[Bug 1075910] [NEW] Please update ugene to the latest version 1.11.3
Public bug reported: It would be great if the package is updated to the latest version. The ppa-archive contains the successfully built packages for precise: https://launchpad.net/~iefremov/+archive/ppa/+packages ** Affects: ugene (Ubuntu) Importance: Undecided Status: New ** Tags: upgrade-software-version -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/1075910 Title: Please update ugene to the latest version 1.11.3 To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/ugene/+bug/1075910/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 820903] Re: Please update ugene to the latest version 1.9.5
Thanks, then we should be fine. -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/820903 Title: Please update ugene to the latest version 1.9.5 To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/ugene/+bug/820903/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 820903] Re: Please update ugene to the latest version 1.9.5
I see that ugene is now linked to the sqlite3 package. However, ugene requires sqlite to be built with certain parameters (see libs_3rdparty/sqlite3.pri): DEFINES+=SQLITE_ENABLE_COLUMN_METADATA DEFINES+=SQLITE_ENABLE_RTREE DEFINES+=THREADSAFE Does that work for system sqlite? -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/820903 Title: Please update ugene to the latest version 1.9.5 To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/ugene/+bug/820903/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] Re: Please update ugene to the latest version 1.9.1
Thanks! -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] Re: Please update ugene to the latest version 1.9.1
build fine in ppa: https://launchpad.net/~iefremov/+archive/ppa/+packages -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] Re: Please update ugene to the latest version 1.9.1
** Attachment added: "ugene_1.9.1+repack-0ubuntu1.debian.tar.gz" https://bugs.launchpad.net/ubuntu/+source/ugene/+bug/717169/+attachment/1843457/+files/ugene_1.9.1%2Brepack-0ubuntu1.debian.tar.gz ** Changed in: ugene (Ubuntu) Status: New => Confirmed -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] Re: Please update ugene to the latest version 1.9.1
Sorry, wrong orig.tar.gz ** Attachment added: "ugene_1.9.1+repack.orig.tar.gz" https://bugs.launchpad.net/ubuntu/+source/ugene/+bug/717169/+attachment/1843447/+files/ugene_1.9.1%2Brepack.orig.tar.gz -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] Re: Please update ugene to the latest version 1.9.1
** Attachment added: "ugene_1.9.1.orig.tar.gz" https://bugs.launchpad.net/bugs/717169/+attachment/1843435/+files/ugene_1.9.1.orig.tar.gz -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 717169] [NEW] Please update ugene to the latest version 1.9.1
Public bug reported: Binary package hint: ugene The latest version presented in Ubuntu repositories is 1.7.1 so it would be great to update it to the latest one. ** Affects: ugene (Ubuntu) Importance: Undecided Status: New -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/717169 Title: Please update ugene to the latest version 1.9.1 -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 657798] [NEW] [needs-packaging]libgala
Public bug reported: [needs-packaging] libgala Fortran library for solving linear algebra problems with guaranteed accuracy. URL: http://code.google.com/p/libgala/ License: GPLv3 More info about the library (in Russian): http://fap.sbras.ru/node/571 ** Affects: ubuntu Importance: Undecided Status: New ** Tags: needs-packaging -- [needs-packaging]libgala https://bugs.launchpad.net/bugs/657798 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
Works for me. -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
xtknight, I requested the Stable Release Update according to the policy, but looks like nobody cares. -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 606642] Re: Please update this package to 1.7.1
Hi Stefano and Bhavani, surely, the issue with manpage will be fixed in the next release of UGENE, which is planned for august 2010. Thanks for updating the package. -- Please update this package to 1.7.1 https://bugs.launchpad.net/bugs/606642 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
** Description changed: Binary package hint: ugene When I start ugene I get: /usr/lib/ugene/ugene: symbol lookup error: /usr/lib/ugene/libcore.so.1: undefined symbol: _ZN9QHashData13detach_helperEPFvPNS_4NodeEPvEPFvS1_Ei ProblemType: Bug DistroRelease: Ubuntu 10.04 Package: ugene 1.5.2+repack-0ubuntu1 ProcVersionSignature: Ubuntu 2.6.32-14.20-generic Uname: Linux 2.6.32-14-generic x86_64 NonfreeKernelModules: nvidia Architecture: amd64 Date: Sun Apr 18 22:52:56 2010 InstallationMedia: Ubuntu 10.04 "Lucid Lynx" - Alpha amd64 (20100224.1) ProcEnviron: PATH=(custom, user) LANG=ru_RU.utf8 SHELL=/bin/bash SourcePackage: ugene + + + Update (information for SRU): + + This bug makes the whole package totally unusable, since the program can't even start. + TEST CASE: simply start the ugene executable. It will fail with symbol lookup error. + + No patch is required since this is a build process issue. Simple rebuild of the package with the current Qt version will fix the bug. + The bug is caused by building the package with Qt 4.6.0beta1 and using it with stable Qt 4.6.2 ** Changed in: ugene (Ubuntu) Status: Confirmed => Fix Released -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
** Changed in: ugene (Ubuntu) Status: New => Confirmed -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
We are working on this problem. This bug is caused by updated Qt in Lucid. And yes, the most convenient way to workaround this is to install updated UGENE from our PPA https://launchpad.net/~iefremov/+archive/ppa We will prepare Lucid version in the next few days. -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 566146] Re: ugene crashes on start with symbol lookup error
Thanks for report, we will try to reproduce the problem. ** Changed in: ugene (Ubuntu) Assignee: (unassigned) => Ivan Efremov (iefremov) -- ugene crashes on start with symbol lookup error https://bugs.launchpad.net/bugs/566146 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 500781] Re: input devices are temporarily lost
anything else? ** Attachment added: "dmesg.log" http://launchpadlibrarian.net/37247630/dmesg.log -- input devices are temporarily lost https://bugs.launchpad.net/bugs/500781 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 500781] Re: input devices are temporarily lost
** Attachment added: "Xorg.0.log" http://launchpadlibrarian.net/37225053/Xorg.0.log ** Attachment added: "Dependencies.txt" http://launchpadlibrarian.net/37225054/Dependencies.txt -- input devices are temporarily lost https://bugs.launchpad.net/bugs/500781 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 500781] [NEW] input devices are temporarily lost
Public bug reported: Binary package hint: xorg at intervals input through a keyboard and touchpad stops working and recovers only after 2-3 minutes. it happens every 10-20 minutes. Ubuntu 9.10, xorg 7.4+3ubuntu10, hal 0.5.13-1ubuntu8, udev 147~-6.1, kernel 2.6.31-16-generic ProblemType: Bug Architecture: i386 Date: Sun Dec 27 21:45:46 2009 DistroRelease: Ubuntu 9.10 InstallationMedia: Ubuntu 9.10 "Karmic Koala" - Release i386 (20091028.5) NonfreeKernelModules: wl nvidia Package: hal 0.5.13-1ubuntu8 ProcEnviron: PATH=(custom, user) LANG=ru_RU.UTF-8 SHELL=/bin/bash ProcVersionSignature: Ubuntu 2.6.31-16.53-generic SourcePackage: hal Uname: Linux 2.6.31-16-generic i686 XsessionErrors: (gnome-settings-daemon:2130): GLib-CRITICAL **: g_propagate_error: assertion `src != NULL' failed (gnome-settings-daemon:2130): GLib-CRITICAL **: g_propagate_error: assertion `src != NULL' failed (nautilus:2229): Eel-CRITICAL **: eel_preferences_get_boolean: assertion `preferences_is_initialized ()' failed (polkit-gnome-authentication-agent-1:2249): GLib-CRITICAL **: g_once_init_leave: assertion `initialization_value != 0' failed (gnome-panel:2225): Gdk-WARNING **: /build/buildd/gtk+2.0-2.18.3/gdk/x11/gdkdrawable-x11.c:952 drawable is not a pixmap or window ** Affects: xorg (Ubuntu) Importance: Undecided Status: New ** Tags: apport-bug i386 -- input devices are temporarily lost https://bugs.launchpad.net/bugs/500781 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 486583] Re: Please update ugene to the latest version 1.5.2
Successful PPA build is here, for jaunty: https://launchpad.net/~iefremov/+archive/ppa/+packages Bhavani, please update copyright information according to http://launchpadlibrarian.net/32177014/ugene_1.5.2%2Brepack-0ubuntu1~ppa1~jaunty1.diff.gz -- Please update ugene to the latest version 1.5.2 https://bugs.launchpad.net/bugs/486583 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 397779] Re: update ugene to the latest 1.5.0 version
diff.gz ** Attachment added: "ugene_1.5.0+repack-0ubuntu1.diff.gz" http://launchpadlibrarian.net/28872815/ugene_1.5.0%2Brepack-0ubuntu1.diff.gz -- update ugene to the latest 1.5.0 version https://bugs.launchpad.net/bugs/397779 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 397779] [NEW] update ugene to the latest 1.5.0 version
Public bug reported: Binary package hint: ugene >From upstream website: July 10, 2009 UGENE 1.5 released New plugins: HMM3 - modern set of tools for HMM profiles build and search, based on HMMER 3.0b2 Primer3 - integration of the primer3 tool for PCR primers design GOR IV and PSIPRED - protein secondary structure prediction tools (feel free to check corresponding documentation ) Introduced congene - command-line version of UGENE which allows user to launch workflows from the command-line New features and bug fixes: Major update for Biostruct3D plugin: molecular surface visualization (please check plugin documentation) Loading remote documents from PDB, Uniprot, Swissprot 'Create document from text' feature Annotations editing significantly improved Some critical bugs in Qt 4.5 workarounded Added some stability fixes for parallel MUSCLE Lots of minor fixes and improvements ** Affects: ugene (Ubuntu) Importance: Undecided Status: New -- update ugene to the latest 1.5.0 version https://bugs.launchpad.net/bugs/397779 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 397779] Re: update ugene to the latest 1.5.0 version
** Attachment added: "ugene_1.5.0+repack.orig.tar.gz" http://launchpadlibrarian.net/28872773/ugene_1.5.0%2Brepack.orig.tar.gz -- update ugene to the latest 1.5.0 version https://bugs.launchpad.net/bugs/397779 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 319917] Re: [needs-packaging]ugene
http://revu.ubuntuwire.com/details.py?package=ugene ** Changed in: ubuntu Assignee: (unassigned) => Ivan Efremov (iefremov) Status: New => In Progress -- [needs-packaging]ugene https://bugs.launchpad.net/bugs/319917 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
[Bug 319917] [NEW] [needs-packaging]ugene
Public bug reported: Integrated bioinformatics toolkit. More detailed information can be found here: http://ugene.unipro.ru http://en.wikipedia.org/wiki/UGENE ** Affects: ubuntu Importance: Undecided Assignee: Ivan Efremov (iefremov) Status: In Progress -- [needs-packaging]ugene https://bugs.launchpad.net/bugs/319917 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
