[sage-release] Re: Sage 10.3.rc0 released

[Matthias Köppe]

I have a workaround for the pillow/openjpeg problem 
in https://github.com/sagemath/sage/pull/37505

On Wednesday, February 28, 2024 at 5:47:04 PM UTC-8 Matthias Köppe wrote:

> Can confirm also on macOS x86_64 with just upgraded openjpeg. 
> And upgrading to pillow-10.2.0 (latest) does NOT help.
>
> On Wednesday, February 28, 2024 at 2:22:08 PM UTC-8 John H Palmieri wrote:
>
>> The failing command:
>>
>> gcc -fno-strict-overflow -Wsign-compare -Wunreachable-code -fno-common 
>> -dynamic -DNDEBUG -g -O3 -Wall -isysroot 
>> /Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk -g -O2 -g 
>> -DHAVE_LIBTIFF -DHAVE_LIBJPEG -DHAVE_OPENJPEG -DHAVE_LIBZ -DHAVE_XCB 
>> -DPILLOW_VERSION=\"10.1.0\" 
>> -I/opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5 
>> -I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include 
>> -I/opt/homebrew/Cellar/libtiff/4.6.0/include 
>> -I/opt/homebrew/Cellar/zstd/1.5.5/include 
>> -I/opt/homebrew/Cellar/xz/5.4.6/include 
>> -I/opt/homebrew/Cellar/freetype/2.13.2/include/freetype2 
>> -I/opt/homebrew/Cellar/libpng/1.6.42/include/libpng16 
>> -I/opt/homebrew/Cellar/harfbuzz/8.3.0_1/include/harfbuzz 
>> -I/opt/homebrew/Cellar/glib/2.78.4/include/glib-2.0 
>> -I/opt/homebrew/Cellar/glib/2.78.4/lib/glib-2.0/include 
>> -I/opt/homebrew/Cellar/gettext/0.22.5/include 
>> -I/opt/homebrew/Cellar/pcre2/10.42/include 
>> -I/opt/homebrew/Cellar/graphite2/1.3.14/include 
>> -I/opt/homebrew/Cellar/fribidi/1.0.13/include/fribidi 
>> -I/opt/homebrew/Cellar/little-cms2/2.16/include 
>> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/include 
>> -I/opt/homebrew/Cellar/primesieve/12.0/include 
>> -I/opt/homebrew/Cellar/bdw-gc/8.2.6/include 
>> -I/opt/homebrew/Cellar/libpng/1.6.42/include 
>> -I/opt/homebrew/Cellar/ntl/11.5.1/include 
>> -I/opt/homebrew/Cellar/readline/8.2.10/include -I/opt/homebrew/include 
>> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
>>  
>> -I/opt/homebrew/Cellar/freetype/2.13.2/include 
>> -I/Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/usr/include 
>> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
>>  
>> -I/opt/homebrew/opt/pyt...@3.12/Frameworks/Python.framework/Versions/3.12/include/python3.12
>>  
>> -c src/libImaging/Jpeg2KDecode.c -o 
>> build/temp.macosx-14.0-arm64-cpython-312/src/libImaging/Jpeg2KDecode.o
>>
>> Compared to the previous version (from January): the differences are
>>
>> - the new version includes -fno-strict-overflow
>> - the old version includes -fwrapv
>> - various version numbers have changed, of course
>>
>>
>> On Wednesday, February 28, 2024 at 2:16:42 PM UTC-8 John H Palmieri wrote:
>>
>>> OS X, Apple Silicon, with many homebrew packages, including a recently 
>>> upgraded openjpeg (from 2.5.0 to 2.5.1): pillow is failing to build, with 
>>> the error message
>>>
>>>   src/libImaging/Jpeg2KDecode.c:673:43: error: too few arguments to 
>>> function call, expected 3, have 2
>>>   opj_stream_set_user_data(stream, state);
>>>     ^
>>>   
>>> /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5/openjpeg.h:1235:27:
>>>  
>>> note: 'opj_stream_set_user_data' declared here
>>>   OPJ_API void OPJ_CALLCONV opj_stream_set_user_data(opj_stream_t* 
>>> p_stream,
>>> ^
>>>   1 error generated.
>>>   error: command '/usr/bin/gcc' failed with exit code 1
>>>   error: subprocess-exited-with-error
>>>   
>>>   × Building wheel for Pillow (pyproject.toml) did not run successfully.
>>>   │ exit code: 1
>>>   ╰─> See above for output.
>>>   
>>> I'm a little confused about jpeg, though: although this is using 
>>> openjpeg-2.5.1, Sage's top-level config.log file says
>>>
>>> pkg_cv_libjpeg_CFLAGS=-I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
>>> pkg_cv_libjpeg_LIBS='-L/opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib 
>>> -ljpeg'
>>>
>>> pillow's log file says
>>>
>>> Looking for `libjpeg` using pkg-config.
>>> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib
>>> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
>>> Looking for `libopenjp2` using pkg-config.
>>> Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/lib
>>> Appending path 
>>> /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5
>>>
>>> This is similar to a log file from a successful build, though.  (I don't 
>>> know how to attach files from the browser interface to Google groups.)
>>>
>>> Suggestions?
>>>
>>>
>>>
>>>
>>> On Sunday, February 25, 2024 at 10:44:20 AM UTC-8 Volker Braun wrote:
>>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html
>>>
>>> acbe15dcd87 (HEAD -> develop, tag: 10.3.rc0, github/develop) Updated 
>>> SageMath version to 10.3.rc0
>>> 0fb793fa91a gh-37410: minor fixes in sandpiles
>>> 57d4e09af50 gh-37405: links for errors in doc of 

[sage-release] Re: Sage 10.3.rc0 released

[Matthias Köppe]

Can confirm also on macOS x86_64 with just upgraded openjpeg. 
And upgrading to pillow-10.2.0 (latest) does NOT help.

On Wednesday, February 28, 2024 at 2:22:08 PM UTC-8 John H Palmieri wrote:

> The failing command:
>
> gcc -fno-strict-overflow -Wsign-compare -Wunreachable-code -fno-common 
> -dynamic -DNDEBUG -g -O3 -Wall -isysroot 
> /Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk -g -O2 -g 
> -DHAVE_LIBTIFF -DHAVE_LIBJPEG -DHAVE_OPENJPEG -DHAVE_LIBZ -DHAVE_XCB 
> -DPILLOW_VERSION=\"10.1.0\" 
> -I/opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5 
> -I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include 
> -I/opt/homebrew/Cellar/libtiff/4.6.0/include 
> -I/opt/homebrew/Cellar/zstd/1.5.5/include 
> -I/opt/homebrew/Cellar/xz/5.4.6/include 
> -I/opt/homebrew/Cellar/freetype/2.13.2/include/freetype2 
> -I/opt/homebrew/Cellar/libpng/1.6.42/include/libpng16 
> -I/opt/homebrew/Cellar/harfbuzz/8.3.0_1/include/harfbuzz 
> -I/opt/homebrew/Cellar/glib/2.78.4/include/glib-2.0 
> -I/opt/homebrew/Cellar/glib/2.78.4/lib/glib-2.0/include 
> -I/opt/homebrew/Cellar/gettext/0.22.5/include 
> -I/opt/homebrew/Cellar/pcre2/10.42/include 
> -I/opt/homebrew/Cellar/graphite2/1.3.14/include 
> -I/opt/homebrew/Cellar/fribidi/1.0.13/include/fribidi 
> -I/opt/homebrew/Cellar/little-cms2/2.16/include 
> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/include 
> -I/opt/homebrew/Cellar/primesieve/12.0/include 
> -I/opt/homebrew/Cellar/bdw-gc/8.2.6/include 
> -I/opt/homebrew/Cellar/libpng/1.6.42/include 
> -I/opt/homebrew/Cellar/ntl/11.5.1/include 
> -I/opt/homebrew/Cellar/readline/8.2.10/include -I/opt/homebrew/include 
> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
>  
> -I/opt/homebrew/Cellar/freetype/2.13.2/include 
> -I/Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/usr/include 
> -I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
>  
> -I/opt/homebrew/opt/pyt...@3.12/Frameworks/Python.framework/Versions/3.12/include/python3.12
>  
> -c src/libImaging/Jpeg2KDecode.c -o 
> build/temp.macosx-14.0-arm64-cpython-312/src/libImaging/Jpeg2KDecode.o
>
> Compared to the previous version (from January): the differences are
>
> - the new version includes -fno-strict-overflow
> - the old version includes -fwrapv
> - various version numbers have changed, of course
>
>
> On Wednesday, February 28, 2024 at 2:16:42 PM UTC-8 John H Palmieri wrote:
>
>> OS X, Apple Silicon, with many homebrew packages, including a recently 
>> upgraded openjpeg (from 2.5.0 to 2.5.1): pillow is failing to build, with 
>> the error message
>>
>>   src/libImaging/Jpeg2KDecode.c:673:43: error: too few arguments to 
>> function call, expected 3, have 2
>>   opj_stream_set_user_data(stream, state);
>>     ^
>>   
>> /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5/openjpeg.h:1235:27: 
>> note: 'opj_stream_set_user_data' declared here
>>   OPJ_API void OPJ_CALLCONV opj_stream_set_user_data(opj_stream_t* 
>> p_stream,
>> ^
>>   1 error generated.
>>   error: command '/usr/bin/gcc' failed with exit code 1
>>   error: subprocess-exited-with-error
>>   
>>   × Building wheel for Pillow (pyproject.toml) did not run successfully.
>>   │ exit code: 1
>>   ╰─> See above for output.
>>   
>> I'm a little confused about jpeg, though: although this is using 
>> openjpeg-2.5.1, Sage's top-level config.log file says
>>
>> pkg_cv_libjpeg_CFLAGS=-I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
>> pkg_cv_libjpeg_LIBS='-L/opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib 
>> -ljpeg'
>>
>> pillow's log file says
>>
>> Looking for `libjpeg` using pkg-config.
>> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib
>> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
>> Looking for `libopenjp2` using pkg-config.
>> Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/lib
>> Appending path 
>> /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5
>>
>> This is similar to a log file from a successful build, though.  (I don't 
>> know how to attach files from the browser interface to Google groups.)
>>
>> Suggestions?
>>
>>
>>
>>
>> On Sunday, February 25, 2024 at 10:44:20 AM UTC-8 Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>> acbe15dcd87 (HEAD -> develop, tag: 10.3.rc0, github/develop) Updated 
>> SageMath version to 10.3.rc0
>> 0fb793fa91a gh-37410: minor fixes in sandpiles
>> 57d4e09af50 gh-37405: links for errors in doc of groups
>> 6030e58afa0 gh-37398: fix `relabel` for permutation groups
>> 5bda2e23eb2 gh-37397: fix some ruff suggestions in cluster_algebra_quiver
>> ccd3f8b852e gh-37385: Remove some last traces of Trac
>> 64b991ab0df gh-37376: src/sage/rings/polynomial: Link to spkg page by 
>> label
>> 

[sage-release] Re: Sage 10.3.rc0 released

[John H Palmieri]

The failing command:

gcc -fno-strict-overflow -Wsign-compare -Wunreachable-code -fno-common 
-dynamic -DNDEBUG -g -O3 -Wall -isysroot 
/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk -g -O2 -g 
-DHAVE_LIBTIFF -DHAVE_LIBJPEG -DHAVE_OPENJPEG -DHAVE_LIBZ -DHAVE_XCB 
-DPILLOW_VERSION=\"10.1.0\" 
-I/opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5 
-I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include 
-I/opt/homebrew/Cellar/libtiff/4.6.0/include 
-I/opt/homebrew/Cellar/zstd/1.5.5/include 
-I/opt/homebrew/Cellar/xz/5.4.6/include 
-I/opt/homebrew/Cellar/freetype/2.13.2/include/freetype2 
-I/opt/homebrew/Cellar/libpng/1.6.42/include/libpng16 
-I/opt/homebrew/Cellar/harfbuzz/8.3.0_1/include/harfbuzz 
-I/opt/homebrew/Cellar/glib/2.78.4/include/glib-2.0 
-I/opt/homebrew/Cellar/glib/2.78.4/lib/glib-2.0/include 
-I/opt/homebrew/Cellar/gettext/0.22.5/include 
-I/opt/homebrew/Cellar/pcre2/10.42/include 
-I/opt/homebrew/Cellar/graphite2/1.3.14/include 
-I/opt/homebrew/Cellar/fribidi/1.0.13/include/fribidi 
-I/opt/homebrew/Cellar/little-cms2/2.16/include 
-I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/include 
-I/opt/homebrew/Cellar/primesieve/12.0/include 
-I/opt/homebrew/Cellar/bdw-gc/8.2.6/include 
-I/opt/homebrew/Cellar/libpng/1.6.42/include 
-I/opt/homebrew/Cellar/ntl/11.5.1/include 
-I/opt/homebrew/Cellar/readline/8.2.10/include -I/opt/homebrew/include 
-I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
 
-I/opt/homebrew/Cellar/freetype/2.13.2/include 
-I/Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/usr/include 
-I/Users/jpalmier/Sage/TESTING/sage-10.3.rc0/local/var/lib/sage/venv-python3.12/include
 
-I/opt/homebrew/opt/python@3.12/Frameworks/Python.framework/Versions/3.12/include/python3.12
 
-c src/libImaging/Jpeg2KDecode.c -o 
build/temp.macosx-14.0-arm64-cpython-312/src/libImaging/Jpeg2KDecode.o

Compared to the previous version (from January): the differences are

- the new version includes -fno-strict-overflow
- the old version includes -fwrapv
- various version numbers have changed, of course


On Wednesday, February 28, 2024 at 2:16:42 PM UTC-8 John H Palmieri wrote:

> OS X, Apple Silicon, with many homebrew packages, including a recently 
> upgraded openjpeg (from 2.5.0 to 2.5.1): pillow is failing to build, with 
> the error message
>
>   src/libImaging/Jpeg2KDecode.c:673:43: error: too few arguments to 
> function call, expected 3, have 2
>   opj_stream_set_user_data(stream, state);
>     ^
>   
> /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5/openjpeg.h:1235:27: 
> note: 'opj_stream_set_user_data' declared here
>   OPJ_API void OPJ_CALLCONV opj_stream_set_user_data(opj_stream_t* 
> p_stream,
> ^
>   1 error generated.
>   error: command '/usr/bin/gcc' failed with exit code 1
>   error: subprocess-exited-with-error
>   
>   × Building wheel for Pillow (pyproject.toml) did not run successfully.
>   │ exit code: 1
>   ╰─> See above for output.
>   
> I'm a little confused about jpeg, though: although this is using 
> openjpeg-2.5.1, Sage's top-level config.log file says
>
> pkg_cv_libjpeg_CFLAGS=-I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
> pkg_cv_libjpeg_LIBS='-L/opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib 
> -ljpeg'
>
> pillow's log file says
>
> Looking for `libjpeg` using pkg-config.
> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib
> Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
> Looking for `libopenjp2` using pkg-config.
> Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/lib
> Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5
>
> This is similar to a log file from a successful build, though.  (I don't 
> know how to attach files from the browser interface to Google groups.)
>
> Suggestions?
>
>
>
>
> On Sunday, February 25, 2024 at 10:44:20 AM UTC-8 Volker Braun wrote:
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> acbe15dcd87 (HEAD -> develop, tag: 10.3.rc0, github/develop) Updated 
> SageMath version to 10.3.rc0
> 0fb793fa91a gh-37410: minor fixes in sandpiles
> 57d4e09af50 gh-37405: links for errors in doc of groups
> 6030e58afa0 gh-37398: fix `relabel` for permutation groups
> 5bda2e23eb2 gh-37397: fix some ruff suggestions in cluster_algebra_quiver
> ccd3f8b852e gh-37385: Remove some last traces of Trac
> 64b991ab0df gh-37376: src/sage/rings/polynomial: Link to spkg page by label
> e01a4380176 gh-37375: Speed up square matrix times vector over GF(2)
> 193e49d6742 gh-37367: improve random sampling of quotient-ring elements
> 702e32f43f9 gh-37366: use Parent in skew polynomials
> 3ffb70a0d5a gh-37360: Fix doctest for `multiplication_by_m`
> f5983a3c510 gh-37355: less usage of method .is_commutative
> 218012299eb gh-37354: Allow 

[sage-release] Re: Sage 10.3.rc0 released

[John H Palmieri]

OS X, Apple Silicon, with many homebrew packages, including a recently 
upgraded openjpeg (from 2.5.0 to 2.5.1): pillow is failing to build, with 
the error message

  src/libImaging/Jpeg2KDecode.c:673:43: error: too few arguments to 
function call, expected 3, have 2
  opj_stream_set_user_data(stream, state);
    ^
  
/opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5/openjpeg.h:1235:27: 
note: 'opj_stream_set_user_data' declared here
  OPJ_API void OPJ_CALLCONV opj_stream_set_user_data(opj_stream_t* p_stream,
^
  1 error generated.
  error: command '/usr/bin/gcc' failed with exit code 1
  error: subprocess-exited-with-error
  
  × Building wheel for Pillow (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> See above for output.
  
I'm a little confused about jpeg, though: although this is using 
openjpeg-2.5.1, Sage's top-level config.log file says

pkg_cv_libjpeg_CFLAGS=-I/opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
pkg_cv_libjpeg_LIBS='-L/opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib -ljpeg'

pillow's log file says

Looking for `libjpeg` using pkg-config.
Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/lib
Appending path /opt/homebrew/Cellar/jpeg-turbo/3.0.1/include
Looking for `libopenjp2` using pkg-config.
Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/lib
Appending path /opt/homebrew/Cellar/openjpeg/2.5.1/include/openjpeg-2.5

This is similar to a log file from a successful build, though.  (I don't 
know how to attach files from the browser interface to Google groups.)

Suggestions?




On Sunday, February 25, 2024 at 10:44:20 AM UTC-8 Volker Braun wrote:

As always, you can get the latest beta version from the "develop" git 
branch. Alternatively, the self-contained source tarball is at 
http://www.sagemath.org/download-latest.html

acbe15dcd87 (HEAD -> develop, tag: 10.3.rc0, github/develop) Updated 
SageMath version to 10.3.rc0
0fb793fa91a gh-37410: minor fixes in sandpiles
57d4e09af50 gh-37405: links for errors in doc of groups
6030e58afa0 gh-37398: fix `relabel` for permutation groups
5bda2e23eb2 gh-37397: fix some ruff suggestions in cluster_algebra_quiver
ccd3f8b852e gh-37385: Remove some last traces of Trac
64b991ab0df gh-37376: src/sage/rings/polynomial: Link to spkg page by label
e01a4380176 gh-37375: Speed up square matrix times vector over GF(2)
193e49d6742 gh-37367: improve random sampling of quotient-ring elements
702e32f43f9 gh-37366: use Parent in skew polynomials
3ffb70a0d5a gh-37360: Fix doctest for `multiplication_by_m`
f5983a3c510 gh-37355: less usage of method .is_commutative
218012299eb gh-37354: Allow submodule construction of a free module over a 
ring
686f7e9a362 gh-37352: `sage --package create`: When re-creating with a 
different source type, clean up
0df697a0a2d gh-37350: `sage -package dependencies`
fba0587aa94 gh-37343: Add simple methods to convert to and from bytes for 
`ZZ` and finite fields
805c1522b87 gh-37342: remove some old deprecations in functional.py
a451b65a356 gh-37341: Avoid algebra in polynomials
57a404ca7ae gh-37339: Removed whitespaces in `ncsym.py`
ec7b486614b gh-37338: Speedup database_matroids.py tests
0f35a6911dc gh-37334: Preparation for Sphinx 7
e2c3fe9998e gh-37333: fixing ruff UP037 (about type annotation)
34de9761f25 gh-37329: add optional order= argument to .log() method for 
PARI finite-field elements
7f85dca6971 gh-37328: remove "known bug" marker for #6413 from doctest
721030b1b1d gh-37324: Basis completion for matrices over univariate 
polynomials
0b38b3eac89 gh-37318: Allowing HeckeAlgebraSymmetricGroupT to accept 
elements of SymmetricGroup(n) as input
f016b015301 gh-37316: use CommutativeRing in ring_extension
e54f7eb5e14 gh-37313: Fix package install instructions in "Numerical Sage" 
tutorial
0e819af60b8 gh-37311: Add tips for choosing an exception in developer guide
c3e76e125c1 gh-37306: Fix random test failures in 
`number_field_element_quadratic`
c1f56258170 gh-37303: use Parent in Weyl algebra
2416d61a12f gh-37302: use Parent instead of Algebra in finite_gca
2e9c5754bd6 gh-37299: use parent in quaternions
49881576723 gh-37286: sagemath-standard: fix manifest
99fd4f42794 gh-37283: Fix RegularSequence.subsequence for zero sequence
9a1a9649f33 gh-37281: details in Zariski-Van-Kampen
c02dfc43a6c gh-37273: large pep8 cleanup in interfaces
044b3aa1638 gh-37268: Allow custom degree in `random_element` of polynomial 
quotient ring
ffa87518e0f gh-37260: extend `all_paths_iterator` and `all_simple_paths` to 
Graph
d4075f1979c gh-37242: Improved algorithm choice for isogeny computation
54307752f5a gh-37231: Use matroid-database package
71f2ef44c96 gh-37227: build/pkgs/ipython/dependencies: Add matplotlib_inline
3eac6ea28db gh-37221: Added the alt nu-tamari lattices
abc70998ef1 gh-37206: Various edits of developer guide
726052b07ab gh-37186: Update debian.txt for various Python packages
bdf8f978a3c gh-37129: Sphinx 

Re: [sage-release] Re: Sage 10.3.rc0 released

[Jaap Spies]

Goedemiddag,

>From the logs/tests.log: see attachment.

Jaap

On Tue, Feb 27, 2024 at 1:01 PM Dima Pasechnik  wrote:

> Goedemiddag Jaap,
>
> would you be so kind to look at logs/tests.log and see where exactly the
> crash occurs (lines before the crash are printed, so it can be put down to
> the exact place it).
> And post the relevant lines of logs/tests.log here.
>
> Dima
>
>
>
> On Tue, Feb 27, 2024 at 11:02 AM Jaap Spies  wrote:
>
>> Operating System: Fedora Linux 39
>>
>> Kernel Version: 6.7.3-200.fc39.x86_64 (64-bit)
>>
>> Processors: 24 × 13th Gen Intel® Core™ i7-13700KF
>> Memory: 31,2 GiB of RAM
>>
>> Same persistent error:
>> Unhandled SIGSEGV: A segmentation fault occurred.
>> This probably occurred because a *compiled* module has a bug
>> in it and is not properly wrapped with sig_on(), sig_off().
>> Python will now terminate.
>> 
>>
>> **
>> --
>> sage -t --long --warn-long 30.7
>> --random-seed=154226370660111014259536820846081862386
>> src/sage/libs/gap/element.pyx  # Killed due to segmentation fault
>>
>> Jaap Spies
>>
>> On Mon, Feb 26, 2024 at 11:09 PM Emmanuel Charpentier <
>> emanuel.charpent...@gmail.com> wrote:
>>
>>> Thanks a lot ! I'll have to ((re-)^n)read the Developer's Guide and the
>>> Installation Guide...
>>>
>>> Le lundi 26 février 2024 à 21:44:27 UTC+1, matthia...@gmail.com a
>>> écrit :
>>>
>>> On Monday, February 26, 2024 at 12:26:04 PM UTC-8 emanuel.c...@gmail.com
>>> wrote:
>>>
>>> Question : how to modify Sage’s configuration (as used by make
>>> reconfigure) without having to re-state *all* the configuration ?
>>>
>>> eval ./configure $(./config.status --config) --without-system-brial
>>>
>>> --
>>> You received this message because you are subscribed to the Google
>>> Groups "sage-release" group.
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>>> 
>>> .
>>>
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>> 
>> .
>>
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### make ptestlong: Running ./sage -t --logfile=logs/test.log --long -p --optional=sage,optional --all
Running doctests with ID 2024-02-26-18-29-31-e3c9de68.
Git branch: develop
Git ref: 10.3.rc0
Running with SAGE_LOCAL='/home/jaap/sagemath/sage-10.3.rc0/local' and SAGE_VENV='/home/jaap/sagemath/sage-10.3.rc0/local/var/lib/sage/venv-python3.12'
Using --optional=fedora,pip,sage,sage_spkg
Features to be detected: 

Re: [sage-release] Re: Sage 10.3.rc0 released

[Dima Pasechnik]

Goedemiddag Jaap,

would you be so kind to look at logs/tests.log and see where exactly the
crash occurs (lines before the crash are printed, so it can be put down to
the exact place it).
And post the relevant lines of logs/tests.log here.

Dima



On Tue, Feb 27, 2024 at 11:02 AM Jaap Spies  wrote:

> Operating System: Fedora Linux 39
>
> Kernel Version: 6.7.3-200.fc39.x86_64 (64-bit)
>
> Processors: 24 × 13th Gen Intel® Core™ i7-13700KF
> Memory: 31,2 GiB of RAM
>
> Same persistent error:
> Unhandled SIGSEGV: A segmentation fault occurred.
> This probably occurred because a *compiled* module has a bug
> in it and is not properly wrapped with sig_on(), sig_off().
> Python will now terminate.
> 
>
> **
> --
> sage -t --long --warn-long 30.7
> --random-seed=154226370660111014259536820846081862386
> src/sage/libs/gap/element.pyx  # Killed due to segmentation fault
>
> Jaap Spies
>
> On Mon, Feb 26, 2024 at 11:09 PM Emmanuel Charpentier <
> emanuel.charpent...@gmail.com> wrote:
>
>> Thanks a lot ! I'll have to ((re-)^n)read the Developer's Guide and the
>> Installation Guide...
>>
>> Le lundi 26 février 2024 à 21:44:27 UTC+1, matthia...@gmail.com a écrit :
>>
>> On Monday, February 26, 2024 at 12:26:04 PM UTC-8 emanuel.c...@gmail.com
>> wrote:
>>
>> Question : how to modify Sage’s configuration (as used by make
>> reconfigure) without having to re-state *all* the configuration ?
>>
>> eval ./configure $(./config.status --config) --without-system-brial
>>
>> --
>> You received this message because you are subscribed to the Google Groups
>> "sage-release" group.
>> To unsubscribe from this group and stop receiving emails from it, send an
>> email to sage-release+unsubscr...@googlegroups.com.
>> To view this discussion on the web visit
>> https://groups.google.com/d/msgid/sage-release/744757ca-0e2d-4e55-9ac8-ee01672b6889n%40googlegroups.com
>> 
>> .
>>
> --
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> 
> .
>

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Re: [sage-release] Re: Sage 10.3.rc0 released

[Jaap Spies]

Operating System: Fedora Linux 39

Kernel Version: 6.7.3-200.fc39.x86_64 (64-bit)

Processors: 24 × 13th Gen Intel® Core™ i7-13700KF
Memory: 31,2 GiB of RAM

Same persistent error:
Unhandled SIGSEGV: A segmentation fault occurred.
This probably occurred because a *compiled* module has a bug
in it and is not properly wrapped with sig_on(), sig_off().
Python will now terminate.


**
--
sage -t --long --warn-long 30.7
--random-seed=154226370660111014259536820846081862386
src/sage/libs/gap/element.pyx  # Killed due to segmentation fault

Jaap Spies

On Mon, Feb 26, 2024 at 11:09 PM Emmanuel Charpentier <
emanuel.charpent...@gmail.com> wrote:

> Thanks a lot ! I'll have to ((re-)^n)read the Developer's Guide and the
> Installation Guide...
>
> Le lundi 26 février 2024 à 21:44:27 UTC+1, matthia...@gmail.com a écrit :
>
> On Monday, February 26, 2024 at 12:26:04 PM UTC-8 emanuel.c...@gmail.com
> wrote:
>
> Question : how to modify Sage’s configuration (as used by make reconfigure)
> without having to re-state *all* the configuration ?
>
> eval ./configure $(./config.status --config) --without-system-brial
>
> --
> You received this message because you are subscribed to the Google Groups
> "sage-release" group.
> To unsubscribe from this group and stop receiving emails from it, send an
> email to sage-release+unsubscr...@googlegroups.com.
> To view this discussion on the web visit
> https://groups.google.com/d/msgid/sage-release/744757ca-0e2d-4e55-9ac8-ee01672b6889n%40googlegroups.com
> 
> .
>

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[sage-release] Re: Sage 10.3.rc0 released

[Emmanuel Charpentier]

Thanks a lot ! I'll have to ((re-)^n)read the Developer's Guide and the 
Installation Guide...

Le lundi 26 février 2024 à 21:44:27 UTC+1, matthia...@gmail.com a écrit :

On Monday, February 26, 2024 at 12:26:04 PM UTC-8 emanuel.c...@gmail.com 
wrote:

Question : how to modify Sage’s configuration (as used by make reconfigure) 
without having to re-state *all* the configuration ?

eval ./configure $(./config.status --config) --without-system-brial

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[sage-release] Re: Sage 10.3.rc0 released

[Matthias Köppe]

On Monday, February 26, 2024 at 12:26:04 PM UTC-8 emanuel.c...@gmail.com 
wrote:

Question : how to modify Sage’s configuration (as used by make reconfigure) 
without having to re-state *all* the configuration ?

eval ./configure $(./config.status --config) --without-system-brial

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[sage-release] Re: Sage 10.3.rc0 released

[Emmanuel Charpentier]

On Debian testing running on core i7 + 16 GB RAM, upgrading 10.3.beta8 to 
10.3.rc0 initially failed ; deleting and rebuilding the documentation 
succeeded. Running ptestlong initially raised the seven polybori-related 
failures already reported 
. 
Following Antonio Rojas’ suggestion 
, I 
forced the installation of Sage’s brial (by sage -i brial). Then, these 
tests passed.

Question : how to modify Sage’s configuration (as used by make reconfigure) 
withit having to re-state *all* the configuration ?

HTH,
​
Le dimanche 25 février 2024 à 19:44:20 UTC+1, Volker Braun a écrit :

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> acbe15dcd87 (HEAD -> develop, tag: 10.3.rc0, github/develop) Updated 
> SageMath version to 10.3.rc0
> 0fb793fa91a gh-37410: minor fixes in sandpiles
> 57d4e09af50 gh-37405: links for errors in doc of groups
> 6030e58afa0 gh-37398: fix `relabel` for permutation groups
> 5bda2e23eb2 gh-37397: fix some ruff suggestions in cluster_algebra_quiver
> ccd3f8b852e gh-37385: Remove some last traces of Trac
> 64b991ab0df gh-37376: src/sage/rings/polynomial: Link to spkg page by label
> e01a4380176 gh-37375: Speed up square matrix times vector over GF(2)
> 193e49d6742 gh-37367: improve random sampling of quotient-ring elements
> 702e32f43f9 gh-37366: use Parent in skew polynomials
> 3ffb70a0d5a gh-37360: Fix doctest for `multiplication_by_m`
> f5983a3c510 gh-37355: less usage of method .is_commutative
> 218012299eb gh-37354: Allow submodule construction of a free module over a 
> ring
> 686f7e9a362 gh-37352: `sage --package create`: When re-creating with a 
> different source type, clean up
> 0df697a0a2d gh-37350: `sage -package dependencies`
> fba0587aa94 gh-37343: Add simple methods to convert to and from bytes for 
> `ZZ` and finite fields
> 805c1522b87 gh-37342: remove some old deprecations in functional.py
> a451b65a356 gh-37341: Avoid algebra in polynomials
> 57a404ca7ae gh-37339: Removed whitespaces in `ncsym.py`
> ec7b486614b gh-37338: Speedup database_matroids.py tests
> 0f35a6911dc gh-37334: Preparation for Sphinx 7
> e2c3fe9998e gh-37333: fixing ruff UP037 (about type annotation)
> 34de9761f25 gh-37329: add optional order= argument to .log() method for 
> PARI finite-field elements
> 7f85dca6971 gh-37328: remove "known bug" marker for #6413 from doctest
> 721030b1b1d gh-37324: Basis completion for matrices over univariate 
> polynomials
> 0b38b3eac89 gh-37318: Allowing HeckeAlgebraSymmetricGroupT to accept 
> elements of SymmetricGroup(n) as input
> f016b015301 gh-37316: use CommutativeRing in ring_extension
> e54f7eb5e14 gh-37313: Fix package install instructions in "Numerical Sage" 
> tutorial
> 0e819af60b8 gh-37311: Add tips for choosing an exception in developer guide
> c3e76e125c1 gh-37306: Fix random test failures in 
> `number_field_element_quadratic`
> c1f56258170 gh-37303: use Parent in Weyl algebra
> 2416d61a12f gh-37302: use Parent instead of Algebra in finite_gca
> 2e9c5754bd6 gh-37299: use parent in quaternions
> 49881576723 gh-37286: sagemath-standard: fix manifest
> 99fd4f42794 gh-37283: Fix RegularSequence.subsequence for zero sequence
> 9a1a9649f33 gh-37281: details in Zariski-Van-Kampen
> c02dfc43a6c gh-37273: large pep8 cleanup in interfaces
> 044b3aa1638 gh-37268: Allow custom degree in `random_element` of 
> polynomial quotient ring
> ffa87518e0f gh-37260: extend `all_paths_iterator` and `all_simple_paths` 
> to Graph
> d4075f1979c gh-37242: Improved algorithm choice for isogeny computation
> 54307752f5a gh-37231: Use matroid-database package
> 71f2ef44c96 gh-37227: build/pkgs/ipython/dependencies: Add 
> matplotlib_inline
> 3eac6ea28db gh-37221: Added the alt nu-tamari lattices
> abc70998ef1 gh-37206: Various edits of developer guide
> 726052b07ab gh-37186: Update debian.txt for various Python packages
> bdf8f978a3c gh-37129: Sphinx 7
> efd42e5ab18 gh-37089: Implemented order computation and identity checking 
> for automorphisms of elliptic curves
> e7037f3a005 gh-36988: Adding support for sums, intersection, and equality 
> of SubmodulesWithBasis
> eabd2bf80bc gh-36694: CI conda: On `pull_request`, only run 1 macOS job 
> and 1 Linux job
> 4937796a77c gh-36602: Tidy PR template
> 34e561800a8 gh-36587: Created functions to generate random k-tree and 
> partial k-tree graphs
> be3a1163b69 gh-35103: SCIPBackend: Faster copy, remove_constraint methods
> 30b3d78fac8 (tag: 10.3.beta8) Updated SageMath version to 10.3.beta8
>

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