Re: [sage-release] Re: Sage 8.5.beta0 released

2018-10-25 Thread François Bissey
I am still on texlive 2017 so it definitely could be an issue.

> On 26/10/2018, at 11:31, John H Palmieri  wrote:
> 
> I've seen it in the graphs portion of the reference manual, in particular the 
> file graph.py. In the error I posted before, it is coming from combinat, in 
> particular combinat/crystals/tensor_product.py:
> 
> .. SEEALSO::
> 
> :mod:`sage.combinat.crystals.crystals` for general help on
> crystals, and in particular plotting and `\LaTeX` output.
> 
> But there are lots of instances in docstrings of the string "`\LaTeX`", and I 
> can't believe that those are new in recent versions of Sage. Could it depend 
> on the version of pdflatex being used? I am seeing this on two different 
> computers, both OS X, one 10.13, one 10.14, both running pdfTeX version 
> 3.14159265-2.6-1.40.19 (TeX Live 2018).
> 
> If I comment out \usepackage{babel} and some lines related to that package, 
> it builds, so it appears to be a conflict with the babel package. My version 
> is "2018/10/16 3.26". I've opened https://trac.sagemath.org/ticket/26558 for 
> this.
> 
>   John
> 
> 
> 
> On Thursday, October 25, 2018 at 2:33:09 PM UTC-7, François Bissey wrote:
> I cannot see that. Which file is affected? 
> 
> François 
> 
> > On 26/10/2018, at 09:34, John H Palmieri  wrote: 
> > 
> > 
> > 
> > On Thursday, October 25, 2018 at 1:30:30 PM UTC-7, John H Palmieri wrote: 
> > PDF docs fail to build for me: 
> > 
> > [docpdf] LaTeX Warning: Command \LaTeX invalid in math mode on input line 
> > 44737. 
> > [docpdf] 
> > [docpdf] 
> > [docpdf] LaTeX Warning: Command \TeX invalid in math mode on input line 
> > 44737. 
> > [docpdf] 
> > [docpdf] ! You can't use `\spacefactor' in math mode. 
> > [docpdf] \@->\spacefactor 
> > [docpdf]  \@m {} 
> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
> > [docpdf]   \) output. 
> > [docpdf] ? 
> > [docpdf] ! Emergency stop. 
> > [docpdf] \@->\spacefactor 
> > [docpdf]  \@m {} 
> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
> > [docpdf]   \) output. 
> > 
> > I'm a little puzzled by this because we have had `\LaTeX` in our source 
> > code for a while, right? Is this causing problems for anyone else? 
> > 
> > $ pdflatex --version 
> > pdfTeX 3.14159265-2.6-1.40.19 (TeX Live 2018) 
> > 
> >   John 
> > 
> > By the way, there was a similar problem 5 years ago: 
> > https://trac.sagemath.org/ticket/16153 
> > 
> >   
> > 
> > 
> > On Saturday, October 20, 2018 at 3:46:52 PM UTC-7, Volker Braun wrote: 
> > As always, you can get the latest beta version from the "develop" git 
> > branch. Alternatively, the self-contained source tarball is at 
> > http://www.sagemath.org/download-latest.html 
> > 
> > 
> > a0a5f5992b (tag: 8.5.beta0, trac/develop) Updated SageMath version to 
> > 8.5.beta0 
> > b9222fdd29 Trac #26500: Add is_derangements method to Permutation 
> > 2dd4022b68 Trac #26464: some cleanup in fan.py 
> > db47d3d61b Trac #26461: adding new Catalan semilattices 
> > 4d560d8816 Trac #26415: py3: use sage_getargspec more consistently 
> > f1b425065b Trac #26175: another typo ticket (2018-09) 
> > 6eec37ddd4 Trac #26099: trim lattices 
> > f0981653db Trac #25270: Add option to only run short doctests 
> > 205c4fb1d5 Trac #26502: failing optional internet doctests in 
> > sage/combinat/designs 
> > b0b1578869 Trac #26494: faster f-polynomial and zeta-polynomial for posets 
> > e93130960a Trac #26493: element_pari_ffelt: use PARI clones instead of 
> > deepcopy_to_python_heap() 
> > 2335e0cbf8 Trac #26488: Remove one usage of SAGE_ROOT in doctests 
> > 171909a527 Trac #26486: clean distances_all_pairs.pyx 
> > de42c3e7f9 Trac #26485: clean genus.pyx 
> > ec6372f055 Trac #26484: clean graph_coloring.py 
> > 9978e85d92 Trac #26483: clean graph_database.py 
> > d8fdcc6b40 Trac #26477: remove deprecated stuff in polynomial_element 
> > 2fbf0a8811 Trac #26476: refine the category of Symmetric groups 
> > faafb175f7 Trac #26469: avoid sorting vertex labels in graph_plot.py 
> > f54d861f11 Trac #26431: py3: not sorting vertices on some graph functions 
> > a05841290a Trac #26475: py3: make all tests in manifolds passed 
> > 2b14ffc744 Trac #26473: py3: fix doctests failures of 
> > sage/combinat/words/word_*datatype* 
> > c928023e3d Trac #26467: clean hypergraph_generators.py 
> > 9a0815d6cf Trac #26466: Py3: Fix DeprecationWarning: generator X raised 
> > StopIteration 
> > 0a2e9748fc Trac #26465: remove deprecated stuff in polyhedron/plot 
> > d5d317fb3d Trac #26463: gen_to_sage: make imports global 
> > 1f7f4e6d99 Trac #26458: Py3: Fix DeprecationWarning: generator X raised 
> > StopIteration for combinat/words 
> > 91cd66d5ad Trac #26456: remove deprecated zero_element 
> > 482abec8e9 Trac #26455: remove deprecated call method for symbolic matrices 
> > 615904148f Trac #26452: cartesian products of 

Re: [sage-release] Re: Sage 8.5.beta0 released

2018-10-25 Thread John H Palmieri


On Thursday, October 25, 2018 at 3:31:51 PM UTC-7, John H Palmieri wrote:
>
> I've seen it in the graphs portion of the reference manual, in particular 
> the file graph.py. In the error I posted before, it is coming from 
> combinat, in particular combinat/crystals/tensor_product.py:
>
> .. SEEALSO::
>
> :mod:`sage.combinat.crystals.crystals` for general help on
> crystals, and in particular plotting and `\LaTeX` output.
>
> But there are lots of instances in docstrings of the string "`\LaTeX`", 
> and I can't believe that those are new in recent versions of Sage. Could it 
> depend on the version of pdflatex being used? I am seeing this on two 
> different computers, both OS X, one 10.13, one 10.14, both running pdfTeX 
> version 3.14159265-2.6-1.40.19 (TeX Live 2018).
>
> If I comment out \usepackage{babel} and some lines related to that 
> package, it builds, so it appears to be a conflict with the babel package. 
> My version is "2018/10/16 3.26". I've opened 
> https://trac.sagemath.org/ticket/26558 for this.
>

To be clear: I mean a conflict with the LaTeX package babel.sty, not the 
Sage/python Babel package.
 

>
>   John
>
>
>
> On Thursday, October 25, 2018 at 2:33:09 PM UTC-7, François Bissey wrote:
>>
>> I cannot see that. Which file is affected? 
>>
>> François 
>>
>> > On 26/10/2018, at 09:34, John H Palmieri  wrote: 
>> > 
>> > 
>> > 
>> > On Thursday, October 25, 2018 at 1:30:30 PM UTC-7, John H Palmieri 
>> wrote: 
>> > PDF docs fail to build for me: 
>> > 
>> > [docpdf] LaTeX Warning: Command \LaTeX invalid in math mode on input 
>> line 44737. 
>> > [docpdf] 
>> > [docpdf] 
>> > [docpdf] LaTeX Warning: Command \TeX invalid in math mode on input line 
>> 44737. 
>> > [docpdf] 
>> > [docpdf] ! You can't use `\spacefactor' in math mode. 
>> > [docpdf] \@->\spacefactor 
>> > [docpdf]  \@m {} 
>> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
>> > [docpdf]   \) output. 
>> > [docpdf] ? 
>> > [docpdf] ! Emergency stop. 
>> > [docpdf] \@->\spacefactor 
>> > [docpdf]  \@m {} 
>> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
>> > [docpdf]   \) output. 
>> > 
>> > I'm a little puzzled by this because we have had `\LaTeX` in our source 
>> code for a while, right? Is this causing problems for anyone else? 
>> > 
>> > $ pdflatex --version 
>> > pdfTeX 3.14159265-2.6-1.40.19 (TeX Live 2018) 
>> > 
>> >   John 
>> > 
>> > By the way, there was a similar problem 5 years ago: 
>> https://trac.sagemath.org/ticket/16153 
>> > 
>> >   
>> > 
>> > 
>> > On Saturday, October 20, 2018 at 3:46:52 PM UTC-7, Volker Braun wrote: 
>> > As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>> > 
>> > 
>> > a0a5f5992b (tag: 8.5.beta0, trac/develop) Updated SageMath version to 
>> 8.5.beta0 
>> > b9222fdd29 Trac #26500: Add is_derangements method to Permutation 
>> > 2dd4022b68 Trac #26464: some cleanup in fan.py 
>> > db47d3d61b Trac #26461: adding new Catalan semilattices 
>> > 4d560d8816 Trac #26415: py3: use sage_getargspec more consistently 
>> > f1b425065b Trac #26175: another typo ticket (2018-09) 
>> > 6eec37ddd4 Trac #26099: trim lattices 
>> > f0981653db Trac #25270: Add option to only run short doctests 
>> > 205c4fb1d5 Trac #26502: failing optional internet doctests in 
>> sage/combinat/designs 
>> > b0b1578869 Trac #26494: faster f-polynomial and zeta-polynomial for 
>> posets 
>> > e93130960a Trac #26493: element_pari_ffelt: use PARI clones instead of 
>> deepcopy_to_python_heap() 
>> > 2335e0cbf8 Trac #26488: Remove one usage of SAGE_ROOT in doctests 
>> > 171909a527 Trac #26486: clean distances_all_pairs.pyx 
>> > de42c3e7f9 Trac #26485: clean genus.pyx 
>> > ec6372f055 Trac #26484: clean graph_coloring.py 
>> > 9978e85d92 Trac #26483: clean graph_database.py 
>> > d8fdcc6b40 Trac #26477: remove deprecated stuff in polynomial_element 
>> > 2fbf0a8811 Trac #26476: refine the category of Symmetric groups 
>> > faafb175f7 Trac #26469: avoid sorting vertex labels in graph_plot.py 
>> > f54d861f11 Trac #26431: py3: not sorting vertices on some graph 
>> functions 
>> > a05841290a Trac #26475: py3: make all tests in manifolds passed 
>> > 2b14ffc744 Trac #26473: py3: fix doctests failures of 
>> sage/combinat/words/word_*datatype* 
>> > c928023e3d Trac #26467: clean hypergraph_generators.py 
>> > 9a0815d6cf Trac #26466: Py3: Fix DeprecationWarning: generator X raised 
>> StopIteration 
>> > 0a2e9748fc Trac #26465: remove deprecated stuff in polyhedron/plot 
>> > d5d317fb3d Trac #26463: gen_to_sage: make imports global 
>> > 1f7f4e6d99 Trac #26458: Py3: Fix DeprecationWarning: generator X raised 
>> StopIteration for combinat/words 
>> > 91cd66d5ad Trac #26456: remove deprecated zero_element 
>> 

Re: [sage-release] Re: Sage 8.5.beta0 released

2018-10-25 Thread John H Palmieri
I've seen it in the graphs portion of the reference manual, in particular 
the file graph.py. In the error I posted before, it is coming from 
combinat, in particular combinat/crystals/tensor_product.py:

.. SEEALSO::

:mod:`sage.combinat.crystals.crystals` for general help on
crystals, and in particular plotting and `\LaTeX` output.

But there are lots of instances in docstrings of the string "`\LaTeX`", and 
I can't believe that those are new in recent versions of Sage. Could it 
depend on the version of pdflatex being used? I am seeing this on two 
different computers, both OS X, one 10.13, one 10.14, both running pdfTeX 
version 3.14159265-2.6-1.40.19 (TeX Live 2018).

If I comment out \usepackage{babel} and some lines related to that package, 
it builds, so it appears to be a conflict with the babel package. My 
version is "2018/10/16 3.26". I've opened 
https://trac.sagemath.org/ticket/26558 for this.

  John



On Thursday, October 25, 2018 at 2:33:09 PM UTC-7, François Bissey wrote:
>
> I cannot see that. Which file is affected? 
>
> François 
>
> > On 26/10/2018, at 09:34, John H Palmieri  > wrote: 
> > 
> > 
> > 
> > On Thursday, October 25, 2018 at 1:30:30 PM UTC-7, John H Palmieri 
> wrote: 
> > PDF docs fail to build for me: 
> > 
> > [docpdf] LaTeX Warning: Command \LaTeX invalid in math mode on input 
> line 44737. 
> > [docpdf] 
> > [docpdf] 
> > [docpdf] LaTeX Warning: Command \TeX invalid in math mode on input line 
> 44737. 
> > [docpdf] 
> > [docpdf] ! You can't use `\spacefactor' in math mode. 
> > [docpdf] \@->\spacefactor 
> > [docpdf]  \@m {} 
> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
> > [docpdf]   \) output. 
> > [docpdf] ? 
> > [docpdf] ! Emergency stop. 
> > [docpdf] \@->\spacefactor 
> > [docpdf]  \@m {} 
> > [docpdf] l.44737 ...and in particular plotting and \(\LaTeX 
> > [docpdf]   \) output. 
> > 
> > I'm a little puzzled by this because we have had `\LaTeX` in our source 
> code for a while, right? Is this causing problems for anyone else? 
> > 
> > $ pdflatex --version 
> > pdfTeX 3.14159265-2.6-1.40.19 (TeX Live 2018) 
> > 
> >   John 
> > 
> > By the way, there was a similar problem 5 years ago: 
> https://trac.sagemath.org/ticket/16153 
> > 
> >   
> > 
> > 
> > On Saturday, October 20, 2018 at 3:46:52 PM UTC-7, Volker Braun wrote: 
> > As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
> > 
> > 
> > a0a5f5992b (tag: 8.5.beta0, trac/develop) Updated SageMath version to 
> 8.5.beta0 
> > b9222fdd29 Trac #26500: Add is_derangements method to Permutation 
> > 2dd4022b68 Trac #26464: some cleanup in fan.py 
> > db47d3d61b Trac #26461: adding new Catalan semilattices 
> > 4d560d8816 Trac #26415: py3: use sage_getargspec more consistently 
> > f1b425065b Trac #26175: another typo ticket (2018-09) 
> > 6eec37ddd4 Trac #26099: trim lattices 
> > f0981653db Trac #25270: Add option to only run short doctests 
> > 205c4fb1d5 Trac #26502: failing optional internet doctests in 
> sage/combinat/designs 
> > b0b1578869 Trac #26494: faster f-polynomial and zeta-polynomial for 
> posets 
> > e93130960a Trac #26493: element_pari_ffelt: use PARI clones instead of 
> deepcopy_to_python_heap() 
> > 2335e0cbf8 Trac #26488: Remove one usage of SAGE_ROOT in doctests 
> > 171909a527 Trac #26486: clean distances_all_pairs.pyx 
> > de42c3e7f9 Trac #26485: clean genus.pyx 
> > ec6372f055 Trac #26484: clean graph_coloring.py 
> > 9978e85d92 Trac #26483: clean graph_database.py 
> > d8fdcc6b40 Trac #26477: remove deprecated stuff in polynomial_element 
> > 2fbf0a8811 Trac #26476: refine the category of Symmetric groups 
> > faafb175f7 Trac #26469: avoid sorting vertex labels in graph_plot.py 
> > f54d861f11 Trac #26431: py3: not sorting vertices on some graph 
> functions 
> > a05841290a Trac #26475: py3: make all tests in manifolds passed 
> > 2b14ffc744 Trac #26473: py3: fix doctests failures of 
> sage/combinat/words/word_*datatype* 
> > c928023e3d Trac #26467: clean hypergraph_generators.py 
> > 9a0815d6cf Trac #26466: Py3: Fix DeprecationWarning: generator X raised 
> StopIteration 
> > 0a2e9748fc Trac #26465: remove deprecated stuff in polyhedron/plot 
> > d5d317fb3d Trac #26463: gen_to_sage: make imports global 
> > 1f7f4e6d99 Trac #26458: Py3: Fix DeprecationWarning: generator X raised 
> StopIteration for combinat/words 
> > 91cd66d5ad Trac #26456: remove deprecated zero_element 
> > 482abec8e9 Trac #26455: remove deprecated call method for symbolic 
> matrices 
> > 615904148f Trac #26452: cartesian products of MonomialGrowthGroup 
> related to number fields 
> > 22c1d92fe7 Trac #26448: clean hyperbolicity.pyx 
> > 75808093e3 Trac #26447: py3: do not sort vertices in static graphs 
> > 

Re: [sage-release] Re: Sage 8.5.beta0 released

2018-10-25 Thread François Bissey
I cannot see that. Which file is affected?

François

> On 26/10/2018, at 09:34, John H Palmieri  wrote:
> 
> 
> 
> On Thursday, October 25, 2018 at 1:30:30 PM UTC-7, John H Palmieri wrote:
> PDF docs fail to build for me:
> 
> [docpdf] LaTeX Warning: Command \LaTeX invalid in math mode on input line 
> 44737.
> [docpdf] 
> [docpdf] 
> [docpdf] LaTeX Warning: Command \TeX invalid in math mode on input line 44737.
> [docpdf] 
> [docpdf] ! You can't use `\spacefactor' in math mode.
> [docpdf] \@->\spacefactor 
> [docpdf]  \@m {}
> [docpdf] l.44737 ...and in particular plotting and \(\LaTeX
> [docpdf]   \) output.
> [docpdf] ? 
> [docpdf] ! Emergency stop.
> [docpdf] \@->\spacefactor 
> [docpdf]  \@m {}
> [docpdf] l.44737 ...and in particular plotting and \(\LaTeX
> [docpdf]   \) output.
> 
> I'm a little puzzled by this because we have had `\LaTeX` in our source code 
> for a while, right? Is this causing problems for anyone else?
> 
> $ pdflatex --version
> pdfTeX 3.14159265-2.6-1.40.19 (TeX Live 2018)
> 
>   John
> 
> By the way, there was a similar problem 5 years ago: 
> https://trac.sagemath.org/ticket/16153
> 
>  
> 
> 
> On Saturday, October 20, 2018 at 3:46:52 PM UTC-7, Volker Braun wrote:
> As always, you can get the latest beta version from the "develop" git branch. 
> Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
> 
> 
> a0a5f5992b (tag: 8.5.beta0, trac/develop) Updated SageMath version to 
> 8.5.beta0
> b9222fdd29 Trac #26500: Add is_derangements method to Permutation
> 2dd4022b68 Trac #26464: some cleanup in fan.py
> db47d3d61b Trac #26461: adding new Catalan semilattices
> 4d560d8816 Trac #26415: py3: use sage_getargspec more consistently
> f1b425065b Trac #26175: another typo ticket (2018-09)
> 6eec37ddd4 Trac #26099: trim lattices
> f0981653db Trac #25270: Add option to only run short doctests
> 205c4fb1d5 Trac #26502: failing optional internet doctests in 
> sage/combinat/designs
> b0b1578869 Trac #26494: faster f-polynomial and zeta-polynomial for posets
> e93130960a Trac #26493: element_pari_ffelt: use PARI clones instead of 
> deepcopy_to_python_heap()
> 2335e0cbf8 Trac #26488: Remove one usage of SAGE_ROOT in doctests
> 171909a527 Trac #26486: clean distances_all_pairs.pyx
> de42c3e7f9 Trac #26485: clean genus.pyx
> ec6372f055 Trac #26484: clean graph_coloring.py
> 9978e85d92 Trac #26483: clean graph_database.py
> d8fdcc6b40 Trac #26477: remove deprecated stuff in polynomial_element
> 2fbf0a8811 Trac #26476: refine the category of Symmetric groups
> faafb175f7 Trac #26469: avoid sorting vertex labels in graph_plot.py
> f54d861f11 Trac #26431: py3: not sorting vertices on some graph functions
> a05841290a Trac #26475: py3: make all tests in manifolds passed
> 2b14ffc744 Trac #26473: py3: fix doctests failures of 
> sage/combinat/words/word_*datatype*
> c928023e3d Trac #26467: clean hypergraph_generators.py
> 9a0815d6cf Trac #26466: Py3: Fix DeprecationWarning: generator X raised 
> StopIteration
> 0a2e9748fc Trac #26465: remove deprecated stuff in polyhedron/plot
> d5d317fb3d Trac #26463: gen_to_sage: make imports global
> 1f7f4e6d99 Trac #26458: Py3: Fix DeprecationWarning: generator X raised 
> StopIteration for combinat/words
> 91cd66d5ad Trac #26456: remove deprecated zero_element
> 482abec8e9 Trac #26455: remove deprecated call method for symbolic matrices
> 615904148f Trac #26452: cartesian products of MonomialGrowthGroup related to 
> number fields
> 22c1d92fe7 Trac #26448: clean hyperbolicity.pyx
> 75808093e3 Trac #26447: py3: do not sort vertices in static graphs
> f18560e853 Trac #26444: Use maximal cliques iterator for line graph
> 30649e2336 Trac #26439: clean matchpoly.pyx
> dcd7851c62 Trac #26437: clean partial_cube.py
> f936bdfe8c Trac #26436: Force input of affine permutation groups to be 
> elements of ZZ
> 391c379af3 Trac #26435: polytopes.simplex: Add base_ring keyword, allow exact 
> computation with project=True
> 7a3157fe59 Trac #26433: Slowness in generic quo_rem
> 519c614dde Trac #26432: clean graph.py
> 72764911e6 Trac #26430: py3: fix some doctests in combinat/designs
> aba56d7e8e Trac #26428: improve is_weakly_chordal
> 23587340f6 Trac #26427: add doctest to charpoly method of symbolic matrices
> cccd38873b Trac #26424: Bugs in inverses of Yokonuma-Hecke algebras
> bffe63cbde Trac #26419: py3: fix hash for trees
> 88db09e866 Trac #26418: py3: fix int argument check in 
> Matrix_integer_dense.__pow__
> 46217e165c Trac #26417: py3: more robust doctests in one thematic tutorial
> c6fe9ebcc0 Trac #26389: Listing meataxe matrices with zero rows is broken
> 0111e2a65d Trac #23432: Type debugger
> 3d76c5311a Trac #26414: Various fixes to rational_power_parts()
> ce4871d65b Trac #26400: py3 fix all doctests in groups/matrix_gps
> fb09bfa711 Trac #26396: Upgrade to cypari2-1.3.1
> 

[sage-release] Re: Sage 8.5.beta0 released

2018-10-24 Thread Eric Gourgoulhon
On Ubuntu 18.04 running on Intel Core i7-6700HQ + 16 GB RAM, incremental 
build OK (-j8) and all tests from ptestlong passed.

Eric.

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