Re: [sage-support] Compile Sage 8.9 on Opensuse Tumbleweed:Error building gfortran-7.4.0
Hi, You are correct that in my config.log, there is message saying "gcc- ... will not be installed" : matmsh@euler:~/installed/sages/sage-8.9> grep gcc config.log | grep install configure:7665: === checking whether to install the gcc SPKG === configure:19813: result: gcc-7.4.0 will not be installed (configure check) matmsh@euler:~/installed/sages/sage-8.9> I have done a rebuilt: > make distclean && ./configure > make After the rebuilt, the config.log still contains matmsh@euler:~/installed/sages/sage-8.9> grep gfortran config.log | grep install configure:13595: === checking whether to install the gfortran SPKG === configure:19813: result: gfortran-7.4.0 will not be installed (configure check) matmsh@euler:~/installed/sages/sage-8.9> grep gcc config.log | grep install configure:7665: === checking whether to install the gcc SPKG === configure:19813: result: gcc-7.4.0 will not be installed (configure check) Below are intalled Fortran related rpm packages. matmsh@euler:~/installed/sages/sage-8.9> rpm -qa | grep fortran libgfortran4-7.5.0+r278197-1.1.x86_64 gcc9-fortran-32bit-9.2.1+r275327-1.3.x86_64 libgfortran5-9.2.1+r275327-1.3.x86_64 gcc-fortran-32bit-9-1.6.x86_64 libgfortran5-32bit-9.2.1+r275327-1.3.x86_64 gcc9-fortran-9.2.1+r275327-1.3.x86_64 gcc-fortran-9-1.6.x86_64 matmsh@euler:~/installed/sages/sage-8.9> As Sage is working on my PC, I will leave it as it. Thanks for your comments ! Shing On Wednesday, December 25, 2019 at 5:25:03 PM UTC, Dima Pasechnik wrote: > > On Wed, Dec 25, 2019 at 10:13 PM 'Shing Hing Man' via sage-support > > wrote: > > > > > > Hi, > > Below is a grep near a "neighbourbood" gfortran in my config.log. > > > Thanks. So one sees > > configure:19813: result: gfortran-7.4.0 will not be installed > (configure check) > > which means that Sage will not attempt to build its own gfortran. > I presume you also see > > ... result: gcc-... will not be installed (configure check) > > Are you saying that despite this, an attempt is made to do so? > The only case this could happen is, I think, that you started a build > without gfortran installed, then > installed it, didn't > > make distclean && ./configure > > Dima > > > > > > matmsh@euler:~/installed/sage/logs/pkgs> grep -A 2 -B 2 gfortran > config.log > > configure:5920: checking dependency style of g++ > > configure:6031: result: none > > configure:6099: checking for gfortran > > configure:6115: found /usr/bin/gfortran > > configure:6126: result: gfortran > > configure:6152: checking for Fortran compiler version > > configure:6161: gfortran --version >&5 > > GNU Fortran (SUSE Linux) 9.2.1 20190903 [gcc-9-branch revision 275330] > > Copyright (C) 2019 Free Software Foundation, Inc. > > -- > > > > configure:6172: $? = 0 > > configure:6161: gfortran -v >&5 > > Using built-in specs. > > COLLECT_GCC=gfortran > > COLLECT_LTO_WRAPPER=/usr/lib64/gcc/x86_64-suse-linux/9/lto-wrapper > > OFFLOAD_TARGET_NAMES=hsa:nvptx-none > > -- > > gcc version 9.2.1 20190903 [gcc-9-branch revision 275330] (SUSE Linux) > > configure:6172: $? = 0 > > configure:6161: gfortran -V >&5 > > gfortran: error: unrecognized command line option '-V' > > gfortran: fatal error: no input files > > compilation terminated. > > configure:6172: $? = 1 > > configure:6161: gfortran -qversion >&5 > > gfortran: error: unrecognized command line option '-qversion'; did you > mean '--version'? > > gfortran: fatal error: no input files > > compilation terminated. > > configure:6172: $? = 1 > > configure:6181: checking whether we are using the GNU Fortran compiler > > configure:6194: gfortran -c conftest.F >&5 > > configure:6194: $? = 0 > > configure:6203: result: yes > > configure:6209: checking whether gfortran accepts -g > > configure:6220: gfortran -c -g conftest.f >&5 > > configure:6220: $? = 0 > > configure:6228: result: yes > > -- > > configure:13454: result: no > > configure:13538: checking for Fortran flag needed to accept free-form > source > > configure:13557: gfortran -c -g -O2 conftest.f >&5 > > conftest.f:2:3: > > > > -- > > | 'world.' > > |end > > configure:13557: gfortran -c -g -O2 -ffree-form conftest.f >&5 > > configure:13557: $? = 0 > > configure:13566: result: -ffree-form > > configure:13595: === checking whether to install the gfortran SPKG === > > configure:
Re: [sage-support] Compile Sage 8.9 on Opensuse Tumbleweed:Error building gfortran-7.4.0
Hi, Below is a grep near a "neighbourbood" gfortran in my config.log. matmsh@euler:~/installed/sage/logs/pkgs> grep -A 2 -B 2 gfortran config.log configure:5920: checking dependency style of g++ configure:6031: result: none configure:6099: checking for gfortran configure:6115: found /usr/bin/gfortran configure:6126: result: gfortran configure:6152: checking for Fortran compiler version configure:6161: gfortran --version >&5 GNU Fortran (SUSE Linux) 9.2.1 20190903 [gcc-9-branch revision 275330] Copyright (C) 2019 Free Software Foundation, Inc. -- configure:6172: $? = 0 configure:6161: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib64/gcc/x86_64-suse-linux/9/lto-wrapper OFFLOAD_TARGET_NAMES=hsa:nvptx-none -- gcc version 9.2.1 20190903 [gcc-9-branch revision 275330] (SUSE Linux) configure:6172: $? = 0 configure:6161: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6172: $? = 1 configure:6161: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:6172: $? = 1 configure:6181: checking whether we are using the GNU Fortran compiler configure:6194: gfortran -c conftest.F >&5 configure:6194: $? = 0 configure:6203: result: yes configure:6209: checking whether gfortran accepts -g configure:6220: gfortran -c -g conftest.f >&5 configure:6220: $? = 0 configure:6228: result: yes -- configure:13454: result: no configure:13538: checking for Fortran flag needed to accept free-form source configure:13557: gfortran -c -g -O2 conftest.f >&5 conftest.f:2:3: -- | 'world.' |end configure:13557: gfortran -c -g -O2 -ffree-form conftest.f >&5 configure:13557: $? = 0 configure:13566: result: -ffree-form configure:13595: === checking whether to install the gfortran SPKG === configure:13682: === checking whether to install the git SPKG === configure:13726: checking for git -- configure:19809: result: gf2x-1.2.p0 configure:19809: result: gfan-0.6.2.p1 configure:19813: result: gfortran-7.4.0 will not be installed (configure check) configure:19809: result: giac-1.5.0.63.p0 configure:19809: result: giacpy_sage-0.6.7 -- ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_FC=gfortran ac_cv_prog_ac_ct_OBJC=gcc ac_cv_prog_ac_ct_OBJCXX=g++ -- gfan \ gfan \ gfortran \ gfortran \ giac \ giac \ -- EGREP='/usr/bin/grep -E' EXEEXT='' FC='gfortran' FCFLAGS='-g -O2 -ffree-form' FREETYPE_CFLAGS='' -- ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_FC='gfortran' ac_ct_OBJC='gcc' ac_ct_OBJCXX='g++' -- deps_appnope = $(PYTHON) | pip deps_arb = $(MP_LIBRARY) mpfr flint deps_atlas = gfortran | $(PYTHON) deps_autotools = ncurses git xz deps_awali = $(PYTHON) cmake cython nbconvert ncurses -- deps_gf2x = deps_gfan = $(MP_LIBRARY) cddlib deps_gfortran = | $(MP_LIBRARY) mpfr mpc zlib xz deps_giac = readline libpng $(MP_LIBRARY) mpfr mpfi ntl gsl pari deps_giacpy_sage = $(PYTHON) cython giac cysignals | $(SAGERUNTIME) pip sympy maxima -- deps_notedown = $(PYTHON) setuptools | pip nbformat nbconvert six pandoc_attributes deps_ntl = $(MP_LIBRARY) gf2x deps_numpy = $(PYTHON) $(BLAS) gfortran | setuptools pip pkgconfig cython deps_openblas = gfortran | $(PYTHON) deps_openssl = deps_ore_algebra = $(PYTHON) | setuptools pip -- deps_qepcad = readline saclib deps_qhull = | cmake deps_r = $(BLAS) gfortran iconv readline bzip2 xz pcre curl | pkgconf deps_r_jupyter = | $(STANDARD_PACKAGES) deps_ratpoints = $(MP_LIBRARY) -- deps_scandir = $(PYTHON) | setuptools pip six deps_scipoptsuite = $(MP_LIBRARY) bliss readline | cmake deps_scipy = $(PYTHON) $(BLAS) gfortran numpy | pip deps_scons = $(PYTHON) deps_send2trash = $(PYTHON) | pip -- vers_gf2x = 1.2.p0 vers_gfan = 0.6.2.p1 vers_gfortran = 7.4.0 vers_giac = 1.5.0.63.p0 vers_giacpy_sage = 0.6.7 matmsh@euler:~/installed/sage/logs/pkgs> Shing On Saturday, December 21, 2019 at 1:59:12 PM UTC, Dima Pasechnik wrote: > > On Sat, Dec 21, 2019 at 7:59 PM 'Shing Hing Man' via sage-support > > wrote: > > > > My CPU is AMD Ryzen 2700X, so it is 64bit. > > > > I already have gcc-fortran-9-1.6.x86_64 > > installed when I did the build earlier. > > > > After I install gcc-fortran-32bit-9-1.6.x86_64, and then do a make (on > a new sage-8.9 folder) , the error on gfortran disappeared and sage has > built. > > but why do you need a 32-bit gfortran? Is something getting misconfigured? > > Could you post the output of Sage's config.log if you use the "normal" > gfortran? > > Thanks. > > > > > Thank you for your assistance ! > > > > Shing > > > > > > &
Re: [sage-support] Compile Sage 8.9 on Opensuse Tumbleweed:Error building gfortran-7.4.0
My CPU is AMD Ryzen 2700X, so it is 64bit. I already have gcc-fortran-9-1.6.x86_64 installed when I did the build earlier. After I install gcc-fortran-32bit-9-1.6.x86_64, and then do a make (on a new sage-8.9 folder) , the error on gfortran disappeared and sage has built. Thank you for your assistance ! Shing On Saturday, December 21, 2019 at 10:28:44 AM UTC, Dima Pasechnik wrote: > > Do you have a 32-bit system? > > Anyway, if you could install system's gfortran package it would be a way > out of this. > It seems your system should have gfortran version 7, the package is > called gcc-fortran. > > HTH > Dmitrii > > On Sat, 21 Dec 2019, 17:12 'Shing Hing Man' via sage-support, < > sage-s...@googlegroups.com > wrote: > >> Hi, >> When I compile Sage 8.9 on Opensuse Tumbleweed, there is a problem >> building gfortran-7.4.0 : >> static library. */"; echo "GROUP ( libgcc_s.so.1 -lgcc )" ) > >> ./libgcc_s.so >> /usr/bin/ld: skipping incompatible /usr/lib/../lib/libc.so when searching >> for -lc >> /usr/bin/ld: i386 architecture of input file `/usr/lib/../lib/crti.o' is >> incompatible with i386:x86-64 output >> /usr/bin/ld: i386 architecture of input file `/usr/lib/../lib/crtn.o' is >> incompatible with i386:x86-64 output >> collect2: error: ld returned 1 exit status >> make[6]: *** [Makefile:982: libgcc_s.so] Error 1 >> make[6]: Leaving directory >> '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build/x86_64-pc-linux-gnu/libgcc' >> make[5]: *** [Makefile:11907: all-target-libgcc] Error 2 >> make[5]: Leaving directory >> '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build' >> make[4]: *** [Makefile:878: all] Error 2 >> make[4]: Leaving directory >> '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build' >> >> >> Error building gfortran-7.4.0 >> >> >> >> I ran >> ./configure >> MAKE='make -12' make >> >> Thanks in advance for any assistance ! >> Shing >> >> -- >> You received this message because you are subscribed to the Google Groups >> "sage-support" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to sage-s...@googlegroups.com . >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/sage-support/4f8bac3b-7301-449b-af36-8cdf22569b32%40googlegroups.com >> >> <https://groups.google.com/d/msgid/sage-support/4f8bac3b-7301-449b-af36-8cdf22569b32%40googlegroups.com?utm_medium=email_source=footer> >> . >> > -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-support/eefa66a3-e921-4c4b-9b75-5e790c48ac4d%40googlegroups.com.
[sage-support] Compile Sage 8.9 on Opensuse Tumbleweed:Error building gfortran-7.4.0
Hi, When I compile Sage 8.9 on Opensuse Tumbleweed, there is a problem building gfortran-7.4.0 : static library. */"; echo "GROUP ( libgcc_s.so.1 -lgcc )" ) > ./libgcc_s.so /usr/bin/ld: skipping incompatible /usr/lib/../lib/libc.so when searching for -lc /usr/bin/ld: i386 architecture of input file `/usr/lib/../lib/crti.o' is incompatible with i386:x86-64 output /usr/bin/ld: i386 architecture of input file `/usr/lib/../lib/crtn.o' is incompatible with i386:x86-64 output collect2: error: ld returned 1 exit status make[6]: *** [Makefile:982: libgcc_s.so] Error 1 make[6]: Leaving directory '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build/x86_64-pc-linux-gnu/libgcc' make[5]: *** [Makefile:11907: all-target-libgcc] Error 2 make[5]: Leaving directory '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build' make[4]: *** [Makefile:878: all] Error 2 make[4]: Leaving directory '/home/matmsh/installed/sages/sage-8.9/local/var/tmp/sage/build/gfortran-7.4.0/gcc-build' Error building gfortran-7.4.0 I ran ./configure MAKE='make -12' make Thanks in advance for any assistance ! Shing -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-support/4f8bac3b-7301-449b-af36-8cdf22569b32%40googlegroups.com.
