[Pw_forum] Factor M in electron-phonon coupling matrix element

2014-05-17 Thread Sridhar Sadasivam
Dear QE users and developers,

I am writing to ask for a small clarification in the formula that defines
the electron-phonon coupling matrix element (Equation 1 in the phonon user
guide:
http://www.quantum-espresso.org/wp-content/uploads/Doc/ph_user_guide.pdf )

What is 'M' in Equation 1? Is it the total mass of the unit cell?

Thanks,
Sridhar
Purdue University
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[Pw_forum] Conergence Delay

2014-05-17 Thread Elliot Menkah
Hello Everyone,
I have this relax calculation running on 16 cores. Its been running for 
the past 73 days. Below is the status of the job when i open the output 
file.
Can anyone please help me understand the interpretation as to when it 
would converge. Especially the non-human-readable iteration number.

iteration #*** ecut=60.00 Ry beta=0.20
  Davidson diagonalization with overlap
  ethr =  4.68E-11,  avg # of iterations =  3.4

  negative rho (up, down):  0.229E-04 0.227E-04

  total cpu time spent up to now is  5498418.9 secs

  total energy  =   -3906.86845896 Ry
  Harris-Foulkes estimate   =   -3906.86845896 Ry
  estimated scf accuracy<   0.0077 Ry


Kind Regards,

Elliot

-- 
Elliot Sarpong Menkah
Graduate Student - Computational Chemistry / Computational Material Science.
Theoretical and Computational Chemistry
Dept. of Chemistry
Kwame Nkrumah University of Science and Technology (KNUST),
Private Mail Bag,
Kumasi,
Ghana.
Mobile:+233-243-055-717,+233-202-929-058


Alt. Email: elliotsmenkah at gmail.com
 elliotsmenkah at hotmail.com

webpage: 
http://archive.knust.edu.gh/pages/sections.php?siteid=chemistry&mid=806&sid=2754



[Pw_forum] Pseudopotential combination

2014-05-17 Thread Elliot Menkah
Thank you Axel.


On 05/17/2014 02:46 PM, Axel Kohlmeyer wrote:
>
>
>
> On Sat, May 17, 2014 at 9:56 AM, Elliot Menkah 
> mailto:elliotsmenkah at yahoo.com>> wrote:
>
> Hello Everyone,
>
> I'm making an adsorption study of carbon monoxide(CO) on pure
> nickel(Ni) surfaces.
> I use the pseudopotential Ni.pbe-nd-rrkjus.UPF to optimized the
> pure nickel system.
> Is it wrong to use C.pbe-van_ak.UPF for carbon and
> O.pbe-van_ak.UPF for the oxygen rather than using C.pbe-rrkjus.UPF
> and O.pbe-rrkjus.UPF
>
>
> no.
>
> When I use the *pbe-van_ak.UPF* to optimize the CO separately, I
> get an energy of *-75.5429425135* Ry whereas *pbe-rrkjus.UPF*
> gives me an energy of *-75.1901795049* Ry.
>
>
> absolute energies have no meaning in pseudopotential calculations.
>
>
> In consideration of the energetics and stability, I want to go in
> for the pbe-van_ak.UPF for the system of CO on Ni surface. Is it
> wrong please?
>
>
> no.
>
>
>
> Kind Regards,
>
> Elliot
>
> -- 
> Elliot Sarpong Menkah
> Graduate Student - Computational Chemistry / Computational Material 
> Science.
> Theoretical and Computational Chemistry
> Dept. of Chemistry
> Kwame Nkrumah University of Science and Technology (KNUST),
> Private Mail Bag,
> Kumasi,
> Ghana.
> Mobile:+233-243-055-717,+233-202-929-058
>
>
> Alt. Email:elliotsmenkah at gmail.com  <mailto:elliotsmenkah at gmail.com>
>  elliotsmenkah at hotmail.com  <mailto:elliotsmenkah at 
> hotmail.com>
>
> 
> webpage:http://archive.knust.edu.gh/pages/sections.php?siteid=chemistry&mid=806&sid=2754
>
>
> ___
> Pw_forum mailing list
> Pw_forum at pwscf.org <mailto:Pw_forum at pwscf.org>
> http://pwscf.org/mailman/listinfo/pw_forum
>
>
>
>
> -- 
> Dr. Axel Kohlmeyer akohlmey at gmail.com <mailto:akohlmey at gmail.com> 
> http://goo.gl/1wk0
> College of Science & Technology, Temple University, Philadelphia PA, USA
> International Centre for Theoretical Physics, Trieste. Italy.
>
>
> ___
> Pw_forum mailing list
> Pw_forum at pwscf.org
> http://pwscf.org/mailman/listinfo/pw_forum


-- 
Elliot Sarpong Menkah
Graduate Student - Computational Chemistry / Computational Material Science.
Theoretical and Computational Chemistry
Dept. of Chemistry
Kwame Nkrumah University of Science and Technology (KNUST),
Private Mail Bag,
Kumasi,
Ghana.
Mobile:+233-243-055-717,+233-202-929-058


Alt. Email: elliotsmenkah at gmail.com
 elliotsmenkah at hotmail.com

webpage: 
http://archive.knust.edu.gh/pages/sections.php?siteid=chemistry&mid=806&sid=2754

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[Pw_forum] Pseudopotential combination

2014-05-17 Thread Elliot Menkah
Hello Everyone,

I'm making an adsorption study of carbon monoxide(CO) on pure nickel(Ni) 
surfaces.
I use the pseudopotential Ni.pbe-nd-rrkjus.UPF to optimized the pure 
nickel system.
Is it wrong to use C.pbe-van_ak.UPF for carbon and O.pbe-van_ak.UPF for 
the oxygen rather than using C.pbe-rrkjus.UPF and O.pbe-rrkjus.UPF
When I use the *pbe-van_ak.UPF* to optimize the CO separately, I get an 
energy of *-75.5429425135* Ry whereas *pbe-rrkjus.UPF* gives me an 
energy of *-75.1901795049* Ry.

In consideration of the energetics and stability, I want to go in for 
the pbe-van_ak.UPF for the system of CO on Ni surface. Is it wrong please?


Kind Regards,

Elliot

-- 
Elliot Sarpong Menkah
Graduate Student - Computational Chemistry / Computational Material Science.
Theoretical and Computational Chemistry
Dept. of Chemistry
Kwame Nkrumah University of Science and Technology (KNUST),
Private Mail Bag,
Kumasi,
Ghana.
Mobile:+233-243-055-717,+233-202-929-058


Alt. Email: elliotsmenkah at gmail.com
 elliotsmenkah at hotmail.com

webpage: 
http://archive.knust.edu.gh/pages/sections.php?siteid=chemistry&mid=806&sid=2754

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[Pw_forum] Pseudopotential combination

2014-05-17 Thread Axel Kohlmeyer
On Sat, May 17, 2014 at 9:56 AM, Elliot Menkah wrote:

>  Hello Everyone,
>
> I'm making an adsorption study of carbon monoxide(CO) on pure nickel(Ni)
> surfaces.
> I use the pseudopotential Ni.pbe-nd-rrkjus.UPF to optimized the pure
> nickel system.
> Is it wrong to use C.pbe-van_ak.UPF for carbon and  O.pbe-van_ak.UPF for
> the oxygen rather than using C.pbe-rrkjus.UPF and O.pbe-rrkjus.UPF
>

?no.?


> When I use the *pbe-van_ak.UPF* to optimize the CO separately, I get an
> energy of *-75.5429425135* Ry whereas *pbe-rrkjus.UPF* gives me an energy
> of *-75.1901795049* Ry.
>

?absolute energies have no meaning in pseudopotential calculations.


>
> In consideration of the energetics and stability, I want to go in for the
> pbe-van_ak.UPF for the system of CO on Ni surface. Is it wrong please?
>

?no.?



>
>
> Kind Regards,
>
> Elliot
>
> --
> Elliot Sarpong Menkah
> Graduate Student - Computational Chemistry / Computational Material Science.
> Theoretical and Computational Chemistry
> Dept. of Chemistry
> Kwame Nkrumah University of Science and Technology (KNUST),
> Private Mail Bag,
> Kumasi,
> Ghana.
> Mobile:+233-243-055-717,+233-202-929-058
>
>
> Alt. Email: elliotsmenkah at gmail.com
> elliotsmenkah at hotmail.com
>
> webpage: 
> http://archive.knust.edu.gh/pages/sections.php?siteid=chemistry&mid=806&sid=2754
>
>
> ___
> Pw_forum mailing list
> Pw_forum at pwscf.org
> http://pwscf.org/mailman/listinfo/pw_forum
>



-- 
Dr. Axel Kohlmeyer  akohlmey at gmail.com  http://goo.gl/1wk0
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.
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