Re: [sage-release] Sage 9.3.beta8 released
On Monday, March 15, 2021 at 6:00:13 PM UTC-7 Samuel Lelievre wrote: > 2021-03-14 17:53 UTC, Matthias Köppe: > > Could you try with: export SETUPTOOLS_USE_DISTUTILS=local > > before restarting build? > > That trick helps. > > a. > > Starting from the same branch that failed above, this > ``` > $ source .homebrew-build-env > $ export SETUPTOOLS_USE_DISTUTILS=local > $ ./bootstrap -q && ./configure -q && make -s V=0 > ``` > succeeds in building cysignals-1.10.2 and many more > packages Thanks for testing! > but eventually fails to build argon2_cffi-20.1.0. > Yes, this one fixed in https://trac.sagemath.org/ticket/31441 (already merged in 9.3.beta9) > In a different install, applying tickets 31474 (upgrade cysignals) > and 31335, the build fails on distutil. > ... dateutil, actually. This looks like a typical error that arises when you switch the version of python3 in an existing build. Nothing to fix, it will go away if you run "make distclean" or possibly just "rm $SAGE_LOCAL/pyvenv.cfg" -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/db9addff-bf56-4884-aad7-efd020125e05n%40googlegroups.com.
Re: [sage-release] Sage 9.3.beta8 released
2021-03-14 17:53 UTC, Matthias Köppe:
>
> On Sunday, March 14, 2021 at 10:48:30 AM UTC-7 Samuel Lelievre wrote:
>>
>> 2021-03-13 17:27 UTC, Matthias Köppe:
>> > On Friday, March 12, 2021 at 1:00:17 PM UTC-8 Samuel Lelievre wrote:
>> >> On macOS 10.14.6, with Homebrew, failed to build cysignals-1.10.2.
>> > This is another instance of homebrew packages
>> > leaking into the build, in this case pari.
>> >
>> > Please try with https://trac.sagemath.org/ticket/31335
>> > ("homebrew: Unused packages (singular, pari, ...)
>> > in /usr/local leak into sagelib build via distutils.cfg")
>>
>> Tried with #31335 applied: cysignals still fails to build.
>>
>> https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31335.zip
>
>
> Thanks for testing!
>
> Could you try with: export SETUPTOOLS_USE_DISTUTILS=local
> before restarting build?
That trick helps.
a.
Starting from the same branch that failed above, this
```
$ source .homebrew-build-env
$ export SETUPTOOLS_USE_DISTUTILS=local
$ ./bootstrap -q && ./configure -q && make -s V=0
```
succeeds in building cysignals-1.10.2 and many more
packages but eventually fails to build argon2_cffi-20.1.0.
Logs:
https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31335-trick.zip
b.
Starting from a fresh clone, similar result.
Logs:
https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31335-trick-fresh.zip
c.
In a different install, applying tickets 31474 (upgrade cysignals)
and 31335, the build fails on distutil.
https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31474-t31335.zip
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/CAEcArF1n6RToKdNaK3vv5%2BQ0kmWF%2BEB9zzTgPFd0jnqas7ZiEQ%40mail.gmail.com.
Re: [sage-release] Sage 9.3.beta8 released
On Sunday, March 14, 2021 at 10:48:30 AM UTC-7 Samuel Lelievre wrote:
> 2021-03-13 17:27 UTC, Matthias Köppe:
> > On Friday, March 12, 2021 at 1:00:17 PM UTC-8 Samuel Lelievre wrote:
> >> On macOS 10.14.6, with Homebrew, failed to build cysignals-1.10.2.
> > This is another instance of homebrew packages
> > leaking into the build, in this case pari.
> >
> > Please try with https://trac.sagemath.org/ticket/31335
> > ("homebrew: Unused packages (singular, pari, ...)
> > in /usr/local leak into sagelib build via distutils.cfg")
>
> Tried with #31335 applied: cysignals still fails to build.
>
> https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31335.zip
>
Thanks for testing!
Could you try with: export SETUPTOOLS_USE_DISTUTILS=local
before restarting build?
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/7c322c67-b67e-46e5-a0ac-3ec515ed8cb6n%40googlegroups.com.
Re: [sage-release] Sage 9.3.beta8 released
2021-03-13 17:27 UTC, Matthias Köppe:
>
> On Friday, March 12, 2021 at 1:00:17 PM UTC-8 Samuel Lelievre wrote:
>>
>> On macOS 10.14.6, with Homebrew, failed to build cysignals-1.10.2.
>>
>> Logs:
>>
>> https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-12-s93b8.zip
>
> From your log:
>
> gcc -bundle -undefined dynamic_lookup -isysroot
> /Library/Developer/CommandLineTools/SDKs/MacOSX10.14.sdk
> -L/opt/s/sage93c/local/lib -Wl,-rpath,/opt/s/sage93c/local/lib -O2 -g
> -march=native -Wp,-U_FORTIFY_SOURCE
> build/temp.macosx-10.14-x86_64-3.9/build/src/cysignals/signals.o
> -L/usr/local/lib -L/usr/local/opt/openssl@1.1/lib -L/usr/local/opt/sqlite/lib
> -L/usr/local/opt/tcl-tk/lib -o
> build/lib.macosx-10.14-x86_64-3.9/cysignals/signals.cpython-39-darwin.so
> -lpari -pthread
> ld: illegal data reference in _PARI_SIGINT_block to thread local variable
> _PARI_SIGINT_block in dylib /opt/s/sage93c/local/lib/libpari.dylib for
> architecture x86_64
> clang: error: linker command failed with exit code 1 (use -v to see
> invocation)
> error: command '/usr/bin/gcc' failed with exit code 1
> Building wheel for cysignals (setup.py): finished with status 'error'
>
> This is another instance of homebrew packages
> leaking into the build, in this case pari.
>
> Please try with https://trac.sagemath.org/ticket/31335
> ("homebrew: Unused packages (singular, pari, ...)
> in /usr/local leak into sagelib build via distutils.cfg")
Tried with #31335 applied: cysignals still fails to build.
https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-14-s93b8-t31335.zip
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/CAEcArF2nKEo-TwecbNt_4yWu3eSjoU9p9YTR6WkzGqQ5SJ3Dnw%40mail.gmail.com.
Re: [sage-release] Sage 9.3.beta8 released
>From your log:
gcc -bundle -undefined dynamic_lookup -isysroot
/Library/Developer/CommandLineTools/SDKs/MacOSX10.14.sdk
-L/opt/s/sage93c/local/lib -Wl,-rpath,/opt/s/sage93c/local/lib -O2 -g
-march=native -Wp,-U_FORTIFY_SOURCE
build/temp.macosx-10.14-x86_64-3.9/build/src/cysignals/signals.o
-L/usr/local/lib -L/usr/local/opt/openssl@1.1/lib
-L/usr/local/opt/sqlite/lib -L/usr/local/opt/tcl-tk/lib -o
build/lib.macosx-10.14-x86_64-3.9/cysignals/signals.cpython-39-darwin.so
-lpari -pthread
ld: illegal data reference in _PARI_SIGINT_block to thread local variable
_PARI_SIGINT_block in dylib /opt/s/sage93c/local/lib/libpari.dylib for
architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see
invocation)
error: command '/usr/bin/gcc' failed with exit code 1
Building wheel for cysignals (setup.py): finished with status 'error'
This is another instance of homebrew packages leaking into the build, in
this case pari.
Please try with https://trac.sagemath.org/ticket/31335 ("homebrew: Unused
packages (singular, pari, ...) in /usr/local leak into sagelib build via
distutils.cfg")
On Friday, March 12, 2021 at 1:00:17 PM UTC-8 Samuel Lelievre wrote:
> Thanks for this new release.
>
> On macOS 10.14.6, with Homebrew, failed to build cysignals-1.10.2.
>
> Logs:
>
> https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-12-s93b8.zip
>
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/984b1954-cb00-4a87-be07-6c63e3d529c3n%40googlegroups.com.
Re: [sage-release] Sage 9.3.beta8 released
Thanks for this new release. On macOS 10.14.6, with Homebrew, failed to build cysignals-1.10.2. Logs: https://www.math.u-psud.fr/~lelievre/t/slel-2021-03-12-s93b8.zip -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/CAEcArF1uCTO66Why5T4CBu8y867S54s1aAN9NSsm1DDwh8kzPQ%40mail.gmail.com.
Re: [sage-release] Sage 9.3.beta8 released
> On Mar 9, 2021, at 12:14, 'Justin C. Walker' via sage-release > wrote: > > > >> On Mar 7, 2021, at 13:35 , Volker Braun wrote: >> >> As always, you can get the latest beta version from the "develop" git >> branch. Alternatively, the self-contained source tarball is at >> http://www.sagemath.org/download-latest.html > > Built successfully on two macOS platforms ( 10.13.6, 2017 iMac, 18-core Xeon > W; 10.14.6 2017 MBP, Core i7). > Testing (‘ptestlong’) had no failures on either one. > > Build/test on a 2019 MBP, macOS 10.15.7 (8-core Core i9) will occur later > this week. Finally, I am able to build a 9.3 beta on 10.15 macOS system. No problems with the build, and all tests passed! Thanks for the hard work to get this working. Not sure what made the difference for “make configure”. In fact, now that works for previous betas. Justin -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/AFA75C00-7F0E-4C4E-A1F1-A56D87AF07FC%40mac.com.
Re: [sage-release] Sage 9.3.beta8 released
> On Mar 7, 2021, at 13:35 , Volker Braun wrote: > > As always, you can get the latest beta version from the "develop" git branch. > Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html Built successfully on two macOS platforms ( 10.13.6, 2017 iMac, 18-core Xeon W; 10.14.6 2017 MBP, Core i7). Testing (‘ptestlong’) had no failures on either one. Build/test on a 2019 MBP, macOS 10.15.7 (8-core Core i9) will occur later this week. Justin PS: no package managers were used or harmed in this process. -- Justin C. Walker, Curmudgeon-At-Large Institute for the Absorption of Federal Funds If you're not confused, You're not paying attention -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/EF0324D1-D97F-476E-84DC-D9E46127E2EB%40mac.com.
Re: [sage-release] Sage 9.3.beta8 released
Exactly that, thanks for adding me. I can reliably reproduce it. > On 9/03/2021, at 09:01, Matthias Köppe wrote: > > See https://trac.sagemath.org/ticket/30945 > > On Monday, March 8, 2021 at 11:52:46 AM UTC-8 François Bissey wrote: > I have been having a segfault in that file for a while between 9.3.beta7 and > 9.3.beta8 > in sage-on-gentoo when running parallel testing. However the tests run all > fine on that > file when doing an individual run. There probably can be some kind of race > condition > when running in parallel. > > > On 8/03/2021, at 23:27, Thierry Dumont wrote: > > > > 1 error: > > > > sage -t --long --warn-long 89.4 --random-seed=0 > > src/sage/interfaces/singular.py > > Killed due to segmentation fault > > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-release+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-release/f0a6f03c-cbf4-4a88-8929-8dd453c6c9e7n%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/D15EC57E-D116-4393-9240-4A9859C58B38%40gmail.com.
Re: [sage-release] Sage 9.3.beta8 released
See https://trac.sagemath.org/ticket/30945 On Monday, March 8, 2021 at 11:52:46 AM UTC-8 François Bissey wrote: > I have been having a segfault in that file for a while between 9.3.beta7 > and 9.3.beta8 > in sage-on-gentoo when running parallel testing. However the tests run all > fine on that > file when doing an individual run. There probably can be some kind of race > condition > when running in parallel. > > > On 8/03/2021, at 23:27, Thierry Dumont > wrote: > > > > 1 error: > > > > sage -t --long --warn-long 89.4 --random-seed=0 > src/sage/interfaces/singular.py > > Killed due to segmentation fault > > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/f0a6f03c-cbf4-4a88-8929-8dd453c6c9e7n%40googlegroups.com.
Re: [sage-release] Sage 9.3.beta8 released
I have been having a segfault in that file for a while between 9.3.beta7 and 9.3.beta8 in sage-on-gentoo when running parallel testing. However the tests run all fine on that file when doing an individual run. There probably can be some kind of race condition when running in parallel. > On 8/03/2021, at 23:27, Thierry Dumont wrote: > > 1 error: > > sage -t --long --warn-long 89.4 --random-seed=0 > src/sage/interfaces/singular.py >Killed due to segmentation fault -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/8C42BFC2-3F95-42E3-BDE2-0E44842463ED%40gmail.com.
Re: [sage-release] Sage 9.3.beta8 released
Hi,
Migration from beta 7 to beta 8 (Ubuntu 20.10):
-compilation: ok.
- make ptestlong:
1 error:
sage -t --long --warn-long 89.4 --random-seed=0
src/sage/interfaces/singular.py
Killed due to segmentation fault
**
Tests run before process (pid=134886) failed:
sage: R1 = singular.ring(0, '(x,y)', 'dp') ## line 65 ##
sage: R1 ## line 66 ##
polynomial ring, over a field, global ordering
// coefficients: QQ
// number of vars : 2
//block 1 : ordering dp
// : namesx y
//block 2 : ordering C
sage: f = singular('9x16 - 18x13y2 - 9x12y3 + 9x10y4 - 18x11y2 + 36x8y4
+ 18x7y5 - 18x5y6 + 9x6y4 - 18x3y6 - 9x2y7 + 9y8') ## line 73 ##
sage: f ## line 74 ##
9*x^16-18*x^13*y^2-9*x^12*y^3+9*x^10*y^4-18*x^11*y^2+36*x^8*y^4+18*x^7*y^5-18*x^5*y^6+9*x^6*y^4-18*x^3*y^6-9*x^2*y^7+9*y^8
sage: f.parent() ## line 76 ##
Singular
sage: F = f.factorize(); F ## line 81 ##
[1]:
_[1]=9
_[2]=x^6-2*x^3*y^2-x^2*y^3+y^4
_[3]=-x^5+y^2
[2]:
1,1,2
sage: F[1] ## line 91 ##
9,
x^6-2*x^3*y^2-x^2*y^3+y^4,
-x^5+y^2
sage: F[1][2] ## line 95 ##
x^6-2*x^3*y^2-x^2*y^3+y^4
sage: g = f.sage(); g ## line 103 #
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/bb58e017-88f1-2890-108e-0eb3d82f8097%40math.univ-lyon1.fr.
[sage-release] Sage 9.3.beta8 released
As always, you can get the latest beta version from the "develop" git
branch. Alternatively, the self-contained source tarball is at
http://www.sagemath.org/download-latest.html
fbca269f62 (HEAD -> develop, tag: 9.3.beta8, trac/develop) Updated SageMath
version to 9.3.beta8
d6cf85bd50 Trac #31182: Mutability class and pickling
7dfb05af9e Trac #31180: Add snappy as a pip package
ca1e4a13a4 Trac #31177: Add graphviz, pygraphviz packages
31ec40016f Trac #31114: Add one file build/pkgs/*/repology.txt per spkg
5ba3c41d0d Trac #31036: fixdoctests fails on multiline tests
7217db8510 Trac #31003: Add minimal pytest configuration
c462eeb3a2 Trac #30984: sage_setup: Replace imports from distutils by
setuptools
f0ab074e25 Trac #30892: Characteristic polynomials over complete discrete
valuation rings/fields
4415f75238 Trac #30809: interactive_simplex_method: Use of \color breaks
typesetting of dictionaries in the Jupyter notebook
c8bc428f89 Trac #30728: Drawing generalizations of generalized Petersen
graphs
8ff8b0b90c Trac #30537: Upgrade giac to 1.6.0-47
1d5df64577 Trac #30186: containment check for standard bracketed lyndon
words does not work
d6122cd297 Trac #29632: segfault in `is_identity` morphism check over
number fields
73cedf7005 Trac #31045: pip, wheel, setuptools: Make wheels available in
SAGE_SPKG_WHEELS
a7f0295eab Trac #30688: Crash when expanding square root of -x
61c5e093c2 Trac #30446: Update pynac to 0.7.27 to fix wrong result on
symbolic exponentiation
034ca5e1b0 Trac #18416: UniqueRepresentation issue with PowerSeriesRing
08ae587ef9 Trac #30482: Remove src/sage/symbolic/todo.txt
4ceb8ac45b Trac #30426: crt with ideals
31073aa13a Trac #30174: Trivial coercion
Modules(QQ)(FiniteRankFreeModule(QQ, 3)) fails
bcc6cf26f5 Trac #3: Implement a Q-curve test for elliptic curves over
number fields
e976bd8767 Trac #29497: package symengine and its Python interface
b2f9f25ec2 Trac #28143: Minimal kernel bases
da639c3ea3 Trac #25934: Problem displaying a number field (fractional) ideal
826e5c1fc7 Trac #17684: density_plot() is broken with functions involving
symbolic expressions
e7399bf8ec Trac #8972: Inversion and fraction fields for power series rings
df91b09b67 Trac #31397: Work around LaTeX bug for building pdf documentation
21c7c76aff Trac #31389: Remove clash of tdlib/ with tdlib.pyx in
src/sage/graphs/graph_decompositions
4f4413737f Trac #31382: bashisms in build/bin/sage-build-env
d1b1f0567f Trac #31372: pari_jupyter is not compatible with python 3.9,
breaks docker build on gitlab
ad228e2f1e Trac #31357: Fixup src/VERSION.txt added in #30912
bca796beeb Trac #31279: Add package argon2-cffi (dependency of Jupyter
notebook)
aa7a2090ed Trac #31191: ubuntu-bionic-standard (python 3.6): make ptest
fails with UnicodeDecodeError
10b3abca15 Trac #29152: Cygwin: Fix cliquer, giac, meataxe, rw, libbraiding
to build shared libraries, using `AM_LDFLAGS=-no-undefined`
dd6f37ed42 Trac #31412: GH Actions: Fix up for new linux runner default
f2fea77292 Trac #31344: homebrew: docbuild crashes, libtcl AtForkPrepare -
from sage.misc.cython globals / multiprocessing
1159ab4a12 Trac #30378: (x^2).subs({x: sqrt(x)}) returns sqrt(x) instead
of x
46f654efa9 Trac #29969: Make misc doctests ready for random seeds
4767972249 Trac #29967: Make interfaces doctests ready for random seeds
f44c3edaa2 Trac #29964: Make libs doctests ready for random seeds
6f07106cd4 Trac #29555: Upgrade: OpenSSL 3.0, make it a standard package
77332630b7 Trac #26563: Add doctest for elliptic integrals of the second
kind
0b99fac56b Trac #26410: Make threejs / three.js viewer respect thickness in
parametric_plot3d
fe431c0397 Trac #25322: Some cleanup of the libsingular polynomial
constructor
d2cf1d0770 Trac #15114: disallow dangerous coercions to RIF
10f5eb7782 Trac #10332: isPositiveSemiDefinite not accessible
8ac3225c89 Trac #31064: ci-cygwin*.yml: delegate to tox, add more stages,
use more specific SAGE_LOCAL
c61a5bea30 Trac #30912: sagelib: Update metadata for PyPI deployment as
package sagemath-standard
94156f67ab Trac #30770: cython_aliases: Use ecl-config to determine
compiler/linker flags for ecl
1a79f3f401 Trac #31227: Accept /usr/bin/python3 from XCode 12.3 on macOS
10.15 (Catalina) and 11 (Big Sur)
090547c55a Trac #31118: sage --package update-latest: Fix for
package-names-containing-dashes; accept package classes :standard:,
:optional: etc., restrict to normal Python packages; fix sage --package
fix-checksum
8453ffb849 (tag: 9.3.beta7) Updated SageMath version to 9.3.beta7
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to sage-release+unsubscr...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/d50bbb8e-8165-453e-a221-e0a735fadeaan%40googlegroups.com.
