235a2c Trac #26001: Upgrade p_group_cohomology to version 3.1
> e9df9ef053 Trac #26326: Upgrade networkx to 2.2, add self tests, and 
> update random seed format
> 71f5ae815c (tag: 8.6.rc0) Updated SageMath version to 8.6.rc0
>
>

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[sage-release] Re: Sage 8.5.beta6 released

2018-12-03 Thread fchapoton2
Yes, "make doc" failure on python 3 is an important known problem, not 
currently investigated by anybody. It's a bit sad to be apparently so close 
to make it work,and to be stalled after so much work on that.

Frederic

Le lundi 3 décembre 2018 15:25:38 UTC+1, Eric Gourgoulhon a écrit :
>
> Le lundi 3 décembre 2018 14:23:47 UTC+1, Eric Gourgoulhon a écrit :
>>
>>  
>>
> - python3: 
>>   - incremental build (-j16) from 8.5.beta5 OK
>>
>
>
> PS: python3 "make doc" seems to go quite far, before failing with 
>
> [dochtml] OSError: 
> /home/eric/sage/py3/src/doc/en/reference/categories/sage/categories/facade_sets.rst:4:
>  
> WARNING: undefined label: facade-sets (if the link has no caption the label 
> must precede a section header)
>
>
>
>
>  
>> Eric. 
>>
>>
>>

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Re: [sage-release] Re: Sage 8.5.beta5 released

2018-11-28 Thread fchapoton2
Could be caused by https://trac.sagemath.org/ticket/26702

Le mercredi 28 novembre 2018 09:49:53 UTC+1, François Bissey a écrit :
>
> That’s interesting. I thought the failures in sage/databases/sql_db.py in 
> sage-on-gentoo 
> were due to the use of a newer version of sqlite. But if you see it too 
> that must be something 
> more subtle. 
>
> François 
>
> > On 28/11/2018, at 21:46, Sébastien Labbé > 
> wrote: 
> > 
> > On Ubuntu 16.04, the command 
> > 
> > sage -t --all --optional=sage,optional,external 
> > 
> > tests the following optional and external doctests: 
> > 
> > Using 
> --optional=bliss,cbc,ccache,cmake,dot2tex,external,gmpy2,lrslib,memlimit,mpir,normaliz,notedown,pandoc_attributes,pycosat,pynormaliz,python2,rst2ipynb,sage
>  
>
> > External software detected for doctesting: 
> ffmpeg,graphviz,gurobi,imagemagick,internet,latex,pandoc 
> > 
> > 
> > and gives All tests passed except the following ones: 
> > 
> > -- 
> > sage -t --long src/sage/databases/findstat.py  # 5 doctests failed 
> > sage -t --long src/sage/symbolic/integration/integral.py  # 1 doctest 
> failed 
> > sage -t --long src/sage/combinat/tutorial.py  # 1 doctest failed 
> > sage -t --long src/sage/symbolic/integration/external.py  # 3 doctests 
> failed 
> > sage -t --long src/sage/combinat/designs/ext_rep.py  # 1 doctest failed 
> > sage -t --long src/sage/repl/load.py  # 1 doctest failed 
> > sage -t --long src/sage/misc/persist.pyx  # 2 doctests failed 
> > sage -t --long src/sage/databases/sql_db.py  # 2 doctests failed 
> > -- 
> > 
> > 
> > Follow up at https://trac.sagemath.org/ticket/25536. New failures are 
> copied below. 
> > 
> > 
> > 
> > sage -t --long src/sage/combinat/tutorial.py 
> > ** 
> > File "src/sage/combinat/tutorial.py", line 224, in 
> sage.combinat.tutorial 
> > Failed example: 
> > oeis([1,1,2,5,14])# optional -- internet 
> > Expected: 
> > 0: A000108: Catalan numbers: C(n) = binomial(2n,n)/(n+1) = 
> (2n)!/(n!(n+1)!). Also called Segner numbers. 
> > 1: A120588: G.f. satisfies: 3*A(x) = 2 + x + A(x)^2, with a(0) = 1. 
> > 2: ... 
> > Got: 
> > 0: A000108: Catalan numbers: C(n) = binomial(2n,n)/(n+1) = 
> (2n)!/(n!(n+1)!). Also called Segner numbers. 
> > 1: A124302: Number of set partitions with at most 3 blocks; number 
> of Dyck paths of height at most 4; dimension of space of symmetric 
> polynomials in 3 noncommuting variables. 
> > 2: A120588: G.f. satisfies: 3*A(x) = 2 + x + A(x)^2, with a(0) = 1. 
> > ** 
> > 1 item had failures: 
> >1 of 249 in sage.combinat.tutorial 
> > 5 tests for not implemented functionality not run 
> > 6 not tested tests not run 
> > 0 tests not run because we ran out of time 
> > [248 tests, 1 failure, 24.70 s] 
> > 
> > 
> > sage -t --long src/sage/databases/sql_db.py 
> > ** 
> > File "src/sage/databases/sql_db.py", line 956, in 
> sage.databases.sql_db.SQLDatabase.__init__ 
> > Failed example: 
> > D.show('simon') 
> > Expected: 
> > graph6   vertices edges 
> >  
> > ?00 
> > @10 
> > A?   20 
> > A_   21 
> > B?   30 
> > BG   31 
> > BW   32 
> > Bw   33 
> > C?   40 
> > C@   41 
> > CB   42 
> > CF   43 
> > CJ   43 
> > CK   42 
> > CL   43 
> > CN   44 
> > C]   44 
> > C^   45 
> > C~   46 
> > Got: 
> > graph6   vertices edges   
> >  
> > ?00   
> > @10   
> > A?   20   
> > A_   21   
> > B?   30   
> >   

Re: [sage-release] Re: Sage 8.5.beta3 released

2018-11-12 Thread fchapoton2
well, my opinion would be to remove the doc building in sagenb 
spkg-install.. When I comment these lines, everything works fine.

Because this tries to import sage.all, this can only work if sage is 
considered to be fully built..

F

Le lundi 12 novembre 2018 11:15:12 UTC+1, Erik Bray a écrit :
>
> On Mon, Nov 12, 2018 at 10:51 AM Eric Gourgoulhon 
> > wrote: 
> > 
> > Le lundi 12 novembre 2018 08:45:59 UTC+1, fchap...@gmail.com a écrit : 
> >> 
> >> This seems to break almost all the patchbots. Problem building the 
> sagenb doc, probably. 
> > 
> > 
> > Confirmed: incremental build from Sage 8.5.beta2 yields: 
> > 
> > Error building Sage. 
> > 
> > The following package(s) may have failed to build (not necessarily 
> > during this run of 'make all-start'): 
> > 
> > * package: sagenb-1.1.1 
> >   log file: /home/eric/sage/develop2/logs/pkgs/sagenb-1.1.1.log 
> >   build directory: 
> /home/eric/sage/develop2/local/var/tmp/sage/build/sagenb-1.1.1 
> > 
> > sagenb-1.1.1.log contains: 
> > 
> > Exception occurred: 
> >   File "sage/misc/lazy_import.pyx", line 218, in 
> sage.misc.lazy_import.LazyImport._get_object 
> (build/cythonized/sage/misc/lazy_import.c:2412) 
> > raise RuntimeError(f"resolving lazy import {self._name} during 
> startup") 
> > RuntimeError: resolving lazy import dumps during startup 
> > The full traceback has been saved in /tmp/sphinx-err-grvYRv.log, if you 
> want to report the issue to the developers. 
> > 
> > I am attaching both sagenb-1.1.1.log and sphinx-err-grvYRv.log. 
>
> FWIW our incremental builds on the GitLab pipeline have been having 
> this problem ever since 8.5.beta1, so the problem started even before 
> now: https://gitlab.com/sagemath/sage/-/jobs/115598440  I think there 
> might just be a missing dependency for the new sagenb package... 
>
> I thought the problem might just be with the gitlab builds themselves, 
> but it seems maybe not if others are reporting this.  The problem 
> started there with 8.5.beta1 (beta0 worked fine). 
>

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[sage-release] Re: Sage 8.5.beta3 released

2018-11-11 Thread fchapoton2
This seems to break almost all the patchbots. Problem building the sagenb 
doc, probably.

Frederic

Le lundi 12 novembre 2018 00:33:09 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> 8dafc4e9d3 (tag: 8.5.beta3) Updated SageMath version to 8.5.beta3
> 3c1e3bf842 Trac #26658: clean generic_graph.py (part 7) - planarity
> 58c231fca8 Trac #26653: clean connectivity.pyx (part 2)
> 8ded88dab6 Trac #26643: Upgrade to NumPy 1.15.4
> 660453f6f0 Trac #26487: Document that isogenies_prime_degree() only finds 
> separable isogenies
> 428fc1d759 Trac #25261: Upgrade to GSL 2.5
> a5dab380f1 Trac #26660: Fix changes from #25857 that were accidentally 
> reverted by #25188
> 13c6528fb9 Trac #26656: py3: keep reduce in global namespace
> 31e96ba67b Trac #26652: py3: sortkey for affine weight spaces
> 9c700dd3a6 Trac #26651: py3: fix repr of callable dict
> c0b95caeea Trac #25874: Conversions between S unit group and number field 
> are not each others inverse
> f882a57794 Trac #24919: Generic mechanism for system package checks at 
> configure time
> 8dc0a8ea89 Trac #25888: Bug in equivalence testing of binary quadratic 
> forms
> e466ed9f2a Trac #26648: py3: fix doctests in diamond_cutting
> fe5d82beec Trac #24758: py3: minor fixes to sage.functions
> 1adb908c39 Trac #26649: Py3: Fixes in combinat/root_system module
> 88c655 Trac #26647: more trac and remove deprecated alias for matrix 
> inverse
> cc2a9b1a00 Trac #26146: py3: doctests AsymptoticRing
> 083c87e958 Trac #26641: Repackage sagenb
> 55ad4dc68e Trac #26629: py3: cleanup of cyclic sieving
> 6af48dde3c Trac #26279: Improve comparisons of PolyDicts
> c2d296e2db Trac #26276: py3: misc fixes for sage.modules
> fba3b0cc5e Trac #26190: Upgrade latte_int to 1.7.5
> 471ee047b1 Trac #26646: py3: fix doctests in Weyl algebra
> b2b008ed95 Trac #26645: py3: some fixes in graph generators
> f7a801deaa Trac #26638: py3: one fix in rigged configurations
> 1dca5ec1bb Trac #26637: clean generic_graph.py (part 6)
> aa16d92c33 Trac #26636: py3: fix doctests in geometry/cone
> e2e31f3d8c Trac #26632: improve method distance_matrix
> a61efe03fb Trac #26631: py3 minor fixes in numerical
> 32cb1362a8 Trac #26627: clean generic_graph.py (part 2)
> fb9c99e2c8 Trac #26626: py3: fix doctests in misc/c3_controlled
> af2dac9244 Trac #26624: clean generic_graph.py (part 1)
> 748cced040 Trac #26622: avoid using .vertices() in convexity_properties.pyx
> c3e4ea3b74 Trac #26621: clean bliss.pyx
> db1a427228 Trac #26618: avoid using .vertices() in centrality.pyx
> 6508f6d2db Trac #26617: py3: some care for division in range
> b41b5ea2cc Trac #26613: sagenb fails to build due to missing dependencies
> bbe94a31ee Trac #26607: small cleanup of the doc of Weyl character ring
> d04eb00076 Trac #26605: fix some magma/groebner log failing doctests
> 63050dc186 Trac #26603: Bugfix in bruhat_lower_covers
> c966bf5cc9 Trac #26559: Bug in DiGraph.spectral_radius()
> f7f1853628 Trac #26527: py3 work on automorphism groups of graphs
> 83175731ff Trac #26195: Tate algebras
> b86c2e15db Trac #23214: enhance sparse integer matrix with linbox (+ 
> cleaning)
> 4ccc06303e Trac #26642: Errors when copying files ignored
> abc952d729 Trac #26614: turn Kruskal algo for min spanning tree into an 
> iterator
> 4b27f8df28 Trac #26611: py3: fix hypergeometric motives
> 5eacadc0b1 Trac #26579: Fix ecl.pyx doctests with threaded ecl
> 7d5d5e700e Trac #26575: Doctest results starting with ...
> 70a5645af8 Trac #26568: clean c_graph.pyx
> 0082a23a2e (tag: 8.5.beta2) Updated SageMath version to 8.5.beta2
>
>

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[sage-release] Re: Sage 8.4.beta1 released

2018-08-16 Thread fchapoton2
This failure was probably caused by the presence of a personal file 
pip.conf. Trying again now after removing this file.

Le jeudi 16 août 2018 08:28:48 UTC+2, fchap...@gmail.com a écrit :
>
> going from 8.4.b0 to 8.4.b1 fails (on my three machines) with
>
> [sagelib-8.4.beta1] && sage-python23 -u setup.py --no-user-cfg build 
> install
> [sagelib-8.4.beta1] 
> 
> [sagelib-8.4.beta1] Traceback (most recent call last):
> [sagelib-8.4.beta1]   File "setup.py", line 67, in 
> [sagelib-8.4.beta1] from module_list import ext_modules, library_order
> [sagelib-8.4.beta1]   File "/home/chapoton/sage/src/module_list.py", line 
> 114, in 
> [sagelib-8.4.beta1] from sage_setup.optional_extension import 
> OptionalExtension
> [sagelib-8.4.beta1]   File 
> "/home/chapoton/sage/src/sage_setup/optional_extension.py", line 24, in 
> 
> [sagelib-8.4.beta1] all_packages = list_packages(local=True)
> [sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
> line 225, in list_packages
> [sagelib-8.4.beta1] installed = installed_packages(exclude_pip)
> [sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
> line 285, in installed_packages
> [sagelib-8.4.beta1] installed.update(pip_installed_packages())
> [sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
> line 147, in pip_installed_packages
> [sagelib-8.4.beta1] return {package['name'].lower():package['version'] 
> for package in json.loads(stdout)}
> [sagelib-8.4.beta1]   File 
> "/home/chapoton/sage/local/lib/python2.7/json/__init__.py", line 339, in 
> loads
> [sagelib-8.4.beta1] return _default_decoder.decode(s)
> [sagelib-8.4.beta1]   File 
> "/home/chapoton/sage/local/lib/python2.7/json/decoder.py", line 364, in 
> decode
> [sagelib-8.4.beta1] obj, end = self.raw_decode(s, idx=_w(s, 0).end())
> [sagelib-8.4.beta1]   File 
> "/home/chapoton/sage/local/lib/python2.7/json/decoder.py", line 382, in 
> raw_decode
> [sagelib-8.4.beta1] raise ValueError("No JSON object could be decoded"
> )
> [sagelib-8.4.beta1] ValueError: No JSON object could be decoded
> [sagelib-8.4.beta1] 
> 
> [sagelib-8.4.beta1] Error building the Sage library
> [sagelib-8.4.beta1] 
> 
>
>
>
> see 
> https://patchbot.sagemath.org/log/0/Ubuntu/18.04/x86_64/4.15.0-30-generic/petitbonum/2018-08-15%2017:58:36?short
>
> Frédéric
>
> Le jeudi 16 août 2018 00:03:33 UTC+2, Volker Braun a écrit :
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>>
>> 23a2b10da6 (tag: 8.4.beta1) Updated SageMath version to 8.4.beta1
>> 3d7965cb6f Trac #25523: Raise Exception if DynamicalSystem initialized 
>> with coeffs not in given domain
>> 703aa6e339 Trac #25446: compute all orbits of minimal models of dynamical 
>> systems
>> 18ee14bee3 Trac #25441: Allow more substitutions for non-classical 
>> rational function field valuations
>> a4e70dddc9 Trac #25360: Honor global proof setting for "polynomial" in 
>> factorization code
>> a5c0546809 Trac #25241: fix issue with change_ring for polynomials with 
>> Maps
>> ef293c6e38 Trac #25229: Fix bug in 
>> BooleanMonomialMonoid._element_constructor_
>> 4c940be147 Trac #25226: Do not sort inductive valuations
>> 8f6c04568e Trac #23430: Cannot create a RealBall with rational radius
>> 2cffe40b73 Trac #22345: Elliptic curve isogenies over number fields II: 
>> implement Billerey's algorithm for reducible primes
>> 912e88cfbe Trac #22157: Add SPQR-tree decomposition for 
>> 2-vertex-connected graphs
>> db0b3a5a48 Trac #22156: Clarifying eps_abs and eps_rel in 
>> numerical_integral
>> a3e4977917 Trac #21946: solve(x==x, x) returns [x == r1]
>> 705d59f725 Trac #26025: Sage should not use GP_DATA_DIR
>> cf8a36f533 Trac #26020: py3: 
>> src/sage/numerical/backends/glpk_graph_backend
>> 2bd1923f8a Trac #26013: lots of warnings when uninstalling spkgs
>> cbe8c4550f Trac #25939: error in Well's algorithm for canonical height
>> 6fb4f97eb3 Trac #25749: fixing invalid escape sequences in modular (final)
>> c96ee846de Trac #25315: Find libraries in DYLD_LIBRARY_PATH as fallback
>> df9d24fd40 Trac #25276: Bugs with GradedCommutativeAlgebra
>> 2274331e6e Trac #26012: Fix bug concerning restrictions of tensorfields
>> e674750080 Trac #26008: Upgrade setuptools and pip
>> eeb4a217fb Trac #26002: Support pari compiled with threads
>> 0e78774b03 Trac #25999: Compile errors due to struct
>> f32c9bd7dc Trac #25984: Minor cleanup related to Monsky-Washnitzer
>> ce3cf8444f Trac #25975: py3: small fix for Lfunction names
>> c087f48b43 Trac #25974: py3: fix unnecessary map() in 
>> sage.calculus.riemann
>> 4273770ad2 Trac #25970: Improve "Inverse doe

[sage-release] Re: Sage 8.4.beta1 released

2018-08-15 Thread fchapoton2
going from 8.4.b0 to 8.4.b1 fails (on my three machines) with

[sagelib-8.4.beta1] && sage-python23 -u setup.py --no-user-cfg build install
[sagelib-8.4.beta1] 

[sagelib-8.4.beta1] Traceback (most recent call last):
[sagelib-8.4.beta1]   File "setup.py", line 67, in 
[sagelib-8.4.beta1] from module_list import ext_modules, library_order
[sagelib-8.4.beta1]   File "/home/chapoton/sage/src/module_list.py", line 
114, in 
[sagelib-8.4.beta1] from sage_setup.optional_extension import 
OptionalExtension
[sagelib-8.4.beta1]   File 
"/home/chapoton/sage/src/sage_setup/optional_extension.py", line 24, in 

[sagelib-8.4.beta1] all_packages = list_packages(local=True)
[sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
line 225, in list_packages
[sagelib-8.4.beta1] installed = installed_packages(exclude_pip)
[sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
line 285, in installed_packages
[sagelib-8.4.beta1] installed.update(pip_installed_packages())
[sagelib-8.4.beta1]   File "/home/chapoton/sage/src/sage/misc/package.py", 
line 147, in pip_installed_packages
[sagelib-8.4.beta1] return {package['name'].lower():package['version'] 
for package in json.loads(stdout)}
[sagelib-8.4.beta1]   File 
"/home/chapoton/sage/local/lib/python2.7/json/__init__.py", line 339, in 
loads
[sagelib-8.4.beta1] return _default_decoder.decode(s)
[sagelib-8.4.beta1]   File 
"/home/chapoton/sage/local/lib/python2.7/json/decoder.py", line 364, in 
decode
[sagelib-8.4.beta1] obj, end = self.raw_decode(s, idx=_w(s, 0).end())
[sagelib-8.4.beta1]   File 
"/home/chapoton/sage/local/lib/python2.7/json/decoder.py", line 382, in 
raw_decode
[sagelib-8.4.beta1] raise ValueError("No JSON object could be decoded")
[sagelib-8.4.beta1] ValueError: No JSON object could be decoded
[sagelib-8.4.beta1] 

[sagelib-8.4.beta1] Error building the Sage library
[sagelib-8.4.beta1] 




see 
https://patchbot.sagemath.org/log/0/Ubuntu/18.04/x86_64/4.15.0-30-generic/petitbonum/2018-08-15%2017:58:36?short

Frédéric

Le jeudi 16 août 2018 00:03:33 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> 23a2b10da6 (tag: 8.4.beta1) Updated SageMath version to 8.4.beta1
> 3d7965cb6f Trac #25523: Raise Exception if DynamicalSystem initialized 
> with coeffs not in given domain
> 703aa6e339 Trac #25446: compute all orbits of minimal models of dynamical 
> systems
> 18ee14bee3 Trac #25441: Allow more substitutions for non-classical 
> rational function field valuations
> a4e70dddc9 Trac #25360: Honor global proof setting for "polynomial" in 
> factorization code
> a5c0546809 Trac #25241: fix issue with change_ring for polynomials with 
> Maps
> ef293c6e38 Trac #25229: Fix bug in 
> BooleanMonomialMonoid._element_constructor_
> 4c940be147 Trac #25226: Do not sort inductive valuations
> 8f6c04568e Trac #23430: Cannot create a RealBall with rational radius
> 2cffe40b73 Trac #22345: Elliptic curve isogenies over number fields II: 
> implement Billerey's algorithm for reducible primes
> 912e88cfbe Trac #22157: Add SPQR-tree decomposition for 2-vertex-connected 
> graphs
> db0b3a5a48 Trac #22156: Clarifying eps_abs and eps_rel in 
> numerical_integral
> a3e4977917 Trac #21946: solve(x==x, x) returns [x == r1]
> 705d59f725 Trac #26025: Sage should not use GP_DATA_DIR
> cf8a36f533 Trac #26020: py3: src/sage/numerical/backends/glpk_graph_backend
> 2bd1923f8a Trac #26013: lots of warnings when uninstalling spkgs
> cbe8c4550f Trac #25939: error in Well's algorithm for canonical height
> 6fb4f97eb3 Trac #25749: fixing invalid escape sequences in modular (final)
> c96ee846de Trac #25315: Find libraries in DYLD_LIBRARY_PATH as fallback
> df9d24fd40 Trac #25276: Bugs with GradedCommutativeAlgebra
> 2274331e6e Trac #26012: Fix bug concerning restrictions of tensorfields
> e674750080 Trac #26008: Upgrade setuptools and pip
> eeb4a217fb Trac #26002: Support pari compiled with threads
> 0e78774b03 Trac #25999: Compile errors due to struct
> f32c9bd7dc Trac #25984: Minor cleanup related to Monsky-Washnitzer
> ce3cf8444f Trac #25975: py3: small fix for Lfunction names
> c087f48b43 Trac #25974: py3: fix unnecessary map() in sage.calculus.riemann
> 4273770ad2 Trac #25970: Improve "Inverse does not exist" error messages
> 42694c6526 Trac #25966: Upgrade Arb to 2.14.0
> 0f3a8439b3 Trac #25144: Add DESTDIR support for palp
> ed1a6bd434 Trac #25103: Minimal polynomials of elements in p-adic fields
> 2e783bb5a8 Trac #24843: Issue with p-adic printing
> dc76f7d1fd Trac #24669: Re-enable threads on OpenBLAS
> 5e6587ef2e Trac #23218: Ramified

[sage-release] Re: Release process

2018-05-11 Thread fchapoton2

>
>
> What would be nice if there were a patchbot that does pdf doc builds, 
> these tend to be broken quite often. 
>
> There is since long a plugin for that (but not activated by default). It 
seems that nobody has ever turned it on.


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[sage-release] Re: Sage 8.2.rc4 released

2018-04-26 Thread fchapoton2
Hello,

can we hope to have 8.2 released and move on to 8.3.beta soon ? I am really 
worried by the 161 positive-reviewed tickets that have been accumulating, 
and by the potential rebase work that will be triggered.

Frederic

Le vendredi 20 avril 2018 22:28:15 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> This should be the last rc, so if you want to test it now is the right 
> time!
>
> f46abe6c0e (tag: 8.2.rc4, trac/develop) Updated SageMath version to 8.2.rc4
> 88f80f584b Trac #25217: Fix test regression in banner()
> cee7c1d6d3 Trac #25196: sage -gdb abort
> 8fc1b6ad67 Trac #25177: cython() does not work in Jupyter
> b47963fb84 Trac #25078: ./sage -f sagelib no longer works
> a9d274b933 (tag: 8.2.rc3) Updated SageMath version to 8.2.rc3
>
>

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Re: [sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
This is way above my understanding of "make" matters. So help from Erik or 
Jeroen or whoever is knowledgeable in this kind of things, is required.



Le vendredi 9 février 2018 21:24:34 UTC+1, Volker Braun a écrit :
>
> Can you first set up a makefile target that is supposed to be tested? E.g. 
> "make test-python3" builds with py3 and eventually gets extended to test 
> things that already work? 
>
>
> On Friday, February 9, 2018 at 9:15:04 PM UTC+1, fchap...@gmail.com wrote:
>>
>> Volker, it would be great (and I would appreciate) if you could set up a 
>> buildbot that checks that sage builds with python3. One can not yet say 
>> that vanilla-sage builds and starts with "export SAGE_PYTHON3=yes", but at 
>> least it builds (since some time already). Starting is another matter, but 
>> maybe not so far.
>>
>> This would help to prevent any regression,as the one that just happened 
>> with subprocess32.
>>
>> Le vendredi 9 février 2018 20:15:13 UTC+1, Jeroen Demeyer a écrit :
>>>
>>> On 2018-02-09 17:55, fchap...@gmail.com wrote: 
>>> > I have a build failure in subprocess32 on a python3 build (using 
>>> export 
>>> > SAGE_PYTHON3=yes) 
>>>
>>> Fixed in https://trac.sagemath.org/ticket/24650 
>>>
>>

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Re: [sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
Volker, it would be great (and I would appreciate) if you could set up a 
buildbot that checks that sage builds with python3. One can not yet say 
that vanilla-sage builds and starts with "export SAGE_PYTHON3=yes", but at 
least it builds (since some time already). Starting is another matter, but 
maybe not so far.

This would help to prevent any regression,as the one that just happened 
with subprocess32.

Le vendredi 9 février 2018 20:15:13 UTC+1, Jeroen Demeyer a écrit :
>
> On 2018-02-09 17:55, fchap...@gmail.com  wrote: 
> > I have a build failure in subprocess32 on a python3 build (using export 
> > SAGE_PYTHON3=yes) 
>
> Fixed in https://trac.sagemath.org/ticket/24650 
>

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[sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
I have a build failure in subprocess32 on a python3 build (using export 
SAGE_PYTHON3=yes)


[subprocess32-3.2.7] Found local metadata for subprocess32-3.2.7
[subprocess32-3.2.7] Attempting to download package 
subprocess32-3.2.7.tar.gz from mirrors
[subprocess32-3.2.7] 
http://www.mirrorservice.org/sites/www.sagemath.org/spkg/upstream/subprocess32/subprocess32-3.2.7.tar.gz
[subprocess32-3.2.7] 
[..]
[subprocess32-3.2.7] subprocess32-3.2.7
[subprocess32-3.2.7] 
[subprocess32-3.2.7] Setting up build directory for subprocess32-3.2.7
[subprocess32-3.2.7] Finished extraction
[subprocess32-3.2.7] No patch files found in ../patches
[subprocess32-3.2.7] 
[subprocess32-3.2.7] Host system:
[subprocess32-3.2.7] Linux pc-chapoton 4.13.0-32-generic #35-Ubuntu SMP Thu 
Jan 25 09:13:46 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
[subprocess32-3.2.7] 
[subprocess32-3.2.7] C compiler: gcc
[subprocess32-3.2.7] C compiler version:
[subprocess32-3.2.7] Using built-in specs.
[subprocess32-3.2.7] COLLECT_GCC=gcc
[subprocess32-3.2.7] 
COLLECT_LTO_WRAPPER=/home/chapoton/sage3/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
[subprocess32-3.2.7] Target: x86_64-pc-linux-gnu
[subprocess32-3.2.7] Configured with: ../src/configure 
--prefix=/home/chapoton/sage3/local 
--with-local-prefix=/home/chapoton/sage3/local 
--with-gmp=/home/chapoton/sage3/local 
--with-mpfr=/home/chapoton/sage3/local 
--with-mpc=/home/chapoton/sage3/local --with-system-zlib --disable-multilib 
--disable-nls --enable-languages=c,c++,fortran --disable-libitm  
[subprocess32-3.2.7] Thread model: posix
[subprocess32-3.2.7] gcc version 7.2.0 (GCC) 
[subprocess32-3.2.7] 
[subprocess32-3.2.7] Installing subprocess32-3.2.7
[subprocess32-3.2.7] This backport is for Python 2.x only.
[subprocess32-3.2.7] Error: could not determine package name
[subprocess32-3.2.7] 

[subprocess32-3.2.7] Error installing subprocess32-3.2.7
[subprocess32-3.2.7] 

[subprocess32-3.2.7] 
[subprocess32-3.2.7] real 0m0.131s
[subprocess32-3.2.7] user 0m0.056s
[subprocess32-3.2.7] sys 0m0.001s
[subprocess32-3.2.7] 

[subprocess32-3.2.7] Error installing package subprocess32-3.2.7
[subprocess32-3.2.7] 

[subprocess32-3.2.7] Please email sage-devel 
(http://groups.google.com/group/sage-devel)
[subprocess32-3.2.7] explaining the problem and including the log file
[subprocess32-3.2.7]   /home/chapoton/sage3/logs/pkgs/subprocess32-3.2.7.log
[subprocess32-3.2.7] Describe your computer, operating system, etc.
[subprocess32-3.2.7] If you want to try to fix the problem yourself, 
*don't* just cd to
[subprocess32-3.2.7] 
/home/chapoton/sage3/local/var/tmp/sage/build/subprocess32-3.2.7 and type 
'make' or whatever is appropriate.
[subprocess32-3.2.7] Instead, the following commands setup all environment 
variables
[subprocess32-3.2.7] correctly and load a subshell for you to debug the 
error:
[subprocess32-3.2.7]   (cd 
'/home/chapoton/sage3/local/var/tmp/sage/build/subprocess32-3.2.7' && 
'/home/chapoton/sage3/sage' --sh)
[subprocess32-3.2.7] When you are done debugging, you can type "exit" to 
leave the subshell.
[subprocess32-3.2.7] 

Makefile:2950 : la recette pour la cible « 
/home/chapoton/sage3/local/var/lib/sage/installed/subprocess32-3.2.7 » a 
échouée
make[2]: *** 
[/home/chapoton/sage3/local/var/lib/sage/installed/subprocess32-3.2.7] 
Erreur 1



Le vendredi 9 février 2018 09:25:28 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> e6cae6d88d (tag: 8.2.beta5, trac/develop) Updated SageMath version to 
> 8.2.beta5
> 9dd4282d36 Trac #24660: Memory leak in SubgraphSearch
> b9aa268ecd Trac #24639: Enumerating greedy linear extensions
> c795e950c9 Trac #24636: Rivin's test for circumcribability and 
> inscribability
> d70b6a253a Trac #24629: fix R build on Solaris 11
> 4f53f24d1f Trac #24628: Build PCRE without JIT if needed
> 867f4c9761 Trac #24618: fplll fails to build on SunOS
> 92ac632d04 Trac #24611: Singular fails to build on SunOS
> ac14d82c6f Trac #24590: bug in inverse_image of module homomorphism
> 38e8a65eec Trac #24313: py3: fixes to sage.misc.temporary_file
> b899601826 Trac #24239: Implement soliton cellular automata
> 7d0ca44142 Trac #24139: Allow baseline to be given as part

Re: [sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
I sent something at your lri adress.

Le vendredi 9 février 2018 13:52:24 UTC+1, Jeroen Demeyer a écrit :
>
> On 2018-02-09 11:56, fchap...@gmail.com  wrote: 
> > An incremental build from previous beta fails on gfortran : 
>
> Please do 
>
> touch configure.ac && make build 
>
> and send me the full output. 
>

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Re: [sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
I did a make distclean and make. Everything built smoothly.

Le vendredi 9 février 2018 12:10:40 UTC+1, François Bissey a écrit :
>
> Actually if you have the autotools packages installed (from the system or 
> sage) 
> can you try 
> autoreconf -i 
> then re-run configure and see if that fix it. 
>
> > On 10/02/2018, at 00:02, François Bissey  > wrote: 
> > 
> > Which version of ubuntu? We have seen an instance of that problem during 
> review 
> > but we thought it was fixed. OK, there was something nagging me but it 
> looked 
> > fixed on the patchbot. 
> > 
> >> On 9/02/2018, at 23:56, fchap...@gmail.com  wrote: 
> >> 
> >> An incremental build from previous beta fails on gfortran : 
> >> 
> >> [gfortran-7.2.0] Found local metadata for gfortran-7.2.0 
> >> [gfortran-7.2.0] Using cached file 
> /home/chapoton/sage/upstream/gcc-7.2.0.tar.xz 
> >> [gfortran-7.2.0] gfortran-7.2.0 
> >> [gfortran-7.2.0]  
> >> [gfortran-7.2.0] Setting up build directory for gfortran-7.2.0 
> >> [gfortran-7.2.0] Finished extraction 
> >> [gfortran-7.2.0] No patch files found in ../patches 
> >> [gfortran-7.2.0]  
> >> [gfortran-7.2.0] Host system: 
> >> [gfortran-7.2.0] Linux pc-chapoton 4.13.0-32-generic #35-Ubuntu SMP Thu 
> Jan 25 09:13:46 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux 
> >> [gfortran-7.2.0]  
> >> [gfortran-7.2.0] C compiler: gcc 
> >> [gfortran-7.2.0] C compiler version: 
> >> [gfortran-7.2.0] Using built-in specs. 
> >> [gfortran-7.2.0] COLLECT_GCC=gcc 
> >> [gfortran-7.2.0] 
> COLLECT_LTO_WRAPPER=/home/chapoton/sage/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
>  
>
> >> [gfortran-7.2.0] Target: x86_64-pc-linux-gnu 
> >> [gfortran-7.2.0] Configured with: ../src/configure 
> --prefix=/home/chapoton/sage/local 
> --with-local-prefix=/home/chapoton/sage/local 
> --with-gmp=/home/chapoton/sage/local --with-mpfr=/home/chapoton/sage/local 
> --with-mpc=/home/chapoton/sage/local --with-system-zlib --disable-multilib 
> --disable-nls --enable-languages=c,c++,fortran --disable-libitm   
> >> [gfortran-7.2.0] Thread model: posix 
> >> [gfortran-7.2.0] gcc version 7.2.0 (GCC) 
> >> [gfortran-7.2.0]  
> >> [gfortran-7.2.0] Error: gcc is already installed 
> >> [gfortran-7.2.0] 
> >> [gfortran-7.2.0] real0m0.003s 
> >> [gfortran-7.2.0] user0m0.004s 
> >> [gfortran-7.2.0] sys0m0.000s 
> >> [gfortran-7.2.0] 
>  
> >> [gfortran-7.2.0] Error installing package gfortran-7.2.0 
> >> [gfortran-7.2.0] 
>  
> >> 
> >> 
> >> Le vendredi 9 février 2018 09:25:28 UTC+1, Volker Braun a écrit : 
> >> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
> >> 
> >> e6cae6d88d (tag: 8.2.beta5, trac/develop) Updated SageMath version to 
> 8.2.beta5 
> >> 9dd4282d36 Trac #24660: Memory leak in SubgraphSearch 
> >> b9aa268ecd Trac #24639: Enumerating greedy linear extensions 
> >> c795e950c9 Trac #24636: Rivin's test for circumcribability and 
> inscribability 
> >> d70b6a253a Trac #24629: fix R build on Solaris 11 
> >> 4f53f24d1f Trac #24628: Build PCRE without JIT if needed 
> >> 867f4c9761 Trac #24618: fplll fails to build on SunOS 
> >> 92ac632d04 Trac #24611: Singular fails to build on SunOS 
> >> ac14d82c6f Trac #24590: bug in inverse_image of module homomorphism 
> >> 38e8a65eec Trac #24313: py3: fixes to sage.misc.temporary_file 
> >> b899601826 Trac #24239: Implement soliton cellular automata 
> >> 7d0ca44142 Trac #24139: Allow baseline to be given as part of ascii_art 
> and unicode_art 
> >> 94da5b67c1 Trac #24656: Fix bug in type E bijection from cythonizing 
> RiggedPartition 
> >> e8c626f7da Trac #24615: interface libgap floats 
> >> 9c146ffcb2 Trac #24608: Remove deprecated PowerSeries._floordiv_ 
> >> 6b689d3bfa Trac #23978: Rich comparison for Modules 
> >> 70c254125d Trac #24634: add .is_polyhedral method to graphs 
> >> 2d1615636e Trac #24175: Optimizations to generating rigged 
> configurations 
> >> 7be8a667e9 Trac #24141: Optimizations to Kleber tree 
> >> 8a2e3ed425 Trac #24035: Normal forms for TorsionQuadraticModules 
> >> 9b223d74de Trac #24633: Add jump count for a linear extension 
> >> 0da6392254 Trac #24632: Add is_greedy() to linear extension. 
> >> e185837226 Trac #24631: Faster jump number for posets 
> >> 4387613c32 Trac #24619: giac fails to build on SunOS 
> >> 58fdd676a4 Trac #24516: Cygwin test failures in lseries_ell 
> >> ab3c1c8da7 Trac #24411: Move gamma functions into their own file 
> >> 79f648c706 Trac #23714: GAP matrices 
> >> 295b129a35 Trac #22921: Implementation of shifted tableaux

Re: [sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
ubuntu 17.10. There is also at least one patchbot having the same issue, see

https://patchbot.sagemath.org/ticket/0/

Le vendredi 9 février 2018 12:02:28 UTC+1, François Bissey a écrit :
>
> Which version of ubuntu? We have seen an instance of that problem during 
> review 
> but we thought it was fixed. OK, there was something nagging me but it 
> looked 
> fixed on the patchbot. 
>
> > On 9/02/2018, at 23:56, fchap...@gmail.com  wrote: 
> > 
> > An incremental build from previous beta fails on gfortran : 
> > 
> > [gfortran-7.2.0] Found local metadata for gfortran-7.2.0 
> > [gfortran-7.2.0] Using cached file 
> /home/chapoton/sage/upstream/gcc-7.2.0.tar.xz 
> > [gfortran-7.2.0] gfortran-7.2.0 
> > [gfortran-7.2.0]  
> > [gfortran-7.2.0] Setting up build directory for gfortran-7.2.0 
> > [gfortran-7.2.0] Finished extraction 
> > [gfortran-7.2.0] No patch files found in ../patches 
> > [gfortran-7.2.0]  
> > [gfortran-7.2.0] Host system: 
> > [gfortran-7.2.0] Linux pc-chapoton 4.13.0-32-generic #35-Ubuntu SMP Thu 
> Jan 25 09:13:46 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux 
> > [gfortran-7.2.0]  
> > [gfortran-7.2.0] C compiler: gcc 
> > [gfortran-7.2.0] C compiler version: 
> > [gfortran-7.2.0] Using built-in specs. 
> > [gfortran-7.2.0] COLLECT_GCC=gcc 
> > [gfortran-7.2.0] 
> COLLECT_LTO_WRAPPER=/home/chapoton/sage/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
>  
>
> > [gfortran-7.2.0] Target: x86_64-pc-linux-gnu 
> > [gfortran-7.2.0] Configured with: ../src/configure 
> --prefix=/home/chapoton/sage/local 
> --with-local-prefix=/home/chapoton/sage/local 
> --with-gmp=/home/chapoton/sage/local --with-mpfr=/home/chapoton/sage/local 
> --with-mpc=/home/chapoton/sage/local --with-system-zlib --disable-multilib 
> --disable-nls --enable-languages=c,c++,fortran --disable-libitm   
> > [gfortran-7.2.0] Thread model: posix 
> > [gfortran-7.2.0] gcc version 7.2.0 (GCC) 
> > [gfortran-7.2.0]  
> > [gfortran-7.2.0] Error: gcc is already installed 
> > [gfortran-7.2.0] 
> > [gfortran-7.2.0] real0m0.003s 
> > [gfortran-7.2.0] user0m0.004s 
> > [gfortran-7.2.0] sys0m0.000s 
> > [gfortran-7.2.0] 
>  
> > [gfortran-7.2.0] Error installing package gfortran-7.2.0 
> > [gfortran-7.2.0] 
>  
> > 
> > 
> > Le vendredi 9 février 2018 09:25:28 UTC+1, Volker Braun a écrit : 
> > As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
> > 
> > e6cae6d88d (tag: 8.2.beta5, trac/develop) Updated SageMath version to 
> 8.2.beta5 
> > 9dd4282d36 Trac #24660: Memory leak in SubgraphSearch 
> > b9aa268ecd Trac #24639: Enumerating greedy linear extensions 
> > c795e950c9 Trac #24636: Rivin's test for circumcribability and 
> inscribability 
> > d70b6a253a Trac #24629: fix R build on Solaris 11 
> > 4f53f24d1f Trac #24628: Build PCRE without JIT if needed 
> > 867f4c9761 Trac #24618: fplll fails to build on SunOS 
> > 92ac632d04 Trac #24611: Singular fails to build on SunOS 
> > ac14d82c6f Trac #24590: bug in inverse_image of module homomorphism 
> > 38e8a65eec Trac #24313: py3: fixes to sage.misc.temporary_file 
> > b899601826 Trac #24239: Implement soliton cellular automata 
> > 7d0ca44142 Trac #24139: Allow baseline to be given as part of ascii_art 
> and unicode_art 
> > 94da5b67c1 Trac #24656: Fix bug in type E bijection from cythonizing 
> RiggedPartition 
> > e8c626f7da Trac #24615: interface libgap floats 
> > 9c146ffcb2 Trac #24608: Remove deprecated PowerSeries._floordiv_ 
> > 6b689d3bfa Trac #23978: Rich comparison for Modules 
> > 70c254125d Trac #24634: add .is_polyhedral method to graphs 
> > 2d1615636e Trac #24175: Optimizations to generating rigged 
> configurations 
> > 7be8a667e9 Trac #24141: Optimizations to Kleber tree 
> > 8a2e3ed425 Trac #24035: Normal forms for TorsionQuadraticModules 
> > 9b223d74de Trac #24633: Add jump count for a linear extension 
> > 0da6392254 Trac #24632: Add is_greedy() to linear extension. 
> > e185837226 Trac #24631: Faster jump number for posets 
> > 4387613c32 Trac #24619: giac fails to build on SunOS 
> > 58fdd676a4 Trac #24516: Cygwin test failures in lseries_ell 
> > ab3c1c8da7 Trac #24411: Move gamma functions into their own file 
> > 79f648c706 Trac #23714: GAP matrices 
> > 295b129a35 Trac #22921: Implementation of shifted tableaux 
> > c5248314f7 Trac #24625: Some small improvements to 
> polynomial_complex_arb 
> > d842b25062 Trac #24624: Stop using new_t_POL_from_int_star from cypari2 
> > 75e3f2960a Trac #24617: Infinite process recursion with Solaris make 
> > bb2b7304

[sage-release] Re: Sage 8.2.beta5 released

2018-02-09 Thread fchapoton2
An incremental build from previous beta fails on gfortran :

[gfortran-7.2.0] Found local metadata for gfortran-7.2.0
[gfortran-7.2.0] Using cached file 
/home/chapoton/sage/upstream/gcc-7.2.0.tar.xz
[gfortran-7.2.0] gfortran-7.2.0
[gfortran-7.2.0] 
[gfortran-7.2.0] Setting up build directory for gfortran-7.2.0
[gfortran-7.2.0] Finished extraction
[gfortran-7.2.0] No patch files found in ../patches
[gfortran-7.2.0] 
[gfortran-7.2.0] Host system:
[gfortran-7.2.0] Linux pc-chapoton 4.13.0-32-generic #35-Ubuntu SMP Thu Jan 
25 09:13:46 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
[gfortran-7.2.0] 
[gfortran-7.2.0] C compiler: gcc
[gfortran-7.2.0] C compiler version:
[gfortran-7.2.0] Using built-in specs.
[gfortran-7.2.0] COLLECT_GCC=gcc
[gfortran-7.2.0] 
COLLECT_LTO_WRAPPER=/home/chapoton/sage/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
[gfortran-7.2.0] Target: x86_64-pc-linux-gnu
[gfortran-7.2.0] Configured with: ../src/configure 
--prefix=/home/chapoton/sage/local 
--with-local-prefix=/home/chapoton/sage/local 
--with-gmp=/home/chapoton/sage/local --with-mpfr=/home/chapoton/sage/local 
--with-mpc=/home/chapoton/sage/local --with-system-zlib --disable-multilib 
--disable-nls --enable-languages=c,c++,fortran --disable-libitm  
[gfortran-7.2.0] Thread model: posix
[gfortran-7.2.0] gcc version 7.2.0 (GCC) 
[gfortran-7.2.0] 
[gfortran-7.2.0] Error: gcc is already installed
[gfortran-7.2.0] 
[gfortran-7.2.0] real 0m0.003s
[gfortran-7.2.0] user 0m0.004s
[gfortran-7.2.0] sys 0m0.000s
[gfortran-7.2.0] 

[gfortran-7.2.0] Error installing package gfortran-7.2.0
[gfortran-7.2.0] 



Le vendredi 9 février 2018 09:25:28 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> e6cae6d88d (tag: 8.2.beta5, trac/develop) Updated SageMath version to 
> 8.2.beta5
> 9dd4282d36 Trac #24660: Memory leak in SubgraphSearch
> b9aa268ecd Trac #24639: Enumerating greedy linear extensions
> c795e950c9 Trac #24636: Rivin's test for circumcribability and 
> inscribability
> d70b6a253a Trac #24629: fix R build on Solaris 11
> 4f53f24d1f Trac #24628: Build PCRE without JIT if needed
> 867f4c9761 Trac #24618: fplll fails to build on SunOS
> 92ac632d04 Trac #24611: Singular fails to build on SunOS
> ac14d82c6f Trac #24590: bug in inverse_image of module homomorphism
> 38e8a65eec Trac #24313: py3: fixes to sage.misc.temporary_file
> b899601826 Trac #24239: Implement soliton cellular automata
> 7d0ca44142 Trac #24139: Allow baseline to be given as part of ascii_art 
> and unicode_art
> 94da5b67c1 Trac #24656: Fix bug in type E bijection from cythonizing 
> RiggedPartition
> e8c626f7da Trac #24615: interface libgap floats
> 9c146ffcb2 Trac #24608: Remove deprecated PowerSeries._floordiv_
> 6b689d3bfa Trac #23978: Rich comparison for Modules
> 70c254125d Trac #24634: add .is_polyhedral method to graphs
> 2d1615636e Trac #24175: Optimizations to generating rigged configurations
> 7be8a667e9 Trac #24141: Optimizations to Kleber tree
> 8a2e3ed425 Trac #24035: Normal forms for TorsionQuadraticModules
> 9b223d74de Trac #24633: Add jump count for a linear extension
> 0da6392254 Trac #24632: Add is_greedy() to linear extension.
> e185837226 Trac #24631: Faster jump number for posets
> 4387613c32 Trac #24619: giac fails to build on SunOS
> 58fdd676a4 Trac #24516: Cygwin test failures in lseries_ell
> ab3c1c8da7 Trac #24411: Move gamma functions into their own file
> 79f648c706 Trac #23714: GAP matrices
> 295b129a35 Trac #22921: Implementation of shifted tableaux
> c5248314f7 Trac #24625: Some small improvements to polynomial_complex_arb
> d842b25062 Trac #24624: Stop using new_t_POL_from_int_star from cypari2
> 75e3f2960a Trac #24617: Infinite process recursion with Solaris make
> bb2b730403 Trac #24614: Deprecate args of Parent_old.__init__
> 505af6e57c Trac #24613: Remove actions from old coercion model
> b200dbae27 Trac #24610: Change richcmp() to a cpdef inline function
> 2a71f44dae Trac #24607: Add abstract _add_ and _mul_ methods to RingElement
> 6296a31f22 Trac #24606: Forgotten check_error in maxima spkg-install
> f5259142ff Trac #24602: upgrade iconv to 1.15
> e7fe097bf3 Trac #24597: Properly set LD_LIBRARY_PATH in spkg-build for 
> python2/3 on SunOS
> 69951df4c2 Trac #24584: Add the power poset
> 8e3fde343d Trac #24431: Fix coercions and pushout for Laurent series
> f313460743 Trac #24381: New Parent method _convert_method_map
> 9f2efaef78 Trac #24357: Two bugs in NumberField.composite_fields()
> 56c322343a Trac #24223: py3: sev

[sage-release] Re: Sage 8.1 released

2017-12-11 Thread fchapoton2
Volker, could you please get rid of the 66 "positive-reviewed as invalid" 
tickets ?

Frédéric

https://trac.sagemath.org/query?status=positive_review&milestone=sage-duplicate%2Finvalid%2Fwontfix&max=0&col=id&col=summary&col=owner&col=type&col=priority&col=milestone&col=component&order=id

Le vendredi 8 décembre 2017 01:06:15 UTC+1, Volker Braun a écrit :
>
> The "master" git branch has been updated to Sage-8.1. As always, you can 
> get the latest beta version from the "develop" git branch. Alternatively, 
> the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> There was no change over 8.1rc4
>
>

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Re: [sage-release] Re: Sage 8.1.beta3 released

2017-08-26 Thread fchapoton2
The long-time doctests in function fields should be fixed by the ticket

https://trac.sagemath.org/ticket/23683

Hopefully it will be merged soon.

Le vendredi 25 août 2017 17:23:55 UTC+2, Erik Bray a écrit :
>
> On Wed, Aug 23, 2017 at 10:44 AM, Emmanuel Charpentier 
> > wrote: 
> > On Debian testing running on Core i7 + 16 GB RAM (MAKE="make -j8"), 
> passes 
> > ptestlong with one failure : 
> > 
> > -- 
> > sage -t --long src/sage/rings/function_field/function_field.py  # Timed 
> out 
> > -- 
> > 
> > which passes with no failure (but needs 669.8 seconds (!))  when ran 
> > standalone. 
> > 
> > For comparison, the same test , called by "make ptestlong" on a slightly 
> > smaller macine (Debian on Core i3 + 8 GB RAM, MAKE="make -j4") took 
> 817.25 
> > seconds (and did not reach the timeout limit...). 
> > 
> > Hypothesis : ptestlong's computation of the timeout limit is more 
> > conservative on the "smaller" machine. 
>
> I'm also having problems with this test in my attempt to build a 
> docker image for 8.1.beta3.  It is failing consistently with a 
> timeout.  I also get a long C stack trace at: 
>
> sage: TestSuite(N).run(skip = '_test_derivation')  # long time ## line 70 
> ## 
>  
> /opt/sage/local/lib/python2.7/site-packages/cysignals/signals.so(+0x5ca8)[0x7f837bfbcca8]
>  
>
> /opt/sage/local/lib/python2.7/site-packages/cysignals/signals.so(+0x5d15)[0x7f837bfbcd15]
>  
>
> /opt/sage/local/lib/python2.7/site-packages/cysignals/signals.so(+0x8e07)[0x7f837bfbfe07]
>  
>
> /lib/x86_64-linux-gnu/libpthread.so.0(+0x10d10)[0x7f8380d56d10] 
> /opt/sage/local/lib/libpython2.7.so.1.0(PyDict_GetItem+0x1c)[0x7f838100160c] 
>
> /opt/sage/local/lib/libpython2.7.so.1.0(_PyType_Lookup+0x5f)[0x7f838102863f] 
>
> /opt/sage/local/lib/libpython2.7.so.1.0(_PyObject_GenericGetAttrWithDict+0x75)[0x7f8381007975]
>  
>
> /opt/sage/local/lib/python2.7/site-packages/sage/structure/category_object.so(+0x620f)[0x7f837496620f]
>  
>
> /opt/sage/local/lib/python2.7/site-packages/sage/rings/polynomial/polynomial_zz_pex.so(+0x2c584)[0x7f8142e31584]
>  
>
> ... 
>
> where I guess the signal that's being handled is a SIGALRM. 
>
> I can post the full stack trace if anyone thinks it will be useful but 
> it seems like we already have an idea what's wrong here... 
>
>
>
> > Le mardi 22 août 2017 00:23:40 UTC+2, Volker Braun a écrit : 
> >> 
> >> As always, you can get the latest beta version from the "develop" git 
> >> branch. Alternatively, the self-contained source tarball is at 
> >> http://www.sagemath.org/download-latest.html 
> >> 
> >> 037272ccba (tag: 8.1.beta3) Updated SageMath version to 8.1.beta3 
> >> e5005bdf80 Trac #23622: LatticePoset doc, use the master bib file 
> >> e87f9b5ac6 Trac #19339: Use digraph labels if present for 
> ClusterAlgebra 
> >> and ClusterQuiver 
> >> c8a96622b7 Trac #23654: Bug in ClusterAlgebra _coerce_map_from_ 
> >> 8808ca4011 Trac #23651: py3 more cmp for polynomial ring elements 
> >> 03bad70bdc Trac #23649: py3 richcmp for Gamma congruence groups 
> >> 3b249bf9dc Trac #23641: py3: another load of absolute imports in cython 
> >> files 
> >> 8c4222beb7 Trac #23636: arccoth(float) returns complex 
> >> 6c8bd5d748 Trac #23633: infinite polynomial: iterate over 
> >> coefficient/monomial 
> >> 7f7f583875 Trac #23608: Riemann surfaces: homomorphisms, interfacing, 
> sums 
> >> aff66a3b37 Trac #23583: py3: some more richcmp in schemes, rings, and 
> >> combinat 
> >> efaeac41d1 Trac #20932: Issues with p1list in modular symbols 
> >> af8f63c5b1 Trac #23624: 0 should not be a primitive root 
> >> e55b6ea474 Trac #23378: GradedCommutativeAlgebra constructor passes 
> names 
> >> as NCPolynomial_plural 
> >> 5af5f731a4 Trac #23472: The error message for splitting_field when name 
> is 
> >> None does not match that of NumberField 
> >> 689096eed8 Trac #23620: gcd has wrong parent 
> >> 8e2e4876b2 Trac #23609: Don't use wrong Cremona labels in 
> elliptic_curves 
> >> database 
> >> 3cbfcdae00 Trac #23160: Add a library of common helper functions for 
> use 
> >> in spkg-install 
> >> ae0118fcc7 Trac #7304: Contract edge in graph 
> >> f70241fb6c Trac #23617: Zq's default type  in the documentation didn't 
> >> agree with the code 
> >> d2f8470c67 Trac #23616: fmpz_mat_to_mpz_array ignores exceptions 
> >> 41836402a7 Trac #23605: Heisenberg group 
> >> 39f21c47d9 Trac #23379: LatticePoset: add adjunct() 
> >> effcedba41 (tag: 8.1.beta2) Updated SageMath version to 8.1.beta2 
> >> 
> > -- 
> > You received this message because you are subscribed to the Google 
> Groups 
> > "sage-release" group. 
> > To unsubscribe from this group and stop receiving emails from it, send 
> an 
> > email to sage-release...@googlegroups.com . 
> > To post to this group, send email to sage-r...@googlegrou

[sage-release] Re: Sage 8.1.beta3 released

2017-08-23 Thread fchapoton2
This is probably due to the changes in 
https://trac.sagemath.org/ticket/23193

Le mercredi 23 août 2017 11:55:50 UTC+2, fchap...@gmail.com a écrit :
>
> function_field doctests are way too long !
>
>
> sage -t --long --warn-long src/sage/rings/function_field/function_field.py
> **
> File "src/sage/rings/function_field/function_field.py", line 67, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(K).run()
> Test ran for 7.59 s
> **
> File "src/sage/rings/function_field/function_field.py", line 68, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(L).run()  # long time (8s on sage.math, 2012)
> Test ran for 160.36 s
> **
> File "src/sage/rings/function_field/function_field.py", line 69, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(M).run()  # long time (52s on sage.math, 2012)
> Test ran for 328.39 s
> **
> File "src/sage/rings/function_field/function_field.py", line 70, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(N).run(skip = '_test_derivation')  # long time
> Test ran for 73.26 s
> **
> File "src/sage/rings/function_field/function_field.py", line 71, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(O).run(skip = '_test_derivation')  # long time
> Test ran for 44.69 s
> **
> File "src/sage/rings/function_field/function_field.py", line 74, in sage.
> rings.function_field.function_field
> Warning, slow doctest:
> TestSuite(S).run()
> Test ran for 1.88 s
> **
> File "src/sage/rings/function_field/function_field.py", line 460, in sage.
> rings.function_field.function_field.FunctionField._test_derivation
> Warning, slow doctest:
> TestSuite(K).run() # indirect doctest
> Test ran for 1.63 s
> [458 tests, 621.69 s]
> --
> All tests passed!
> --
> Total time for all tests: 621.8 seconds
> cpu time: 620.1 seconds
> cumulative wall time: 621.7 seconds
>
>
>
>
> Le mercredi 23 août 2017 10:44:45 UTC+2, Emmanuel Charpentier a écrit :
>>
>> On Debian testing running on Core i7 + 16 GB RAM (MAKE="make -j8"), 
>> passes ptestlong with one failure : 
>>
>> --
>> sage -t --long src/sage/rings/function_field/function_field.py  # Timed 
>> out
>> --
>>
>> which passes with no failure (but needs 669.8 seconds (!))  when ran 
>> standalone.
>>
>> For comparison, the same test , called by "make ptestlong" on a slightly 
>> smaller macine (Debian on Core i3 + 8 GB RAM, MAKE="make -j4") took 817.25 
>> seconds (and did not reach the timeout limit...).
>>
>> Hypothesis : ptestlong's computation of the timeout limit is more 
>> conservative on the "smaller" machine.
>>
>> HTH,
>>
>> --
>> Emmanuel Charpentier
>>
>>
>> Le mardi 22 août 2017 00:23:40 UTC+2, Volker Braun a écrit :
>>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html
>>>
>>> 037272ccba (tag: 8.1.beta3) Updated SageMath version to 8.1.beta3
>>> e5005bdf80 Trac #23622: LatticePoset doc, use the master bib file
>>> e87f9b5ac6 Trac #19339: Use digraph labels if present for ClusterAlgebra 
>>> and ClusterQuiver
>>> c8a96622b7 Trac #23654: Bug in ClusterAlgebra _coerce_map_from_
>>> 8808ca4011 Trac #23651: py3 more cmp for polynomial ring elements
>>> 03bad70bdc Trac #23649: py3 richcmp for Gamma congruence groups
>>> 3b249bf9dc Trac #23641: py3: another load of absolute imports in cython 
>>> files
>>> 8c4222beb7 Trac #23636: arccoth(float) returns complex
>>> 6c8bd5d748 Trac #23633: infinite polynomial: iterate over 
>>> coefficient/monomial
>>> 7f7f583875 Trac #23608: Riemann surfaces: homomorphisms, interfacing, 
>>> sums
>>> aff66a3b37 Trac #23583: py3: some more richcmp in schemes, rings, and 
>>> combinat
>>> efaeac41d1 Trac #20932: Issues with p1list in modular symbols
>>> af8f63c5b1 Trac #23624: 0 should not be a primitive root
>>> e55b6ea474 Trac #23378: GradedCommutativeAlgebra constructor passes 
>>> names as NCPolynomial_plural
>>> 5af5f731a4 Trac #23472: The error message for splitting_field when name 
>>> is None does not match that of NumberField
>>> 689096eed8 Trac 

[sage-release] Re: Sage 8.1.beta3 released

2017-08-23 Thread fchapoton2
function_field doctests are way too long !


sage -t --long --warn-long src/sage/rings/function_field/function_field.py
**
File "src/sage/rings/function_field/function_field.py", line 67, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(K).run()
Test ran for 7.59 s
**
File "src/sage/rings/function_field/function_field.py", line 68, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(L).run()  # long time (8s on sage.math, 2012)
Test ran for 160.36 s
**
File "src/sage/rings/function_field/function_field.py", line 69, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(M).run()  # long time (52s on sage.math, 2012)
Test ran for 328.39 s
**
File "src/sage/rings/function_field/function_field.py", line 70, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(N).run(skip = '_test_derivation')  # long time
Test ran for 73.26 s
**
File "src/sage/rings/function_field/function_field.py", line 71, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(O).run(skip = '_test_derivation')  # long time
Test ran for 44.69 s
**
File "src/sage/rings/function_field/function_field.py", line 74, in sage.
rings.function_field.function_field
Warning, slow doctest:
TestSuite(S).run()
Test ran for 1.88 s
**
File "src/sage/rings/function_field/function_field.py", line 460, in sage.
rings.function_field.function_field.FunctionField._test_derivation
Warning, slow doctest:
TestSuite(K).run() # indirect doctest
Test ran for 1.63 s
[458 tests, 621.69 s]
--
All tests passed!
--
Total time for all tests: 621.8 seconds
cpu time: 620.1 seconds
cumulative wall time: 621.7 seconds




Le mercredi 23 août 2017 10:44:45 UTC+2, Emmanuel Charpentier a écrit :
>
> On Debian testing running on Core i7 + 16 GB RAM (MAKE="make -j8"), passes 
> ptestlong with one failure : 
>
> --
> sage -t --long src/sage/rings/function_field/function_field.py  # Timed out
> --
>
> which passes with no failure (but needs 669.8 seconds (!))  when ran 
> standalone.
>
> For comparison, the same test , called by "make ptestlong" on a slightly 
> smaller macine (Debian on Core i3 + 8 GB RAM, MAKE="make -j4") took 817.25 
> seconds (and did not reach the timeout limit...).
>
> Hypothesis : ptestlong's computation of the timeout limit is more 
> conservative on the "smaller" machine.
>
> HTH,
>
> --
> Emmanuel Charpentier
>
>
> Le mardi 22 août 2017 00:23:40 UTC+2, Volker Braun a écrit :
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>> 037272ccba (tag: 8.1.beta3) Updated SageMath version to 8.1.beta3
>> e5005bdf80 Trac #23622: LatticePoset doc, use the master bib file
>> e87f9b5ac6 Trac #19339: Use digraph labels if present for ClusterAlgebra 
>> and ClusterQuiver
>> c8a96622b7 Trac #23654: Bug in ClusterAlgebra _coerce_map_from_
>> 8808ca4011 Trac #23651: py3 more cmp for polynomial ring elements
>> 03bad70bdc Trac #23649: py3 richcmp for Gamma congruence groups
>> 3b249bf9dc Trac #23641: py3: another load of absolute imports in cython 
>> files
>> 8c4222beb7 Trac #23636: arccoth(float) returns complex
>> 6c8bd5d748 Trac #23633: infinite polynomial: iterate over 
>> coefficient/monomial
>> 7f7f583875 Trac #23608: Riemann surfaces: homomorphisms, interfacing, sums
>> aff66a3b37 Trac #23583: py3: some more richcmp in schemes, rings, and 
>> combinat
>> efaeac41d1 Trac #20932: Issues with p1list in modular symbols
>> af8f63c5b1 Trac #23624: 0 should not be a primitive root
>> e55b6ea474 Trac #23378: GradedCommutativeAlgebra constructor passes names 
>> as NCPolynomial_plural
>> 5af5f731a4 Trac #23472: The error message for splitting_field when name 
>> is None does not match that of NumberField
>> 689096eed8 Trac #23620: gcd has wrong parent
>> 8e2e4876b2 Trac #23609: Don't use wrong Cremona labels in elliptic_curves 
>> database
>> 3cbfcdae00 Trac #23160: Add a library of common helper functions for use 
>> in spkg-install
>> ae0118fcc7 Trac #7304: Contract edge in graph
>> f70241fb6c Trac #23617: Zq's default type  in the docume

[sage-release] Re: Sage 8.1.beta0 released

2017-07-30 Thread fchapoton2
Thanks for all your work, Volker.

Several patchbots report failures in "sage -t --long 
src/sage/rings/fraction_field_FpT.pyx  # 3 doctests failed". This is 
apparently a pickling issue.

For example, see

https://patchbot.sagemath.org/log/17093/LinuxMint/18.1/x86_64/4.4.0-83-generic/rk02-math/2017-07-30%2004:58:01?short

Frederic

Le dimanche 30 juillet 2017 10:53:46 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> 38f662f Updated SageMath version to 8.1.beta0
> 19f48ef Trac #23411: Fix pickling of matrix_gfpn_dense
> f15aa1f Trac #23383: Speeding up congruence-related lattice functions
> cb44570 Trac #23204: Remove RingHomomorphism_coercion
> 3c539ee Trac #23028: Cannot construct module generator for A2 dual KR 
> crystals
> 84f4bec Trac #22605: Better error handling of the polyhedron constructor 
> for non-embedded NumberField and floats.
> 0f7f765 Trac #20138: Information set decoding for linear codes
> b2f4c27 Trac #12657: Better implementation of Frobenius automorphism
> 175e067 Trac #23523: Fix subtraction of affine/loop Lie algebra elements
> 5421bde Trac #23453: Element._set_parent(): check that argument is a parent
> bb3a29c Trac #23444: cleanup of sandpiles
> cede2f9 Trac #23442: py3: removal of __cmp__ in poset elements
> ee71b6e Trac #23440: Various Cython fixes to IndexedFreeModuleElement
> 3683072 Trac #23439: Multisegments _sig does not return a triple when 
> highest weight element
> a807181 Trac #23433: Swap x and y in `AbstractLinearCode.weight_enumerator`
> ed8ee20 Trac #23431: enhancements to free pre-Lie algebras
> 5b7c608 Trac #23413: Move various things to src/sage/cpython
> 42f4708 Trac #23409: py3: remove some cmp in doc of pyx files
> cb89e26 Trac #23407: Don't link C modules with -lstdc++
> 54665cd Trac #23405: Upgrading experimental GAP3 package to version 04jul17
> 7703933 Trac #23404: Implement wrapperdescr_call without checking
> 3c72b78 Trac #23394: Fix script example in the programming tutorial
> ac2f540 Trac #23392: Wrong certificate from is_relatively_complemented
> 1ba6854 Trac #23390: Show method of semidefinite programming does no 
> carriage return
> 1c07756 Trac #23389: Some curation in semidefinite programming html doc
> 138166d Trac #23388: faster floor for number field elements
> ef20f8d Trac #23387: py3: fixing a new bad zip doctest
> a453568 Trac #23385: py3: rich comparison for sage/structure
> 9759ed2 Trac #23384: py3: rich comparison for root systems
> d4445e3 Trac #23382: Clean up matroid constructor
> 2914a76 Trac #23235: Fast p-adic exponential
> 6632ec1 Trac #22211: Upgrade prompt_toolkit to 1.0.9
> 4602a83 Trac #23370: py3: cmp in schemes : divisor_group and abstract 
> jacobian
> 6fc7f50 Trac #23367: py3 : rich comparison for the groups
> d41e3d8 Trac #23366: py3: cmp in continued fractions / Klyachko sheaves / 
> coxeter3
> c66d7bd Trac #23364: More Sphinx 1.5 fixes
> 4ade915 Trac #23360: Upgrade to Cython 0.26
> e193a6b Trac #23357: upgrade gf2x to version 1.2
> beda263 Trac #23354: numerical noise in libs/lcalc/lcalc_Lfuntion.pyx with 
> clang-4 and icc
> caf0485 Trac #23351: Random failure in a cryptominisat optional doctest in 
> boolean_polynomials.solve
> 083fc6d Trac #23347: The decomposition of a Dyck word into prime factors
> 1d3b0e6 Trac #23345: conversion for fractions
> da09577 Trac #23343: Clean up SpecializationMorphism
> 0ef6292 Trac #23338: Clean up polynomial constructor
> 3a7528f Trac #23337: Use variable names instead of symbolic variables
> e4c0af6 Trac #15585: Random failure in SimplicialComplex.is_cohen_macaulay
> 96cfc9e Trac #23322: py3: richcmp for modular symbols
> 3314255 Trac #23318: clean up the file misc/functional.py
> 9f435bc Trac #23300: non-absolute import in BasisExchangeMatroid
> 8cddaba Trac #23238: New syntax for GlobalOptions
> 16496f9 Trac #23228: Fix modulo operator for unramified floating point 
> elements
> eae14dc Trac #23207: Exterior powers of free modules of finite rank
> 5157d17 Trac #23192: some_elements is trivial for orders/number fields
> d987d7f Trac #23046: Patch python to allow linking with clang on linux
> d9936cc Trac #22889: Replace 'if x != False' with 'if x', etc.
> 78fa1e3 Trac #22564: Chromatic index
> 7b82f7f Trac #22462: Use ContainChildren to implement p_iter_fork
> 1062abdf Trac #22103: Printing p-adic numbers
> a3befda Trac #21996: Factorization in iterated extensions of finite fields
> 4d6ff57 Trac #20244: root_field() does not work for p-adic fields
> f647e6c Trac #20073: p-adic extensions with non-monic polynomials
> fd9d65f Trac #17968: Wrong integral of exp(x^3) from 1 to 2.
> 9a8eff9 Trac #16949: Improve gens() for elliptic curves over a finite field
> b9a6660 Trac #11960: bug in matrix of frobenius when p = 3
> 9196740 Trac #10680: deal with BooleanMonomialMonoid in polynomial 
> sequences
> 973d939 Trac #

[sage-release] Re: Sage 8.0.beta10 released

2017-06-11 Thread fchapoton2
It seems that this happens on several machines:

Error installing package gf2x-1.1.p2

See for example

https://patchbot.sagemath.org/log/0/LinuxMint/18.1/x86_64/4.4.0-59-generic/rk02-math/2017-06-11%2018:40:38?short

Frederic

Le dimanche 11 juin 2017 13:58:04 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> ffc8eff Updated SageMath version to 8.0.beta10
> 71caaea Trac #23169: is_squarefree can be implemented on the base as 
> _is_squarefree_univariate_polynomial
> 554fe30 Trac #23166: Conversion from a Function Field to its underlying 
> Polynomial Ring
> fadc6fe Trac #23156: py3: no __cmp__ in sudoku
> ef6abe1 Trac #23150: py3: caring for a few cmp in modular folder
> 0db5d48 Trac #23149: py3: get rid of cmp_props
> dba1080 Trac #23148: py3: richcmp in pari ring
> c32cc6e Trac #23147: py3: little cleanup of six and unicode
> 65ef964 Trac #23142: Fix missing synchronisation upon starting gap3
> ad64e9d Trac #23140: Gauss-Legendre Integrator
> 66bee23 Trac #23137: free dendriform algebras
> cc6cec7 Trac #23133: py3: deprecate lexico comparison for complex 
> intervals field
> f3881ba Trac #23130: py3: some care for map in various places
> bea0dd6 Trac #23043: Fast p-adic logarithm
> bc61743 Trac #22685: Improve 3D plot documentation
> 117e9e3 Trac #15104: Special case modn_dense matrix operations to improve 
> performance
> b8d4f05 Trac #23146: Upgrade to MPIR 3.0 broke SAGE_FAT_BINARY=yes
> ce4848e Trac #23117: Set up embeddings for extensions created using the 
> syntax R[alg]
> 8462378 Trac #23090: Some curation in desolvers.py
> 48c940f Trac #23066: sagenb update to 1.0
> bf41596 Trac #23044: py3: tolerance for u prefix in doctests
> df3f064 Trac #22769: tensor_product fails when one of the matrices has 0 
> rows or columns
> e15ab84 Trac #22202: Warning while working with algebraic numbers
> ca740c5 Trac #18430: Bug in is_hyperbolic
> a679ccd Trac #7675: shortest_path in c_graph should have an optional flag 
> distance=False to return only the distance
> 45e989a Trac #23126: Hidden bug: matching_polynomial() for graphs without 
> edges
> 69d5da2 Trac #23124: Fix sig_on/sig_off in boost_graph.pyx
> 380655a Trac #23123: Stop using cysignals .pxi files (part 5)
> 7a39f63 Trac #23121: Stop using cysignals .pxi files (part 4)
> 6b4b358 Trac #23110: typos in polyhedron base
> 597542d Trac #23108: Add an example to expand_trig
> 2ff000a Trac #23105: py3: remove 
> 78b166b Trac #22894: Symbolic expression.is_exact()
> ed1a82c Trac #22026: Doctests: Even reals are integers
> f9974f9 Trac #20348: p-adic floating point rings
> e5589be Trac #18882: Random failure in gf2x testsuite
> 042ecb6 Trac #23103: Move richcmp stuff to new file
> a69b17d Trac #23096: New format for the package installed stamp files in 
> $SAGE_SPKG_INST
> ccc7410 Trac #23079: genus of an Elliptic Curve over a finite field
> b26b353 Trac #22908: generator of random block graph
> e0ddc65 Trac #22706: Add more conversions from giac
> 2d1a0e5 Trac #12652: update or remove experimental spkg vtk and related 
> docs
> 375e9fa Trac #23128: sage.misc.cython broken on Cygwin
> 191ce3e Trac #23122: Wrong zlib library might be loaded
> a2901ca Trac #23095: autogen/interpreters does NOT work
> 9da6672 Trac #22628: SINGULAR_SO default is incorrect of Cygwin
> d9e145d Updated SageMath version to 8.0.beta9
>
>

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Re: [sage-release] Re: Sage 8.0.beta8 released

2017-05-31 Thread fchapoton2
Same for me as for John: after

sage -sh
math-readline
/bin/sh: 1: math: not found

the sage shell is not displaying what I am typing.

and even the bash shell itself is in the same not-displaying mode.

Frederic

Le mercredi 31 mai 2017 12:03:08 UTC+2, John Cremona a écrit :
>
> On 31 May 2017 at 10:43, Jeroen Demeyer  > wrote: 
> > On 2017-05-30 23:51, John H Palmieri wrote: 
> >> 
> >> I'm getting intermittent timeouts from src/sage/doctest/external.py, 
> and 
> >> in particular the "has_mathematica()" test. This is a new (but 
> >> underpowered) computer and it does not have mathematica installed. If I 
> >> run 
> >> 
> >> $ sage --sh 
> >> $ math-readline 
> >> 
> >> then 19 out of 20 times, it fails immediately 
> > 
> > 
> > Define "fails immediately". The fact that it only "fails immediately" 19 
> out 
> > of 20 times means that the "fails immediately" is somehow non-trivial. 
>
> I tried this.  First time it did actually start up Mathematica which 
> was a surprise since I did not know that my office desktop had 
> Mathematica on it... 
> On a machine which certainly does not, I got the message expected 
> (sage-sh) jec@lehner:sextics$ math-readline 
> /bin/sh: 1: math: not found 
>
> *but* after that the terminal was in a weird state, not echoing input, 
> which I got out of by blindly typing "exit" which got me out of the 
> Sage shell. 
>
> Conclusion: even when there is no Mathematica something non-trivial 
> and possibly bad is happening. 
>
> > 
> > 
> > -- 
> > You received this message because you are subscribed to the Google 
> Groups 
> > "sage-release" group. 
> > To unsubscribe from this group and stop receiving emails from it, send 
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[sage-release] Re: Sage 8.0.beta6 released

2017-05-13 Thread fchapoton2
for the calculus one (caused by the French locale), 
see https://trac.sagemath.org/ticket/22833

Le samedi 13 mai 2017 11:55:40 UTC+2, Emmanuel Charpentier a écrit :
>
> On Debian testig running on core i7 + 16 Gb RAM, ptestlong passes with two 
> failures :
>
> -
> sage -t --long src/sage/calculus/calculus.py  # 1 doctest failed
> sage -t --long src/sage/homology/simplicial_complex.py  # 1 doctest failed
> --
>
> Both have already been seen in 8.4.beta4 and 8.4.beta5 ; the second one is 
> transient (does not fail when run standalone).
>
> HTH,
>
> --
> Emmanuel Charpentier
>
>
>
> Le samedi 13 mai 2017 11:04:37 UTC+2, Volker Braun a écrit :
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>>
>> df03447 Updated SageMath version to 8.0.beta6
>> 86557bd Trac #22729: Expose some internal variables computed in 
>> hecke_series
>> f14995b Trac #21993: Polyhedron.integral_points(): OverflowError: value 
>> too large to convert to int
>> 3c79df8 Trac #21668: sage.stats.basic_stats.mode doesn't sort
>> 476ef25 Trac #19139: Implement categories for KR crystals
>> 540e6b9 Trac #17505: implement symbolic product
>> 2208923 Trac #22939: fixing a typo
>> 068b093 Trac #22674: Add irreducibles_poset()
>> dd7d64f Trac #22877: Wrong atan2 of complex arguments
>> 263e6d1 Trac #22773: Add random Stone lattice
>> 755298b Trac #22684: pynormaliz fails to build on 32bit system
>> 7c5814b Trac #19075: Speedup creation of Kleber tree
>> 4ee6131 Trac #22923: Fix documentation regarding cached functions in the 
>> Steenrod algebra code
>> 643ded5 Trac #22940: another typo
>> c2e84e2 Trac #22925: Fix Cython interface to Pynac's find_function
>> 7aa9ec8 Trac #22911: Reorganize some methods for loops
>> 3d17975 Trac #22906: improve add_clique to allow various iterable 
>> container
>> 21e33f7 Trac #22950: combinat/posets/posets.py fails when the optional 
>> package dot2tex is installed
>> b238720 Trac #22948: avoid "absolute_import" in tab completion
>> ef9d7e0 Trac #22943: Speedup rigged configuration bijection in type B
>> 5918bf2 Trac #22938: Polytopes normaliz backend doesn't handle a polytope 
>> with a trivial integral hull
>> 437154d Trac #22933: clean up deprecations in sandpile
>> c00fe01 Trac #22932: py3: remove one call to unicode in 
>> src/sage_setup/docbuild/__init__.py
>> f4e91c4 Trac #22931: Add missing sphinx labels to prep and other tutorials
>> 4d60046 Trac #22919: py3: some care for cmp in monoids folder
>> 2603c91 Trac #22929: Followup to #22666
>> b259b4c Trac #22910: Polynomial ring when is_field is NotImplemented
>> 9afa2a0 Trac #22642: Cythonize tensor product of crystals elements
>> 77a9ab3 Trac #22429: Some cleanup of the crystals files
>> 5d5c8fb Trac #21386: HochschildComplex does not pass its testsuite
>> 4410a16 Trac #18655: MV Polytopes and PBW crystals
>> ff9499e Trac #18303: faster comparisons in AA and QQbar
>> 46a728a Updated SageMath version to 8.0.beta5
>>
>>

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[sage-release] Re: Sage 7.6.beta6 released

2017-03-04 Thread fchapoton2
Trying to build with SAGE_PYTHON3=yes now fails much earlier than where it 
should:

[sagelib-7.6.beta6] Traceback (most recent call last):
[sagelib-7.6.beta6]   File "setup.py", line 54, in 
[sagelib-7.6.beta6] import sage.env
[sagelib-7.6.beta6]   File "/home/chapoton/sage3/src/sage/env.py", line 87, 
in 
[sagelib-7.6.beta6] _add_variable_or_fallback('UNAME',   
os.uname()[0])
[sagelib-7.6.beta6]   File "/home/chapoton/sage3/src/sage/env.py", line 71, 
in _add_variable_or_fallback
[sagelib-7.6.beta6] import six
[sagelib-7.6.beta6] ImportError: No module named six

whereas it used to fail somewhere in the cythonization of pyx files, 
because of some remaining calls to cmp().

This change of behaviour may come 
from https://trac.sagemath.org/ticket/22354 or maybe not. Could also be a 
mising dependency on six somewhere.

Any idea ? Maybe it would be a good thing if somebody else tried the 
Python3 compilation of sage to see if the same thing happens.

Frederic

Le samedi 4 mars 2017 10:45:28 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> I'm proposing that this will be the last beta version, next will be 
> 7.6.rc0 and after 7.6 will come Sage 8.0
>
> fd5f71a Updated SageMath version to 7.6.beta6
> 7396817 Trac #22491: make lrslib and lidia a build-time dependencies of 
> latte_int
> 06c397a Trac #22486: hyperboloid model accepts invalid points
> 5dff1a4 Trac #22484: py3 get rid of last call to cmp() in parent.pyx
> fd2535f Trac #21976: multivariate laurent polynomial constructor: 
> shortcuts for speedup
> 22bdd04 Trac #22464: Add stopgap for #22381
> 7ac2706 Trac #22480: Experimental package GAP3 broken
> 77530c7 Trac #22479: py3 more cases of add_metaclass
> 9b04c44 Trac #22474: py3 modernize metaclass in combinat folder
> 333066a Trac #22473: Remove patchbot optional spkg
> c1f1a71 Trac #22469: Deprecate/remove sage/geometry/polytope.py
> 3d5fc3f Trac #22193: Port cypari2 documentation as a standalone doctests
> ba2a0e6 Trac #21267: Port SageNB widgets/interact to Jupyter
> e27cabd Trac #21432: Missing link to transducers.Recursion in 
> documentation of class TransducerGenerators
> 981a6cf Trac #22463: Skip sage_setup tests when not running in a git 
> repository
> a962787 Trac #22449: SAGE_BROWSER is being ignored while launching Jupyter 
> notebook
> 8f5457d Trac #22460: py3 taking care of some range
> 68b0490 Trac #22459: py3: get rid of _richcmp mechanism in Parent
> dbeaf76 Trac #22457: py3: more zip as iterators
> 9e47948 Trac #22446: py3: small cmp step (cmp() in doc, __cmp__ in code)
> 211c8de Trac #22351: PyString_AsString is gone in Python3
> 0d233f2 Trac #20849: Improve grs.py documentation
> 734b04d Trac #22428: fixing typos of of & the the
> 60428b4 Trac #22265: Fix Dynatomic Polynomials
> 9173327 Trac #22448: py3 : spring cleanup of comparison in Element classes 
> in modular
> 54e4cd7 Trac #22447: py3 : spring cleanup of comparison in Element classes 
> in combinat
> ccfb9dc Trac #22442: Compile pynac interface with SINGULAR_CFLAGS to find 
> its headers
> 0227925 Trac #22440: Work around Python's inadequate SIGPIPE handling
> df819fa Trac #22437: Use system libGAP paths
> 579f1bb Trac #22430: better base ring for finite Coxeter matrix groups
> 6cc3732 Trac #22418: Always use V=1 for logfiles
> 1bb5ce9 Trac #22382: Fix facade option for DisjointUnionEnumeratedSets
> 700d8b1 Trac #22372: Fix use of comparison in simplicial_complex
> a0220eb Trac #22364: Upgrade to pynac-0.7.5
> cc01eb9 Trac #22421: Pynac's to_gamma() is buggy
> 36bcfa6 Updated SageMath version to 7.6.beta5
>
>

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[sage-release] Re: Sage 7.5.rc3 released

2017-01-10 Thread fchapoton2
It seems to me that the tag 7.5.rc3 is missing somewhere, and this perturbs 
the behaviour of patchbots.

Frederic

Le dimanche 8 janvier 2017 15:32:24 UTC+1, Volker Braun a écrit :
>
> True, seems like there is a problem in pushing versions to github. I think 
> its a git hook on trac.sagemath.org, not sure why it didn't work this 
> time.
>
> I pushed 7.5.rc3 to github by hand.
>
>  
>
> On Sunday, January 8, 2017 at 3:21:24 PM UTC+1, Eric Gourgoulhon wrote:
>>
>> Hi Volker,
>>
>> When I do 
>> git pull origin develop
>> I get only rc2.
>>
>> Here are my settings:
>> git remote -v
>> originhttps://github.com/sagemath/sage.git (fetch)
>> originhttps://github.com/sagemath/sage.git (push)
>>
>> git branch -v
>> * develop a6f8b9c Updated SageMath version to 7.5.rc2
>>   master  1b1e6f6 Updated SageMath version to 7.4
>>
>> Best regards,
>>
>> Eric.
>>
>> Le dimanche 8 janvier 2017 12:15:37 UTC+1, Volker Braun a écrit :
>>>
>>> This should fix the OSX compile issues, hopefully this will be the final 
>>> rc. Give it a try!
>>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html
>>>
>>> 8c42c34 Updated SageMath version to 7.5.rc3
>>> 88a6d00 Trac #22143: fixing jones database optional doctests (2)
>>> 71f1855 Trac #22037: Upgrade to Python 2.7.13
>>> a6f8b9c Updated SageMath version to 7.5.rc2
>>>
>>>

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[sage-release] Re: Sage 7.5.beta6 released

2016-12-10 Thread fchapoton2
culprit ticket is https://trac.sagemath.org/ticket/21613#comment:63

Le samedi 10 décembre 2016 11:50:57 UTC+1, fchap...@gmail.com a écrit :
>
> I mean that "export SAGE_PYTHON3=yes & make build" breaks at the point 
> displayed in my message, and it was not doing that before 7.5.b6.
>
> I monitor on every new release where is the first py3 problem. This is a 
> regression.
>
> Frederic
>
> Le samedi 10 décembre 2016 11:43:33 UTC+1, Dima Pasechnik a écrit :
>>
>>
>>
>> On Saturday, December 10, 2016 at 10:13:58 AM UTC, fchap...@gmail.com 
>> wrote:
>>>
>>> Hello
>>>
>>> it seems that once again somebody broke the python3 compatibility of the 
>>> scripts:
>>>
>>> [sagelib-7.5.beta6]   File 
>>> "/home/chapoton/sage3/src/sage_setup/autogen/__init__.py", line 9, in 
>>> autogen_all
>>> [sagelib-7.5.beta6] pari.rebuild()
>>> [sagelib-7.5.beta6]   File 
>>> "/home/chapoton/sage3/src/sage_setup/autogen/pari/__init__.py", line 11, in 
>>> rebuild
>>> [sagelib-7.5.beta6] src_files = [join(pari_share(), 'pari.desc')] + \
>>> [sagelib-7.5.beta6]   File 
>>> "/home/chapoton/sage3/local/lib/python3.5/posixpath.py", line 89, in join
>>> [sagelib-7.5.beta6] genericpath._check_arg_types('join', a, *p)
>>> [sagelib-7.5.beta6]   File 
>>> "/home/chapoton/sage3/local/lib/python3.5/genericpath.py", line 145, in 
>>> _check_arg_types
>>> [sagelib-7.5.beta6] raise TypeError("Can't mix strings and bytes in 
>>> path components") from None
>>> [sagelib-7.5.beta6] TypeError: Can't mix strings and bytes in path 
>>> components
>>>
>>> I have not searched for the culprit, but please take care of that.
>>> In the future, the scripts should be *TESTED* for python3 compatibility.
>>>
>>
>> Scripts? Do you mean the places where the system Python is Python 3?
>>   
>>
>>>
>>> Frederic
>>>
>>> Le samedi 10 décembre 2016 01:16:38 UTC+1, Volker Braun a écrit :

 As always, you can get the latest beta version from the "develop" git 
 branch. Alternatively, the self-contained source tarball is at 
 http://www.sagemath.org/download-latest.html

 608cfc2 Updated SageMath version to 7.5.beta6
 98f6946 Trac #22039: Docstring on SageNB error with moebius algebra
 34d61b9 Trac #22011: Make giac a standard package
 33ba206 Trac #21793: Document whitespace policy, provide editor 
 configurations for non-Python source files
 54934ba Trac #22031: PEP8 compliance: replace "== None" by "is None" in 
 graphs package
 d0e3225 Trac #21625: Strange linking order for omalloc due to pkgconfig 
 bug
 f9c7b2e Trac #21613: Don't use make for autogenerated modules in sagelib
 214e1d2 Trac #21608: Univariate Polynomial Ring does not support lc, 
 lm, lt
 763da96 Trac #21718: Add pictures to polygon.py
 1af2b15 Trac #22023: fixing typos and and & the the
 36c1fa0 Trac #21986: LaTeX and digraph of crystals.infinity.Tableaux 
 never finish
 e5d3852 Trac #21906: Bug in bessel_K
 1a4df33 Trac #22020: py3 get rid of cmp() in fraction field element pyx
 209c15d Trac #22012: Py3 : Handle cmp() in pyx files in misc and modules
 bd1c6f1 Trac #21989: Remove _richcmp_ from FastDoubleFunc
 7c74580 Trac #21778: correct refinement in cvxopt sdp backend
 94a6e9d Trac #21669: Segmentation fault when saving certain empty 
 matrices
 b07da46 Trac #21587: Implement ribbon graphs
 efe93f9 Trac #21428: AssertionError plotting real part of complex 
 function with float coefficients
 99f6548 Trac #22015: Document use of SAGE_EXTCODE
 ea8c03a Trac #22014: Move Three.js template to src/ext
 0cd788e Trac #22004: Allow algorithm='sympy' in symbolic_sum function
 c24e811 Trac #21910: py3: our own integer cmp and permutation groups
 79ca171 Trac #21393: Partial bindings for Arb polynomials with complex 
 coefficients
 34d779d Trac #20680: Some optimizations for addition in combinatorial 
 free modules and dict_* methods
 0e02b51 Trac #22009: sage -t src/sage/misc/latex.py opens 2 sage.pdf 
 file
 53a3308 Trac #21903: LatticePoset: add neutral_elements
 d5bb829 Trac #16457: Rename xrange() to range()
 df0e68f8 Trac #21998: any_root() sometimes fails over finite fields
 fa39630 Trac #21997: Fix the check for Littlewood-Richardson tableaux
 f6ba228 Trac #21983: Remaining py3 syntax level errors
 163489e Updated SageMath version to 7.5.beta5



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[sage-release] Re: Sage 7.5.beta6 released

2016-12-10 Thread fchapoton2
I mean that "export SAGE_PYTHON3=yes & make build" breaks at the point 
displayed in my message, and it was not doing that before 7.5.b6.

I monitor on every new release where is the first py3 problem. This is a 
regression.

Frederic

Le samedi 10 décembre 2016 11:43:33 UTC+1, Dima Pasechnik a écrit :
>
>
>
> On Saturday, December 10, 2016 at 10:13:58 AM UTC, fchap...@gmail.com 
> wrote:
>>
>> Hello
>>
>> it seems that once again somebody broke the python3 compatibility of the 
>> scripts:
>>
>> [sagelib-7.5.beta6]   File 
>> "/home/chapoton/sage3/src/sage_setup/autogen/__init__.py", line 9, in 
>> autogen_all
>> [sagelib-7.5.beta6] pari.rebuild()
>> [sagelib-7.5.beta6]   File 
>> "/home/chapoton/sage3/src/sage_setup/autogen/pari/__init__.py", line 11, in 
>> rebuild
>> [sagelib-7.5.beta6] src_files = [join(pari_share(), 'pari.desc')] + \
>> [sagelib-7.5.beta6]   File 
>> "/home/chapoton/sage3/local/lib/python3.5/posixpath.py", line 89, in join
>> [sagelib-7.5.beta6] genericpath._check_arg_types('join', a, *p)
>> [sagelib-7.5.beta6]   File 
>> "/home/chapoton/sage3/local/lib/python3.5/genericpath.py", line 145, in 
>> _check_arg_types
>> [sagelib-7.5.beta6] raise TypeError("Can't mix strings and bytes in 
>> path components") from None
>> [sagelib-7.5.beta6] TypeError: Can't mix strings and bytes in path 
>> components
>>
>> I have not searched for the culprit, but please take care of that.
>> In the future, the scripts should be *TESTED* for python3 compatibility.
>>
>
> Scripts? Do you mean the places where the system Python is Python 3?
>   
>
>>
>> Frederic
>>
>> Le samedi 10 décembre 2016 01:16:38 UTC+1, Volker Braun a écrit :
>>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html
>>>
>>> 608cfc2 Updated SageMath version to 7.5.beta6
>>> 98f6946 Trac #22039: Docstring on SageNB error with moebius algebra
>>> 34d61b9 Trac #22011: Make giac a standard package
>>> 33ba206 Trac #21793: Document whitespace policy, provide editor 
>>> configurations for non-Python source files
>>> 54934ba Trac #22031: PEP8 compliance: replace "== None" by "is None" in 
>>> graphs package
>>> d0e3225 Trac #21625: Strange linking order for omalloc due to pkgconfig 
>>> bug
>>> f9c7b2e Trac #21613: Don't use make for autogenerated modules in sagelib
>>> 214e1d2 Trac #21608: Univariate Polynomial Ring does not support lc, lm, 
>>> lt
>>> 763da96 Trac #21718: Add pictures to polygon.py
>>> 1af2b15 Trac #22023: fixing typos and and & the the
>>> 36c1fa0 Trac #21986: LaTeX and digraph of crystals.infinity.Tableaux 
>>> never finish
>>> e5d3852 Trac #21906: Bug in bessel_K
>>> 1a4df33 Trac #22020: py3 get rid of cmp() in fraction field element pyx
>>> 209c15d Trac #22012: Py3 : Handle cmp() in pyx files in misc and modules
>>> bd1c6f1 Trac #21989: Remove _richcmp_ from FastDoubleFunc
>>> 7c74580 Trac #21778: correct refinement in cvxopt sdp backend
>>> 94a6e9d Trac #21669: Segmentation fault when saving certain empty 
>>> matrices
>>> b07da46 Trac #21587: Implement ribbon graphs
>>> efe93f9 Trac #21428: AssertionError plotting real part of complex 
>>> function with float coefficients
>>> 99f6548 Trac #22015: Document use of SAGE_EXTCODE
>>> ea8c03a Trac #22014: Move Three.js template to src/ext
>>> 0cd788e Trac #22004: Allow algorithm='sympy' in symbolic_sum function
>>> c24e811 Trac #21910: py3: our own integer cmp and permutation groups
>>> 79ca171 Trac #21393: Partial bindings for Arb polynomials with complex 
>>> coefficients
>>> 34d779d Trac #20680: Some optimizations for addition in combinatorial 
>>> free modules and dict_* methods
>>> 0e02b51 Trac #22009: sage -t src/sage/misc/latex.py opens 2 sage.pdf file
>>> 53a3308 Trac #21903: LatticePoset: add neutral_elements
>>> d5bb829 Trac #16457: Rename xrange() to range()
>>> df0e68f8 Trac #21998: any_root() sometimes fails over finite fields
>>> fa39630 Trac #21997: Fix the check for Littlewood-Richardson tableaux
>>> f6ba228 Trac #21983: Remaining py3 syntax level errors
>>> 163489e Updated SageMath version to 7.5.beta5
>>>
>>>

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[sage-release] Re: Sage 7.5.beta6 released

2016-12-10 Thread fchapoton2
Hello

it seems that once again somebody broke the python3 compatibility of the 
scripts:

[sagelib-7.5.beta6]   File 
"/home/chapoton/sage3/src/sage_setup/autogen/__init__.py", line 9, in 
autogen_all
[sagelib-7.5.beta6] pari.rebuild()
[sagelib-7.5.beta6]   File 
"/home/chapoton/sage3/src/sage_setup/autogen/pari/__init__.py", line 11, in 
rebuild
[sagelib-7.5.beta6] src_files = [join(pari_share(), 'pari.desc')] + \
[sagelib-7.5.beta6]   File 
"/home/chapoton/sage3/local/lib/python3.5/posixpath.py", line 89, in join
[sagelib-7.5.beta6] genericpath._check_arg_types('join', a, *p)
[sagelib-7.5.beta6]   File 
"/home/chapoton/sage3/local/lib/python3.5/genericpath.py", line 145, in 
_check_arg_types
[sagelib-7.5.beta6] raise TypeError("Can't mix strings and bytes in 
path components") from None
[sagelib-7.5.beta6] TypeError: Can't mix strings and bytes in path 
components

I have not searched for the culprit, but please take care of that.
In the future, the scripts should be *TESTED* for python3 compatibility.

Frederic

Le samedi 10 décembre 2016 01:16:38 UTC+1, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> 608cfc2 Updated SageMath version to 7.5.beta6
> 98f6946 Trac #22039: Docstring on SageNB error with moebius algebra
> 34d61b9 Trac #22011: Make giac a standard package
> 33ba206 Trac #21793: Document whitespace policy, provide editor 
> configurations for non-Python source files
> 54934ba Trac #22031: PEP8 compliance: replace "== None" by "is None" in 
> graphs package
> d0e3225 Trac #21625: Strange linking order for omalloc due to pkgconfig bug
> f9c7b2e Trac #21613: Don't use make for autogenerated modules in sagelib
> 214e1d2 Trac #21608: Univariate Polynomial Ring does not support lc, lm, lt
> 763da96 Trac #21718: Add pictures to polygon.py
> 1af2b15 Trac #22023: fixing typos and and & the the
> 36c1fa0 Trac #21986: LaTeX and digraph of crystals.infinity.Tableaux never 
> finish
> e5d3852 Trac #21906: Bug in bessel_K
> 1a4df33 Trac #22020: py3 get rid of cmp() in fraction field element pyx
> 209c15d Trac #22012: Py3 : Handle cmp() in pyx files in misc and modules
> bd1c6f1 Trac #21989: Remove _richcmp_ from FastDoubleFunc
> 7c74580 Trac #21778: correct refinement in cvxopt sdp backend
> 94a6e9d Trac #21669: Segmentation fault when saving certain empty matrices
> b07da46 Trac #21587: Implement ribbon graphs
> efe93f9 Trac #21428: AssertionError plotting real part of complex function 
> with float coefficients
> 99f6548 Trac #22015: Document use of SAGE_EXTCODE
> ea8c03a Trac #22014: Move Three.js template to src/ext
> 0cd788e Trac #22004: Allow algorithm='sympy' in symbolic_sum function
> c24e811 Trac #21910: py3: our own integer cmp and permutation groups
> 79ca171 Trac #21393: Partial bindings for Arb polynomials with complex 
> coefficients
> 34d779d Trac #20680: Some optimizations for addition in combinatorial free 
> modules and dict_* methods
> 0e02b51 Trac #22009: sage -t src/sage/misc/latex.py opens 2 sage.pdf file
> 53a3308 Trac #21903: LatticePoset: add neutral_elements
> d5bb829 Trac #16457: Rename xrange() to range()
> df0e68f8 Trac #21998: any_root() sometimes fails over finite fields
> fa39630 Trac #21997: Fix the check for Littlewood-Richardson tableaux
> f6ba228 Trac #21983: Remaining py3 syntax level errors
> 163489e Updated SageMath version to 7.5.beta5
>
>

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Re: [sage-release] Re: cannot build 7.5.b3 (twice)

2016-11-19 Thread fchapoton2
Le samedi 19 novembre 2016 09:36:06 UTC+1, Jeroen Demeyer a écrit :
> > Le samedi 19 novembre 2016 00:36:58 UTC+1, Volker Braun a écrit :
> >> What are the permissions on your src/ directory?
> >>
> >>
> >
> > It seems to be 775. I do not think I have changed anything about that 
> > recently.
> 
> This should fix it:
> 
> chmod 0755 src

Indeed, this seems to work. Thanks. But maybe I will not be the only one 
affected.

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[sage-release] Re: cannot build 7.5.b3 (twice)

2016-11-18 Thread fchapoton2
Le samedi 19 novembre 2016 00:36:58 UTC+1, Volker Braun a écrit :
> What are the permissions on your src/ directory?
> 
> 

It seems to be 775. I do not think I have changed anything about that recently.

laptop:~/sage$ ls -ld src
drwxrwxr-x 8 chapoton chapoton 4096 nov.  18 22:14 src
laptop:~/sage$ umask
0022
laptop:~/sage$ groups
chapoton adm cdrom sudo dip plugdev lpadmin sambashare

> On Friday, November 18, 2016 at 10:34:15 PM UTC+1, fchap...@gmail.com wrote:I 
> have two machines running ubuntu 16.10, on which I have just failed to build 
> 7.5.b3 !  :(
> 
> 
> 
> I then did "make distclean" and tried again, and got the same failure:
> 
> 
> 
> [sagelib-7.5.beta3] rm -f sage/libs/pari/auto_*.pxi
> 
> [sagelib-7.5.beta3] python -c "from sage_setup.autogen.pari import rebuild; 
> rebuild()"
> 
> [sagelib-7.5.beta3] sys:1: RuntimeWarning: not adding directory '' to 
> sys.path since it's writable by an untrusted group.
> 
> [sagelib-7.5.beta3] Untrusted users could put files in this directory which 
> might then be imported by your Python code. As a general precaution from 
> similar exploits, you should not execute Python code from this directory
> 
> [sagelib-7.5.beta3] Traceback (most recent call last):
> 
> [sagelib-7.5.beta3]   File "", line 1, in 
> 
> [sagelib-7.5.beta3] ImportError: No module named sage_setup.autogen.pari
> 
> [sagelib-7.5.beta3] generate_py_source.mk:10 : la recette pour la cible « 
> sage/libs/cypari2/auto_gen.pxi » a échouée
> 
> [sagelib-7.5.beta3] make[4]: *** [sage/libs/cypari2/auto_gen.pxi] Erreur 1
> 
> 
> 
> What is this ?
> 
> 
> 
> Frederic

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[sage-release] cannot build 7.5.b3 (twice)

2016-11-18 Thread fchapoton2
I have two machines running ubuntu 16.10, on which I have just failed to build 
7.5.b3 !  :(

I then did "make distclean" and tried again, and got the same failure:

[sagelib-7.5.beta3] rm -f sage/libs/pari/auto_*.pxi
[sagelib-7.5.beta3] python -c "from sage_setup.autogen.pari import rebuild; 
rebuild()"
[sagelib-7.5.beta3] sys:1: RuntimeWarning: not adding directory '' to sys.path 
since it's writable by an untrusted group.
[sagelib-7.5.beta3] Untrusted users could put files in this directory which 
might then be imported by your Python code. As a general precaution from 
similar exploits, you should not execute Python code from this directory
[sagelib-7.5.beta3] Traceback (most recent call last):
[sagelib-7.5.beta3]   File "", line 1, in 
[sagelib-7.5.beta3] ImportError: No module named sage_setup.autogen.pari
[sagelib-7.5.beta3] generate_py_source.mk:10 : la recette pour la cible « 
sage/libs/cypari2/auto_gen.pxi » a échouée
[sagelib-7.5.beta3] make[4]: *** [sage/libs/cypari2/auto_gen.pxi] Erreur 1

What is this ?

Frederic

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