[gridengine users] new error I've never seen before! ("sge_shepherd won't run -- dynamic library missing?")

[Chris Dagdigian]

Sorry this is exciting, I've been using SGE forever and rarely see 
something new.


However I see this now on AWS trying to run a new exechost on a centos 
box that I bound to an aws cfncluster grid:


Starting execution daemon. Please wait ...
sge_shepherd won't run -- dynamic library missing?


Anyone seen this before? Google is no help as to what library may 
actually be missing ...



Chris


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Re: [gridengine users] new error I've never seen before! ("sge_shepherd won't run -- dynamic library missing?")

[Ian Kaufman]

ldd is your friend :)

ldd `which sge_shepherd`

Ian

On Wed, Aug 9, 2017 at 9:47 AM, Chris Dagdigian  wrote:

> Sorry this is exciting, I've been using SGE forever and rarely see
> something new.
>
> However I see this now on AWS trying to run a new exechost on a centos box
> that I bound to an aws cfncluster grid:
>
> Starting execution daemon. Please wait ...
> sge_shepherd won't run -- dynamic library missing?
>
>
> Anyone seen this before? Google is no help as to what library may actually
> be missing ...
>
>
> Chris
>
>
> ___
> users mailing list
> users@gridengine.org
> https://gridengine.org/mailman/listinfo/users
>



-- 
Ian Kaufman
Research Systems Administrator
UC San Diego, Jacobs School of Engineering ikaufman AT ucsd DOT edu
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Re: [gridengine users] new error I've never seen before! ("sge_shepherd won't run -- dynamic library missing?")

[Chris Dagdigian]

To answer my own question:


/opt/sge/bin/lx-amd64/sge_shepherd
/opt/sge/bin/lx-amd64/sge_shepherd: error while loading shared 
libraries: libhwloc.so.5: cannot open shared object file: No such file 
or directory




The answer is the hwloc-1.5-3.el6_5.x86_64 RPM ...

Chris





Chris Dagdigian 
August 9, 2017 at 12:47 PM
Sorry this is exciting, I've been using SGE forever and rarely see 
something new.


However I see this now on AWS trying to run a new exechost on a centos 
box that I bound to an aws cfncluster grid:


Starting execution daemon. Please wait ...
sge_shepherd won't run -- dynamic library missing?


Anyone seen this before? Google is no help as to what library may 
actually be missing ...



Chris




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