[sage-release] Re: Sage 9.3.rc2 released

[Emmanuel Charpentier]

FWIW, on Debian testing, once solved the above problem of upgrading from 
`9.3.rc0` to 9.3.rc2`, thanks to Matthias, ptestlong gave exactly the same 
results as for the last two previous releases : one timeout (parigp.py), 
one cosmetic bug (gap_packages.py), one real bug (division by zero in 
abelian_group_gap.py).


HTH,


Le samedi 10 avril 2021 à 22:23:53 UTC+2, Emmanuel Charpentier a écrit :

> On Debian testing, upgrading from 9.3.rc0 to 9.3.rc2 fails at 
> documentation building. From install.log :
>
> make[3]: rien à faire pour « all-sage ».
> [dochtml] Traceback (most recent call last):
> [dochtml]   File "/usr/lib/python3.9/runpy.py", line 188, in 
> _run_module_as_main
> [dochtml] mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
> [dochtml]   File "/usr/lib/python3.9/runpy.py", line 147, in 
> _get_module_details
> [dochtml] return _get_module_details(pkg_main_name, error)
> [dochtml]   File "/usr/lib/python3.9/runpy.py", line 111, in 
> _get_module_details
> [dochtml] __import__(pkg_name)
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage_docbuild/__init__.py",
>  line 57, in 
> [dochtml] import sage.all
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/all.py", line 142, 
> in 
> [dochtml] from sage.rings.all  import *
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/all.py", line 
> 83, in 
> [dochtml] from .polynomial.all import *
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/polynomial/all.py",
>  line 42, in 
> [dochtml] from sage.rings.polynomial.laurent_polynomial_ring import 
> LaurentPolynomialRing
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/polynomial/laurent_polynomial_ring.py",
>  line 50, in 
> [dochtml] from sage.rings.polynomial.laurent_polynomial import 
> LaurentPolynomial_mpair, LaurentPolynomial_univariate
> [dochtml]   File "sage/rings/polynomial/laurent_polynomial.pyx", line 1, in 
> init sage.rings.polynomial.laurent_polynomial 
> (build/cythonized/sage/rings/polynomial/laurent_polynomial.c:40841)
> [dochtml]   File "sage/matrix/matrix0.pyx", line 28, in init 
> sage.matrix.matrix0 (build/cythonized/sage/matrix/matrix0.c:44271)
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/modules/free_module.py",
>  line 167, in 
> [dochtml] import sage.matrix.matrix_space
> [dochtml]   File 
> "/usr/local/sage-9/local/lib/python3.9/site-packages/sage/matrix/matrix_space.py",
>  line 55, in 
> [dochtml] from . import matrix_mpolynomial_dense
> [dochtml]   File "sage/matrix/matrix_mpolynomial_dense.pyx", line 1, in init 
> sage.matrix.matrix_mpolynomial_dense 
> (build/cythonized/sage/matrix/matrix_mpolynomial_dense.cpp:8652)
> [dochtml] ImportError: libSingular-4.2.0p1+2021-03-13+sage.so: cannot open 
> shared object file: No such file or directory
> make[3]: *** [Makefile:2280 : doc-html] Erreur 1
> make[2]: *** [Makefile:2160 : all-start] Erreur 2
> make[2] : on quitte le répertoire « /usr/local/sage-9/build/make »
>
> However :
>
> charpent@zen-book-flip:/usr/local/sage-9$ ls -l local/lib/libSingular*
> -rwxr-xr-x 1 charpent charpent 4618600 10 avril 21:18 
> local/lib/libSingular-4.2.0p1+2021-03-24+sage-2.so
> lrwxrwxrwx 1 charpent charpent  40 10 avril 21:18 
> local/lib/libSingular.so -> libSingular-4.2.0p1+2021-03-24+sage-2.so
>
> It seems that something (what ?) is not updated in the build process 
> scripts and still points to the Singular version used in 9.3.rc0. I 
> suppose that rebuildig would fix the problem, but is  a bit of a pain in 
> the *ss...
>
> Suggestions ? 
>
> Le mercredi 7 avril 2021 à 00:33:00 UTC+2, Volker Braun a écrit :
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>>
>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 
>> 9.3.rc2
>> 4275b275a2 Trac #31530: New subs bug caused by #30378
>> 70711cf13d Trac #31502: GH Actions: Free more disk space
>> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
>> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
>> into Singular build
>> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
>> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 
>> using ./configure --disable-r
>> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
>> directory, in an environment without SAGE_* variables, following symlinks
>> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build 
>> and fail
>> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
>> memlimit)
>> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
>> canonical embeddings of the base
>> 0606dc72e3 Trac #3

[sage-release] Re: Sage 9.3.rc2 released

[Matthias Köppe]

It's an annoying shortcoming of our build system. This particular problem 
is explained in https://trac.sagemath.org/ticket/29711, on which you are 
already cc'd. Overall I agree that possible remedies for failures in 
incremental builds are not sufficiently explained anywhere in our 
documentation. 

On Saturday, April 10, 2021 at 5:18:38 PM UTC-7 emanuel.c...@gmail.com 
wrote:

> Thanks. This seems to have done it.
>
> One more question ; how should I have divined this ? I can't remember 
> reading anything about this in the build instructions nor in the 
> developer's guide...
>
> Le dimanche 11 avril 2021 à 00:16:59 UTC+2, matthia...@gmail.com a écrit :
>
>> On Saturday, April 10, 2021 at 1:23:53 PM UTC-7 emanuel.c...@gmail.com 
>> wrote:
>>
>>> It seems that something (what ?) is not updated in the build process 
>>> scripts and still points to the Singular version used in 9.3.rc0. I 
>>> suppose that rebuildig would fix the problem [...]
>>>
>>
>> It suffices to rebuild sagelib. Use "make sagelib-clean" and then proceed 
>> with a normal build.
>>
>>
>>  
>>
>

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[sage-release] Re: Sage 9.3.rc2 released

[Emmanuel Charpentier]

Thanks. This seems to have done it.

One more question ; how should I have divined this ? I can't remember 
reading anything about this in the build instructions nor in the 
developer's guide...

Le dimanche 11 avril 2021 à 00:16:59 UTC+2, matthia...@gmail.com a écrit :

> On Saturday, April 10, 2021 at 1:23:53 PM UTC-7 emanuel.c...@gmail.com 
> wrote:
>
>> It seems that something (what ?) is not updated in the build process 
>> scripts and still points to the Singular version used in 9.3.rc0. I 
>> suppose that rebuildig would fix the problem [...]
>>
>
> It suffices to rebuild sagelib. Use "make sagelib-clean" and then proceed 
> with a normal build.
>
>
>  
>

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[sage-release] Re: Sage 9.3.rc2 released

[Matthias Köppe]

On Saturday, April 10, 2021 at 1:23:53 PM UTC-7 emanuel.c...@gmail.com 
wrote:

> It seems that something (what ?) is not updated in the build process 
> scripts and still points to the Singular version used in 9.3.rc0. I 
> suppose that rebuildig would fix the problem [...]
>

It suffices to rebuild sagelib. Use "make sagelib-clean" and then proceed 
with a normal build.


 

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[sage-release] Re: Sage 9.3.rc2 released

[Emmanuel Charpentier]

On Debian testing, upgrading from 9.3.rc0 to 9.3.rc2 fails at documentation 
building. From install.log :

make[3]: rien à faire pour « all-sage ».
[dochtml] Traceback (most recent call last):
[dochtml]   File "/usr/lib/python3.9/runpy.py", line 188, in _run_module_as_main
[dochtml] mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
[dochtml]   File "/usr/lib/python3.9/runpy.py", line 147, in _get_module_details
[dochtml] return _get_module_details(pkg_main_name, error)
[dochtml]   File "/usr/lib/python3.9/runpy.py", line 111, in _get_module_details
[dochtml] __import__(pkg_name)
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage_docbuild/__init__.py",
 line 57, in 
[dochtml] import sage.all
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/all.py", line 142, in 

[dochtml] from sage.rings.all  import *
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/all.py", line 
83, in 
[dochtml] from .polynomial.all import *
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/polynomial/all.py",
 line 42, in 
[dochtml] from sage.rings.polynomial.laurent_polynomial_ring import 
LaurentPolynomialRing
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/rings/polynomial/laurent_polynomial_ring.py",
 line 50, in 
[dochtml] from sage.rings.polynomial.laurent_polynomial import 
LaurentPolynomial_mpair, LaurentPolynomial_univariate
[dochtml]   File "sage/rings/polynomial/laurent_polynomial.pyx", line 1, in 
init sage.rings.polynomial.laurent_polynomial 
(build/cythonized/sage/rings/polynomial/laurent_polynomial.c:40841)
[dochtml]   File "sage/matrix/matrix0.pyx", line 28, in init 
sage.matrix.matrix0 (build/cythonized/sage/matrix/matrix0.c:44271)
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/modules/free_module.py",
 line 167, in 
[dochtml] import sage.matrix.matrix_space
[dochtml]   File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/matrix/matrix_space.py",
 line 55, in 
[dochtml] from . import matrix_mpolynomial_dense
[dochtml]   File "sage/matrix/matrix_mpolynomial_dense.pyx", line 1, in init 
sage.matrix.matrix_mpolynomial_dense 
(build/cythonized/sage/matrix/matrix_mpolynomial_dense.cpp:8652)
[dochtml] ImportError: libSingular-4.2.0p1+2021-03-13+sage.so: cannot open 
shared object file: No such file or directory
make[3]: *** [Makefile:2280 : doc-html] Erreur 1
make[2]: *** [Makefile:2160 : all-start] Erreur 2
make[2] : on quitte le répertoire « /usr/local/sage-9/build/make »

However :

charpent@zen-book-flip:/usr/local/sage-9$ ls -l local/lib/libSingular*
-rwxr-xr-x 1 charpent charpent 4618600 10 avril 21:18 
local/lib/libSingular-4.2.0p1+2021-03-24+sage-2.so
lrwxrwxrwx 1 charpent charpent  40 10 avril 21:18 local/lib/libSingular.so 
-> libSingular-4.2.0p1+2021-03-24+sage-2.so

It seems that something (what ?) is not updated in the build process 
scripts and still points to the Singular version used in 9.3.rc0. I suppose 
that rebuildig would fix the problem, but is  a bit of a pain in the *ss...

Suggestions ? 

Le mercredi 7 avril 2021 à 00:33:00 UTC+2, Volker Braun a écrit :

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
>
> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 9.3.rc2
> 4275b275a2 Trac #31530: New subs bug caused by #30378
> 70711cf13d Trac #31502: GH Actions: Free more disk space
> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
> into Singular build
> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 using 
> ./configure --disable-r
> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
> directory, in an environment without SAGE_* variables, following symlinks
> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build and 
> fail
> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
> memlimit)
> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
> canonical embeddings of the base
> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
> polytopes
> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax 
> with html
> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>
>

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[sage-release] Re: Sage 9.3.rc2 released

['axio...@yahoo.de' via sage-release]

I'm very sorry, it seems that the problem was elsewhere.  Rebuilding solved 
the issue.

axio...@yahoo.de schrieb am Freitag, 9. April 2021 um 12:54:55 UTC+2:

> Indeed, SageMath version 9.3.rc1, Release Date: 2021-03-29 works just 
> fine.
>
>
>
> axio...@yahoo.de schrieb am Freitag, 9. April 2021 um 12:38:55 UTC+2:
>
>> Unfortunately, one of the recent changes breaks the emacs interface 
>> sage-shell-mode, see https://trac.sagemath.org/ticket/31630.
>>
>> I think I recall that some display change was announced, I'll try to find 
>> out when it happened.
>>
>> Martin
>>
>> Volker Braun schrieb am Mittwoch, 7. April 2021 um 00:33:00 UTC+2:
>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html 
>>>
>>>
>>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 
>>> 9.3.rc2
>>> 4275b275a2 Trac #31530: New subs bug caused by #30378
>>> 70711cf13d Trac #31502: GH Actions: Free more disk space
>>> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
>>> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
>>> into Singular build
>>> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
>>> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 
>>> using ./configure --disable-r
>>> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
>>> directory, in an environment without SAGE_* variables, following symlinks
>>> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build 
>>> and fail
>>> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
>>> memlimit)
>>> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
>>> canonical embeddings of the base
>>> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
>>> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
>>> polytopes
>>> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling 
>>> MathJax with html
>>> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>>>
>>>

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[sage-release] Re: Sage 9.3.rc2 released

['axio...@yahoo.de' via sage-release]

Indeed, SageMath version 9.3.rc1, Release Date: 2021-03-29 works just fine.



axio...@yahoo.de schrieb am Freitag, 9. April 2021 um 12:38:55 UTC+2:

> Unfortunately, one of the recent changes breaks the emacs interface 
> sage-shell-mode, see https://trac.sagemath.org/ticket/31630.
>
> I think I recall that some display change was announced, I'll try to find 
> out when it happened.
>
> Martin
>
> Volker Braun schrieb am Mittwoch, 7. April 2021 um 00:33:00 UTC+2:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>>
>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 
>> 9.3.rc2
>> 4275b275a2 Trac #31530: New subs bug caused by #30378
>> 70711cf13d Trac #31502: GH Actions: Free more disk space
>> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
>> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
>> into Singular build
>> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
>> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 
>> using ./configure --disable-r
>> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
>> directory, in an environment without SAGE_* variables, following symlinks
>> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build 
>> and fail
>> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
>> memlimit)
>> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
>> canonical embeddings of the base
>> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
>> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
>> polytopes
>> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax 
>> with html
>> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>>
>>

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[sage-release] Re: Sage 9.3.rc2 released

['axio...@yahoo.de' via sage-release]

Unfortunately, one of the recent changes breaks the emacs interface 
sage-shell-mode, see https://trac.sagemath.org/ticket/31630.

I think I recall that some display change was announced, I'll try to find 
out when it happened.

Martin

Volker Braun schrieb am Mittwoch, 7. April 2021 um 00:33:00 UTC+2:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
>
> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 9.3.rc2
> 4275b275a2 Trac #31530: New subs bug caused by #30378
> 70711cf13d Trac #31502: GH Actions: Free more disk space
> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
> into Singular build
> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 using 
> ./configure --disable-r
> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
> directory, in an environment without SAGE_* variables, following symlinks
> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build and 
> fail
> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
> memlimit)
> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
> canonical embeddings of the base
> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
> polytopes
> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax 
> with html
> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>
>

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[sage-release] Re: Sage 9.3.rc2 released

[Matthias Köppe]

I have opened tickets for some but not all of these issues:

#31624 
fedora-34-standard: eclib, singular build failures with system ntl 


#31623 
homebrew-macos-10.15-standard-default: Doctest errors related to singular 


#31622 
conda-forge-macos: RuntimeError from qqbar cmp_elements_with_same_minpoly 


#31621 
ubuntu-groovy-standard: numerics-related sage testsuite errors 


Help is needed...

On Thursday, April 8, 2021 at 9:27:54 AM UTC-7 Matthias Köppe wrote:

> On Wednesday, April 7, 2021 at 10:29:29 AM UTC-7 Matthias Köppe wrote:
>
>> On Tuesday, April 6, 2021 at 3:33:00 PM UTC-7 Volker Braun wrote:
>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html 
>>>
>>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 
>>> 9.3.rc2
>>>
>>
>> Tests on various platforms are running at:
>> - https://github.com/sagemath/sage/actions/runs/724020346 (Linux and 
>> macOS)
>> - https://github.com/sagemath/sage/actions/runs/724020349 (Cygwin)
>> - https://github.com/sagemath/sage/actions/runs/724020348 (optional 
>> packages)
>>
>
> Here's a summary of these runs. I am comparing to 9.3.beta8, for which the 
> results were summarized in:
> - https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/zM2Bhfm0AwAJ, 
> - https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/75iHB1nYAwAJ,
> - https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/3Fkd7K1aAgAJ, 
> - https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/GXfB1rW1AgAJ:
>
> 9.3.beta8> 
> *ubuntu*-{trusty,xenial,bionic,focal,groovy,hirsute}-{minimal,standard}: 
> Clean
> 9.3.beta8> *debian*-{jessie,stretch,buster,bullseye,sid}-{minimal,standard}: 
> Clean
> 9.3.beta8> ... with the exception of:
> 9.3.beta8> {debian-bullseye,ubuntu-groovy}-standard: cvxopt testsuite 
> errors, *numerics-related sage testsuite errors*
> 9.3.beta8> (is system BLAS feeling OK??)
>
> The numerics failures on debian-bullseye have disappeared (or perhaps it 
> is processor dependent, and we were luckier in this run), but show up in 
> debian-sid this time. 
> *The numerics failures on **ubuntu-groovy are still present. **Could 
> someone please help by taking a look at these numerics errors on?*
> Everything else is unchanged in 9.3.rc2 (with some more results in thanks 
> to #31502). 
>
> 9.3.beta8> *linuxmint*-17-{minimal,standard}: *Doctest errors from 
> "setlocale" output*
> 9.3.beta8> linuxmint-{18,19,19.3,20.1}-{minimal,standard}: Clean
>
> Unchanged in 9.3.rc2. GH Actions running out of disk space in 
> linuxmint-20.1-standard - despite #31502.
>
> 9.3.beta8> *fedora*-26-minimal, centos-7-minimal, centos-7-i386-minimal: 
> openssl problem
>
> fedora-26-minimal and centos-7-minimal are clean now, thanks to 
> https://trac.sagemath.org/ticket/31439
>
> 9.3.beta8> fedora-{26,27,29,30,31,32,33}-standard: Clean
> 9.3.beta8> fedora-{27,28,29,30,31,32,33}-minimal: Clean
> 9.3.beta8> fedora-28-standard: 
> 9.3.beta8> - cvxopt testsuite errors
> 9.3.beta8> - src/sage/rings/polynomial/groebner_fan.py # 3 doctests failed
> 9.3.beta8> - *src/sage/rings/real_mpfr.pyx # Killed due to abort*
>
> *fedora-28-standard:* *Similar but not the same failures in 9.3.rc2*
>
> 9.3.beta8> fedora-34-standard:
> 9.3.beta8>   [eclib-20190909]   /usr/bin/ld: /usr/lib64/*libntl.so: 
> undefined reference* to 
> `std::__exception_ptr::exception_ptr::_M_release()@CXXABI_1.3.13'
>
> *fedora-34-standard eclib problem is unchanged in 9.3.rc2, and also issues 
> with ntl show up in singular*
>
> 9.3.beta8> *centos*-7-standard: [dochtml] ImportError: /lib64/*libz.so.1: 
> version `ZLIB_1.2.9' not found* (required by 
> /sage/local/lib/libpng16.so.16)
>
> Unchanged in 9.3.rc2
>
> 9.3.beta8> centos-8-{minimal,standard}: Clean
>
> 9.3.beta8> *gentoo*-{minimal,standard}: Clean
> 9.3.beta8> gentoo-python3.7-{minimal,standard}: Clean
>
> *New doctest failures *for all of these from linker messages - 
> https://trac.sagemath.org/ticket/31578
>
> 9.3.beta8> *archlinux*-latest-{minimal,standard}: Clean
>
> Unchanged in 9.3.rc2
>
> 9.3.beta8> *slackware*-14.2-{minimal,standard}: Clean
>
> Unchanged in 9.3.rc2
>
> 9.3.beta8> *conda-forge*-minimal: *Error building package python3-3.9.1*
> 9.3.beta8> *conda-forge*-standard: *Sage does not accept system python3*
>
> Unchanged in 9.3.rc2
>
> 9.3.beta8> *ubuntu-*{bionic,focal}*-i386*-minimal: 
> [openssl-3.0.0-alpha11] /usr/include/stdio.h:27:10: fatal error: 
> bits/libc-header-start.h: No such file or directory
> 9.3.beta8> *debian*-buster-*i386*-minimal: likewise
> 9.3.beta8> debian-buster-i386-stan

[sage-release] Re: Sage 9.3.rc2 released

[Matthias Köppe]

On Wednesday, April 7, 2021 at 10:29:29 AM UTC-7 Matthias Köppe wrote:

> On Tuesday, April 6, 2021 at 3:33:00 PM UTC-7 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 
>> 9.3.rc2
>>
>
> Tests on various platforms are running at:
> - https://github.com/sagemath/sage/actions/runs/724020346 (Linux and 
> macOS)
> - https://github.com/sagemath/sage/actions/runs/724020349 (Cygwin)
> - https://github.com/sagemath/sage/actions/runs/724020348 (optional 
> packages)
>

Here's a summary of these runs. I am comparing to 9.3.beta8, for which the 
results were summarized in:
- https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/zM2Bhfm0AwAJ, 
- https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/75iHB1nYAwAJ,
- https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/3Fkd7K1aAgAJ, 
- https://groups.google.com/g/sage-release/c/KdSKg6RdZok/m/GXfB1rW1AgAJ:

9.3.beta8> 
*ubuntu*-{trusty,xenial,bionic,focal,groovy,hirsute}-{minimal,standard}: 
Clean
9.3.beta8> *debian*-{jessie,stretch,buster,bullseye,sid}-{minimal,standard}: 
Clean
9.3.beta8> ... with the exception of:
9.3.beta8> {debian-bullseye,ubuntu-groovy}-standard: cvxopt testsuite 
errors, *numerics-related sage testsuite errors*
9.3.beta8> (is system BLAS feeling OK??)

The numerics failures on debian-bullseye have disappeared (or perhaps it is 
processor dependent, and we were luckier in this run), but show up in 
debian-sid this time. 
*The numerics failures on **ubuntu-groovy are still present. **Could 
someone please help by taking a look at these numerics errors on?*
Everything else is unchanged in 9.3.rc2 (with some more results in thanks 
to #31502). 

9.3.beta8> *linuxmint*-17-{minimal,standard}: *Doctest errors from 
"setlocale" output*
9.3.beta8> linuxmint-{18,19,19.3,20.1}-{minimal,standard}: Clean

Unchanged in 9.3.rc2. GH Actions running out of disk space in 
linuxmint-20.1-standard - despite #31502.

9.3.beta8> *fedora*-26-minimal, centos-7-minimal, centos-7-i386-minimal: 
openssl problem

fedora-26-minimal and centos-7-minimal are clean now, thanks to 
https://trac.sagemath.org/ticket/31439

9.3.beta8> fedora-{26,27,29,30,31,32,33}-standard: Clean
9.3.beta8> fedora-{27,28,29,30,31,32,33}-minimal: Clean
9.3.beta8> fedora-28-standard: 
9.3.beta8> - cvxopt testsuite errors
9.3.beta8> - src/sage/rings/polynomial/groebner_fan.py # 3 doctests failed
9.3.beta8> - *src/sage/rings/real_mpfr.pyx # Killed due to abort*

*fedora-28-standard:* *Similar but not the same failures in 9.3.rc2*

9.3.beta8> fedora-34-standard:
9.3.beta8>   [eclib-20190909]   /usr/bin/ld: /usr/lib64/*libntl.so: 
undefined reference* to 
`std::__exception_ptr::exception_ptr::_M_release()@CXXABI_1.3.13'

*fedora-34-standard eclib problem is unchanged in 9.3.rc2, and also issues 
with ntl show up in singular*

9.3.beta8> *centos*-7-standard: [dochtml] ImportError: /lib64/*libz.so.1: 
version `ZLIB_1.2.9' not found* (required by /sage/local/lib/libpng16.so.16)

Unchanged in 9.3.rc2

9.3.beta8> centos-8-{minimal,standard}: Clean

9.3.beta8> *gentoo*-{minimal,standard}: Clean
9.3.beta8> gentoo-python3.7-{minimal,standard}: Clean

*New doctest failures *for all of these from linker messages 
- https://trac.sagemath.org/ticket/31578

9.3.beta8> *archlinux*-latest-{minimal,standard}: Clean

Unchanged in 9.3.rc2

9.3.beta8> *slackware*-14.2-{minimal,standard}: Clean

Unchanged in 9.3.rc2

9.3.beta8> *conda-forge*-minimal: *Error building package python3-3.9.1*
9.3.beta8> *conda-forge*-standard: *Sage does not accept system python3*

Unchanged in 9.3.rc2

9.3.beta8> *ubuntu-*{bionic,focal}*-i386*-minimal: [openssl-3.0.0-alpha11] 
/usr/include/stdio.h:27:10: fatal error: bits/libc-header-start.h: No such 
file or directory
9.3.beta8> *debian*-buster-*i386*-minimal: likewise
9.3.beta8> debian-buster-i386-standard: Clean except for
9.3.beta8> - src/sage/*parallel/decorate.py* # 1 doctest failed
9.3.beta8> - src/sage/schemes/*elliptic_curves/ell_field.py* # 1 doctest 
failed
 

9.3.beta8> *homebrew-macos-10.15**-minimal**-xcode_11.7* (
https://github.com/sagemath/sage/runs/2051746258): Clean except for:
9.3.beta8> sage -t --random-seed=0 src/sage/geometry/polyhedron/base.py  # 
1 doctest failed (*get_memory_usage*)
9.3.beta8> sage -t --random-seed=0 src/sage/interfaces/gap.py  # 1 doctest 
failed
9.3.beta8> (File "src/sage/interfaces/*gap*.py", line 482, in 
sage.interfaces.gap.Gap_generic._read_in_file_command)

9.3.beta8> *-standard-default* likewise

*New errors that appear to be related to Singular!*
*https://github.com/sagemath/sage/runs/2282411164*
*sage -t --random-seed=0 
src/sage/dynamics/arithmetic_dynamics/projective_ds.py  # 12 doctests 
failed*
*sage -t --random-seed=0 src/sage/geometry/polyhedron/base.py  # 1 doctest 
failed*
*sage -t --random-

Re: [sage-release] Re: Sage 9.3.rc2 released

[Samuel Lelièvre]

Thanks Volker for the new release and Matthias for the overview
of remaining work.

On macOS 10.14.6 with many Homebrew packages, from an
existing SageMath 9.3.rc0, after the following commands:
```
$ source .homebrew-build-env && ./bootstrap -q && ./configure -q
```
the extraneous configure message (dealt with at #31496) was
displayed. After that, the following commands
```
$ MAKE='make -j1' && make -s V=0 && make -s V=0 testlong
```
gave "All tests passed!".: )   : )   : )--Samuel

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[sage-release] Re: Sage 9.3.rc2 released

[Matthias Köppe]

On Tuesday, April 6, 2021 at 3:33:00 PM UTC-7 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 9.3.rc2
>

Thanks, Volker, for the new release candidate! Looks like we are getting 
closer to a working release.

Tests on various platforms are running at:
- https://github.com/sagemath/sage/actions/runs/724020346 (Linux and macOS)
- https://github.com/sagemath/sage/actions/runs/724020349 (Cygwin)
- https://github.com/sagemath/sage/actions/runs/724020348 (optional 
packages)

*All: *We do not have working automatic tests for the *Windows Subsystem 
for Linux* platforms (WSL1 and WSL2). If you have access to a machine 
running Windows 10, *testing on these platforms will be very helpful. 
*(https://trac.sagemath.org/ticket/31612 
(*needs review*) may or may not be needed.)

*Volker: *Repeating my suggestion in 
https://trac.sagemath.org/ticket/22657#comment:10 (to which I have not 
received a reaction yet), could you please run the *binary building scripts* 
for this (or the next) release candidate so that developers can test 
whether the built binaries work -- in particular, whether they are portable 
between processor variants.

*Volker: *I would like to see a number of "workhorse" tickets merged in the 
next release candidate:
- https://trac.sagemath.org/ticket/31592 - another fix to the Singular 
build scripts, fixes a reported build failure
- https://trac.sagemath.org/ticket/31496 - removes a message from the 
configure output with big potential to confuse users
- https://trac.sagemath.org/ticket/31554 and 
https://trac.sagemath.org/ticket/31479 - symbolics bugs with blocker flavor
- https://trac.sagemath.org/ticket/31515 - sympy bugfix upgrade (1.7->1.7.1)
- https://trac.sagemath.org/ticket/31532, 
https://trac.sagemath.org/ticket/30213, 
https://trac.sagemath.org/ticket/31541 *(needs review)*, 
https://trac.sagemath.org/ticket/31534 
*(needs review)* - more updates to the GH Actions workflows so that our 
demonstration of platform support in the release tour will be more 
impressive
- https://trac.sagemath.org/ticket/31505 *(needs review)* - no longer 
refuse to build when MacPorts is active
- https://trac.sagemath.org/ticket/27804 - enables build of the polymake 
package on platforms where our lrslib package is broken (I know, not a 
blocker ticket by definition)

*All: *Thanks to all who have contributed to https://wiki.sagemath.org/
*ReleaseTours*/sage-9.3! More help, also with balancing out the writing, is 
very welcome. 

*All: *Also some last minute work on our *documentation* would be very 
valuable: https://trac.sagemath.org/ticket/29784, 
https://trac.sagemath.org/ticket/31101
 
*All:* In addition to testing the SageMath distribution, please also help 
testing our new *PyPI distribution packages ("pip-installable Sage").* See 
https://pypi.org/project/sagemath-standard/ 
and https://pypi.org/project/sage-conf/ . (The pip install of the source 
packages should work on all platforms; the *pre-built wheels* are only 
available for macOS 10.15 Python 3.8 at the moment.)



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Re: [sage-release] Re: Sage 9.3.rc2 released

[Kenji Iohara]

On my mac with OS 11.2.3, the first built worked perfectly.
I haven't tried ptestlong yet.

2021年4月7日(水) 3:13 Steven Trogdon :

> Incremental upgrade from rc1 -> rc2 did not build here with
> git pull && make
> There was at least one Sage component that was linked against the old
> Singular. Rebuilding sagelib then worked
> ./sage -f sagelib && make
>
> Perhaps there was another way to accomplish the build.
>
> On Tuesday, April 6, 2021 at 4:33:00 PM UTC-6 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git
>> branch. Alternatively, the self-contained source tarball is at
>> http://www.sagemath.org/download-latest.html
>>
>>
>> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to
>> 9.3.rc2
>> 4275b275a2 Trac #31530: New subs bug caused by #30378
>> 70711cf13d Trac #31502: GH Actions: Free more disk space
>> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
>> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking
>> into Singular build
>> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
>> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2
>> using ./configure --disable-r
>> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any
>> directory, in an environment without SAGE_* variables, following symlinks
>> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build
>> and fail
>> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to
>> memlimit)
>> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve
>> canonical embeddings of the base
>> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
>> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of
>> polytopes
>> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax
>> with html
>> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>>
>> --
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> 
> .
>

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[sage-release] Re: Sage 9.3.rc2 released

[Kwankyu Lee]

Thanks for the release. 

Incremental build from 9.3.rc1 on mac pro with Big Sur succeeded with no 
problem. All doctests passed. 

On Wednesday, April 7, 2021 at 7:33:00 AM UTC+9 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
>
> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 9.3.rc2
> 4275b275a2 Trac #31530: New subs bug caused by #30378
> 70711cf13d Trac #31502: GH Actions: Free more disk space
> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
> into Singular build
> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 using 
> ./configure --disable-r
> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
> directory, in an environment without SAGE_* variables, following symlinks
> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build and 
> fail
> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
> memlimit)
> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
> canonical embeddings of the base
> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
> polytopes
> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax 
> with html
> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>
>

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[sage-release] Re: Sage 9.3.rc2 released

[Steven Trogdon]

Incremental upgrade from rc1 -> rc2 did not build here with
git pull && make
There was at least one Sage component that was linked against the old 
Singular. Rebuilding sagelib then worked
./sage -f sagelib && make

Perhaps there was another way to accomplish the build.

On Tuesday, April 6, 2021 at 4:33:00 PM UTC-6 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
>
> 824f9cccaf (tag: 9.3.rc2, trac/develop) Updated SageMath version to 9.3.rc2
> 4275b275a2 Trac #31530: New subs bug caused by #30378
> 70711cf13d Trac #31502: GH Actions: Free more disk space
> f38d467ae0 Trac #31584: Fix suitesparse/cvxopt /usr/local leakage
> 22a11999f2 Trac #31552: Update singular to stop /usr/local from leaking 
> into Singular build
> 24d1bdb786 Trac #31523: Fix dependencies of ipywidgets
> ad70e647c5 Trac #31409: Make it possible to disable build of r, rpy2 using 
> ./configure --disable-r
> 7b44d1cb00 Trac #30888: Make $SAGE_LOCAL/bin/sage work again from any 
> directory, in an environment without SAGE_* variables, following symlinks
> 8736c424b9 Trac #31538: i386: openssl and tachyon attempt 64-bit build and 
> fail
> c7c058bd65 Trac #31395: RuntimeError: can't start new thread (due to 
> memlimit)
> 9a1e3ccb6b Trac #31558: homomorphism of extension fields do not preserve 
> canonical embeddings of the base
> 0606dc72e3 Trac #31551: Incorrect conversion from ℚ[-i] to SR
> 71123d8021 Trac #30319: Upgrade cddlib to fix wrong intersection of 
> polytopes
> 3da0a29d9f Trac #31536: Fix Sage rich output problems by coupling MathJax 
> with html
> a89f81d778 (tag: 9.3.rc1) Updated SageMath version to 9.3.rc1
>
>

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