Re: IllegalArgumentException UnsatisfiedLinkError snappy-1.1.2 spark-shell error

2016-02-15 Thread Paolo Villaflores
Yes, I have sen that. But java.io.tmpdir has a default definition in
linux--it is /tmp.



On Tue, Feb 16, 2016 at 2:17 PM, Ted Yu <yuzhih...@gmail.com> wrote:

> Have you seen this thread ?
>
>
> http://search-hadoop.com/m/q3RTtW43zT1e2nfb=Re+ibsnappyjava+so+failed+to+map+segment+from+shared+object
>
> On Mon, Feb 15, 2016 at 7:09 PM, Paolo Villaflores <
> pbvillaflo...@gmail.com> wrote:
>
>>
>> Hi,
>>
>>
>>
>> I am trying to run spark 1.6.0.
>>
>> I have previously just installed a fresh instance of hadoop 2.6.0 and
>> hive 0.14.
>>
>> Hadoop, mapreduce, hive and beeline are working.
>>
>> However, as soon as I run `sc.textfile()` within spark-shell, it returns
>> an error:
>>
>>
>> $ spark-shell
>> Welcome to
>>     __
>>  / __/__  ___ _/ /__
>> _\ \/ _ \/ _ `/ __/  '_/
>>/___/ .__/\_,_/_/ /_/\_\   version 1.6.0
>>   /_/
>>
>> Using Scala version 2.10.5 (Java HotSpot(TM) 64-Bit Server VM, Java
>> 1.7.0_67)
>> Type in expressions to have them evaluated.
>> Type :help for more information.
>> Spark context available as sc.
>> SQL context available as sqlContext.
>>
>> scala> val textFile = sc.textFile("README.md")
>> java.lang.IllegalArgumentException: java.lang.UnsatisfiedLinkError:
>> /tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
>> /tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
>> failed to map segment from shared object: Operation not permitted
>> at
>> org.apache.spark.io.SnappyCompressionCodec.(CompressionCodec.scala:156)
>> at
>> sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
>> at
>> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
>> at
>> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
>> at
>> java.lang.reflect.Constructor.newInstance(Constructor.java:526)
>> at
>> org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:72)
>> at
>> org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:65)
>> at org.apache.spark.broadcast.TorrentBroadcast.org
>> $apache$spark$broadcast$TorrentBroadcast$$setConf(TorrentBroadcast.scala:73)
>> at
>> org.apache.spark.broadcast.TorrentBroadcast.(TorrentBroadcast.scala:80)
>> at
>> org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
>> at
>> org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
>> at
>> org.apache.spark.SparkContext.broadcast(SparkContext.scala:1326)
>> at
>> org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1014)
>> at
>> org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1011)
>> at
>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
>> at
>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
>> at
>> org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
>> at
>> org.apache.spark.SparkContext.hadoopFile(SparkContext.scala:1011)
>> at
>> org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:832)
>> at
>> org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:830)
>> at
>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
>> at
>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
>> at
>> org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
>> at
>> org.apache.spark.SparkContext.textFile(SparkContext.scala:830)
>> at
>> $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:27)
>> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:32)
>> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:34)
>> at $iwC$$iwC$$iwC$$iwC$$iwC.(:36)
>> at $iwC$$iwC$$iwC$$iwC.(:38)
>> at $iwC$$iwC$$iwC.(:40)
>> at $iwC$$iwC.(:42)
>> at $iwC.(:44)
>> at (:46)
>> at .(:50)
>> 

IllegalArgumentException UnsatisfiedLinkError snappy-1.1.2 spark-shell error

2016-02-15 Thread Paolo Villaflores
Hi,



I am trying to run spark 1.6.0.

I have previously just installed a fresh instance of hadoop 2.6.0 and hive
0.14.

Hadoop, mapreduce, hive and beeline are working.

However, as soon as I run `sc.textfile()` within spark-shell, it returns an
error:


$ spark-shell
Welcome to
    __
 / __/__  ___ _/ /__
_\ \/ _ \/ _ `/ __/  '_/
   /___/ .__/\_,_/_/ /_/\_\   version 1.6.0
  /_/

Using Scala version 2.10.5 (Java HotSpot(TM) 64-Bit Server VM, Java
1.7.0_67)
Type in expressions to have them evaluated.
Type :help for more information.
Spark context available as sc.
SQL context available as sqlContext.

scala> val textFile = sc.textFile("README.md")
java.lang.IllegalArgumentException: java.lang.UnsatisfiedLinkError:
/tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
/tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
failed to map segment from shared object: Operation not permitted
at
org.apache.spark.io.SnappyCompressionCodec.(CompressionCodec.scala:156)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at
java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at
org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:72)
at
org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:65)
at org.apache.spark.broadcast.TorrentBroadcast.org
$apache$spark$broadcast$TorrentBroadcast$$setConf(TorrentBroadcast.scala:73)
at
org.apache.spark.broadcast.TorrentBroadcast.(TorrentBroadcast.scala:80)
at
org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
at
org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
at
org.apache.spark.SparkContext.broadcast(SparkContext.scala:1326)
at
org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1014)
at
org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1011)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at
org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
at
org.apache.spark.SparkContext.hadoopFile(SparkContext.scala:1011)
at
org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:832)
at
org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:830)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at
org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
at
org.apache.spark.SparkContext.textFile(SparkContext.scala:830)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:27)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:32)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.(:34)
at $iwC$$iwC$$iwC$$iwC$$iwC.(:36)
at $iwC$$iwC$$iwC$$iwC.(:38)
at $iwC$$iwC$$iwC.(:40)
at $iwC$$iwC.(:42)
at $iwC.(:44)
at (:46)
at .(:50)
at .()
at .(:7)
at .()
at $print()
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at
org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
at
org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
at
org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
at
org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
at
org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
at
org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
at
org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
at
org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
at
org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
at
org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
at org.apache.spark.repl.SparkILoop.org