Re: [sage-support] Problems installing sage in ubuntu-9.10 amd64

2010-02-13 Thread David Kirkby
2010/2/13 Jorge E. ´Sanchez Sanchez hnr...@hotmail.com:

 Dear support group,

 after typing a Yes to an update notification of Ubuntu-9.04 to 9.10 it
 became unstable, first in an unnoticed way, until finally all my
 installation crashes in a sudden unable to boot.

That could be a hardware problem.

 So I reinstall linux 9.10 from zero and I also could install sage-4.3.2 from
 sources successfully without any problems, while trying to install ETS
 perhaps I change something unadverteadly and when starting sage again it
 began to send messages about having problems with some packages, even did
 not recognize python commands.

What do you mean exactly by Why trying to install ETS?

 So I tried to recompile again from the very
 beginning, but now it cannot accomplishes the task (the message in the last
 occasion was something like: configuring R with Atlas ... cannot find
 sources -src/include/Defn.h- ... r-2.10.1 /src/po/R.pot ... cannot create
 regular file 'src/src/scripts/ no such file or directory ... config.error
 cannot find sources).

What is the *exact* error mesage? Someting like is not very helpful.

 So I download again the tar file and try again unsuccesfully.

That is a bit pointless. You should just compute the md5 checksum of
the file (I assume linux has a command for that. I normally use
OpenSLL myself:

$ digest -a md5 sage-x.y.z.tar

but you might have a program called 'md5' or 'md5sum'.

If the md5 checksum is the same as list on the sage mirrors, you can
be almost certain the file is the same. I believe the probability of
error is then on 1/2^128, which is about 3x10^-39.

 After many
 tries I gave up and download the precompiled binary but then sending the
 ./sage command the answer to it is:

 r...@eolo:/opt/sage-4.3.2-linux-64bit-ubuntu_9.10-x86_64-Linux# ./sage
 --
 | Sage Version 4.3.2, Release Date: 2010-02-06   |
 | Type notebook() for the GUI, and license() for information.    |
 --
 /opt/sage-4.3.2-linux-64bit-ubuntu_9.10-x86_64-Linux/local/bin/python: 1:
 Syntax error: word unexpected (expecting ))

 Do you have any idea how can I fix this?

You are a bit unwise running Sage as root. The root account should
only be used when necessary.

I would be tempted to look at sysem logs, and see if there are reports
of hardware problems.

 Inside a sage subshell it responds, but:

 r...@eolo:/opt/sage-4.3.2-linux-64bit-ubuntu_9.10-x86_64-Linux# ./sage -sh

 Or otherwise, how can I ensure to begin a new compilation with all the sage
 environment variables erased, in order to make sure they don't interfere
 with this new compilation (it seems to me that this is the reason why now I
 cannot compile sage successfully), do I need to go back a step further and
 reinstall again linux?.

You could try

$ mv $HOME/.sage $HOME/.sage.old

that will ensure Sage is not picking up any old variables.

 Thank you in advance
 Jorge

Your description is a bit incomplete in places (i.e. error messages
which include the words something like imply to me you have not
posted the *exact* error message),

The fact Linux upgraded but then later became unstable makes me
suspect the problem is nothing at all do to with Sage, but rather you
have a hardware problem. If you do reinstall Linux, I'd install the
older version which did not present you problems until you upgraded.

There have been some reports of people finding Sage binaries stops
working after they upgraded the version of gcc on their system. I
believe that might have Ubunta. Sage does not ship with gcc's C or C++
libraries, so if they are changed in an incompatible way, it could
cause problems. But this should not happen if you have rebuilt Sage
from source.

Dave

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Re: [sage-support] Re: can't get notebook running: help!

2010-02-13 Thread David Kirkby
On 13 February 2010 06:44, zsharon zacherysha...@gmail.com wrote:

 Maybe your sage image is different, but for mine, the notebook is
 started with the command notebook (w/o quotes).

It should be

sage: notebook()

 and not

sage: notbook

So the original poster was correct to have the quotes.

Dave

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Re: [sage-support] Re: can't get notebook running: help!

2010-02-13 Thread David Kirkby
On 13 February 2010 11:00, David Kirkby david.kir...@onetel.net wrote:
 On 13 February 2010 06:44, zsharon zacherysha...@gmail.com wrote:

 Maybe your sage image is different, but for mine, the notebook is
 started with the command notebook (w/o quotes).

 It should be

 sage: notebook()

  and not

 sage: notbook

 So the original poster was correct to have the quotes.

 Dave


Sorry, I mean he was correct to use the round brackets ().

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[sage-support] sagemath installs on ubuntu karmic, but abends on simple problem

2010-02-13 Thread Tom Roche
summary: I installed ubuntu package=sagemath (and dependencies) using
aptitude on 2 previously-sage-clean ubuntu karmic boxes. Sage appeared
to install cleanly on both boxes, but a simple problem (that works on
sagenb.org) causes sage to abend similarly on both boxes. How to fix
the current installs, or reinstall more appropriately?

details:

I'm trying to show my girlfriend's daughter how to do some simple math
on her computer. She has UNR 9.10 on i386, I have straight ubuntu 9.10
on amd64. Both are GNOME-based and have default python=2.6. I have
previously installed and used scipy/numpy on my box without problems;
her box is enthought-clean. Both of us are new to sage (I have used
Mathematica some, but only on windows) and both our boxes were
previously sage-clean.

I did one of her homework problems on the web:

http://www.sagenb.org/home/tlroche/0/
 x, y = var('x y')
 e1 = y == 2*x - 2
 e2 = y == x + 2
 solve([e1, e2], x, y)
and got as expected
 [[x == 4, y == 6]]

so I decided to install package=sagemath on her netbook, with

$ sudo aptitude install sagemath

using current default ubuntu repositories. This installed without
error. Since it was such a huge install (postfix?) I restarted
afterward. I then attempted to run the above example from the
commandline and failed miserably. Thinking it might be a box- or
architecture-specific problem, I then installed the same way on
my box and got a very similar error trace, which follows in its
entirety following my .sig.

I'm wondering, is there an easy way to fix these installs?
Alternatively, is there a better way to install sage on ubuntu?
Apologies if this is a FAQ: I saw a buncha posts about ubuntu install
problems, but nothing quite this uncomplicated (i.e. a straight/fresh
install of the sage packages).

Feel free to reply directly to me as well as to the group, and TIA,
Tom Roche tom_ro...@pobox.com-trace follows to end of post--

tlro...@tlrpanp5:~$ sage
--
| SAGE Version 3.0.5, Release Date: 2008-07-11   |
| Type notebook() for the GUI, and license() for information.|
--

sage: x,y=var('x y')
sage: e1=y==2*x-2
Exception pexpect.EOF: EOF() in
'sage.structure.parent._unregister_pair' ignored
Maxima crashed -- automatically restarting.
Exception pexpect.EOF: EOF() in
'sage.structure.parent._unregister_pair' ignored
sage: e2=y==x+2
sage: solve([e1,e2],x,y)
Maxima crashed -- automatically restarting.
ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (865, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (865, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (575, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (356, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (865, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (387, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (805, 0))

ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (785, 0))

---
EOF   Traceback (most recent call
last)

/home/tlroche/ipython console in module()

/usr/lib/python2.5/site-packages/sage/calculus/equations.pyc in
solve(f, *args, **kwds)
   1378 return []
   1379
- 1380 m = maxima(list(f))
   1381
   1382 try:

/usr/lib/python2.5/site-packages/sage/interfaces/maxima.pyc in
__call__(self, x)
375 def __call__(self, x):
376 import sage.rings.all
-- 377 return Expect.__call__(self, x)
378
379 def __init__(self, script_subdirectory=None, logfile=None,
server=None,

/usr/lib/python2.5/site-packages/sage/interfaces/expect.pyc in
__call__(self, x)
954 pass
955 try:
-- 956 return self._coerce_impl(x, use_special=False)
957 except TypeError, msg:
958 try:

/usr/lib/python2.5/site-packages/sage/interfaces/expect.pyc in

Re: [sage-support] sagemath installs on ubuntu karmic, but abends on simple problem

2010-02-13 Thread Alex Ghitza
On Sat, 13 Feb 2010 16:27:22 -0800 (PST), Tom Roche tlro...@gmail.com wrote:
 summary: I installed ubuntu package=sagemath (and dependencies) using
 aptitude on 2 previously-sage-clean ubuntu karmic boxes. Sage appeared
 to install cleanly on both boxes, but a simple problem (that works on
 sagenb.org) causes sage to abend similarly on both boxes. How to fix
 the current installs, or reinstall more appropriately?
 

The version of Sage that's currently packaged in Debian (and hence
Ubuntu) is really really old (think: dinosaur).  I suggest that you
download an Ubuntu binary from 

www.sagemath.org

This will give you Sage 4.3.2, the latest release.  Another option is to
download the sources and build it yourself.



Best,
Alex


-- 
Alex Ghitza -- Lecturer in Mathematics -- The University of Melbourne
-- Australia -- http://www.ms.unimelb.edu.au/~aghitza/

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