[Bug 1640171] Re: Molecules are not rendered, black screen

2017-09-12 Thread Mike
Any chance the maintainer the use the fix from the debian package? I
have the same issue.

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  Molecules are not rendered, black screen

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[Bug 1640171] Re: Molecules are not rendered, black screen

2017-07-08 Thread Michael Banck
This got fixed in the Debian package 1.2.0-2.

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  Molecules are not rendered, black screen

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[Bug 1640171] Re: Molecules are not rendered, black screen

2017-06-26 Thread xemard.nicolas
For information, same problem too with latest Debian package (cat 
/etc/debian_version : 9.0)
avogadro --version
"Avogadro version:  1.2.0   Git:
LibAvogadro version:1.2.0   Git:
Locale:  "fr_FR" 
Translation successfully loaded. 
Avogadro:   1.2.0 (Hachage )
LibAvogadro:1.2.0 (Hachage )
Qt: 4.8.7
OpenBabel:  2.3.2

I also try white background with no success
Sometimes, depending on the rotation, molecules appear or disappear ...


** Attachment added: "molecules appear or disappear"
   
https://bugs.launchpad.net/ubuntu/+source/avogadro/+bug/1640171/+attachment/4903437/+files/Avogadro_bug.png

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[Bug 1640171] Re: Molecules are not rendered, black screen

2017-04-24 Thread Carlos Sevcik
Same problem with Ubuntu 17.04, it renders Avogadro useless

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[Bug 1640171] Re: Molecules are not rendered, black screen

2017-04-17 Thread luthfan
I'm having the same issue too (Ubuntu 16.10 Yakkety)

lirfana@velociraptor:~$ avogadro
"Avogadro version:  1.1.1   Git:
LibAvogadro version:1.1.1   Git:" 
Locale:  "en_US" 
Libavogadro translations not found. 
System has OpenGL support. 
About to test OpenGL capabilities. 
OpenGL capabilities found: 
Double Buffering.
Direct Rendering.
Antialiasing.
Loading plugins: "/usr/bin/../lib/avogadro/1_1" 
Searching for plugins in "/usr/lib/avogadro/1_1" 
Searching for plugins in "/usr/lib/avogadro/1_1/colors" 
Searching for plugins in "/usr/lib/avogadro/1_1/engines" 
Searching for plugins in "/usr/lib/avogadro/1_1/extensions" 
Searching for plugins in "/usr/lib/avogadro/1_1/tools" 
Loading plugins: "/home/lirfana/.avogadro/1_1/plugins" 
Settings are missing for the next engines: () 
QStackedLayout::setCurrentWidget: Widget 0x55fae2836a80 not contained in stack
dev warning: Extension "GAMESS" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Orbitals" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Python Terminal" is using a deprecated DockWidget 
loading method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Vibration" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
GLWidget initialisation... 
GLSL support enabled, OpenGL 2.0 support confirmed. 
GLWidget initialised... 
createObjects() 
OpenGL extension GL_ARB_texture_rectangle is present. 
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: cHRM: invalid chromaticities
^CQt has caught an exception thrown from an event handler. Throwing
exceptions from an event handler is not supported in Qt. You must
reimplement QApplication::notify() and catch all exceptions there.

Thanks.

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-12-31 Thread Ramsus Langaard
Forgot the rest of output from when I exited the program:

Qt has caught an exception thrown from an event handler. Throwing
exceptions from an event handler is not supported in Qt. You must
reimplement QApplication::notify() and catch all exceptions there.

-r  :-)

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-12-31 Thread Ramsus Langaard
I'm having the same problem. Once I could barely se some atoms
(extremely dark gray on black). Changed the background color to light
gray, but to no avail. Here's my output:

rasmus@rasmus-Lenovo-Z710:~$ avogadro
"Avogadro version:  1.1.1   Git:
LibAvogadro version:1.1.1   Git:" 
Locale:  "nb_NO" 
Translation successfully loaded. 
System has OpenGL support. 
About to test OpenGL capabilities. 
OpenGL capabilities found: 
Double Buffering.
Direct Rendering.
Antialiasing.
void DBusMenuExporterPrivate::addAction(QAction*, int): Already tracking action 
"" under id 62 
void DBusMenuExporterPrivate::addAction(QAction*, int): Already tracking action 
"" under id 63 
Loading plugins: "/usr/bin/../lib/avogadro/1_1" 
Searching for plugins in "/usr/lib/avogadro/1_1" 
Searching for plugins in "/usr/lib/avogadro/1_1/colors" 
Searching for plugins in "/usr/lib/avogadro/1_1/engines" 
Searching for plugins in "/usr/lib/avogadro/1_1/extensions" 
Searching for plugins in "/usr/lib/avogadro/1_1/tools" 
Loading plugins: "/home/rasmus/.avogadro/1_1/plugins" 
Settings are missing for the next engines: () 
QStackedLayout::setCurrentWidget: Widget 0x55bb862338e0 not contained in stack
dev warning: Extension "GAMESS" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Orbitals" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Python-terminal" is using a deprecated DockWidget 
loading method. See Extension::dockWidgets() documentation. 
dev warning: Extension "Vibrasjon" is using a deprecated DockWidget loading 
method. See Extension::dockWidgets() documentation. 
GLWidget initialisation... 
GLSL support enabled, OpenGL 2.0 support confirmed. 
GLWidget initialised... 
createObjects() 
OpenGL extension GL_ARB_texture_rectangle is present. 
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: iCCP: known incorrect sRGB profile
libpng warning: cHRM: invalid chromaticities

Chromaticities? Please help!

-r  :-)

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-12-31 Thread Ramsus Langaard
I'm using this btw:

rasmus@rasmus-Lenovo-Z710:~$ uname -a
Linux rasmus-Lenovo-Z710 4.8.0-34-generic #36-Ubuntu SMP Wed Dec 21 17:24:18 
UTC 2016 x86_64 x86_64 x86_64 GNU/Linux

-r  :-)

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-12-26 Thread Akshay Sridhar
Yes. The update to Ubuntu 16.10 broke something for me too.

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-11-24 Thread Rodrigo Azevedo
I have exactly the same problem after upgrading from Ubuntu 16.04 to Ubuntu 
16.10;
Verified with Ubuntu default and Unity 8 as well as Nvidia and Intel drivers.

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[Bug 1640171] Re: Molecules are not rendered, black screen

2016-11-24 Thread Launchpad Bug Tracker
Status changed to 'Confirmed' because the bug affects multiple users.

** Changed in: avogadro (Ubuntu)
   Status: New => Confirmed

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