Re: [QE-users] Too many r-vectors error while running cp.x

2019-03-18 Thread 대학원생
I changed the way to specifiy the cell, erasing the CELL_PARAMETERS block.

   ibrav = 14,
   celldm(1) = 56.7 ,
   celldm(2) = 1.0 ,
   celldm(3) = 1.0 ,
   celldm(4) = 0.0 ,
   celldm(5) = 0.0 ,
   celldm(6) = 0.0 ,

It solved the problem.

Thank you for your advice.

Daeho Han





보낸 사람: Paolo Giannozzi  대신 users 

보낸 날짜: 2019년 3월 18일 월요일 오후 5:56
받는 사람: Quantum Espresso users Forum
제목: Re: [QE-users] Too many r-vectors error while running cp.x

On Mon, Mar 18, 2019 at 6:35 AM (대학원생) 한대호 (화학과) 
mailto:dh...@unist.ac.kr>> wrote:

  celldm(1) = 1.89

the algorithm that estimates the number of neighbors for DFT-D implicitly 
assumes that the lattice constant is the lattice constant, not a bogus number 
like the above one. Try first of all to set a proper value for "celldm".

Paolo


--
Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche,
Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
Phone +39-0432-558216, fax +39-0432-558222

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[QE-users] Too many r-vectors error while running cp.x

2019-03-17 Thread 대학원생
Hello,

I'm trying to run the Car-Parrinello dynamics on a pentacene-fullerene system.
When I run the electronic minimization with cp.x, it shows the error, "too many 
r-vectors." This error is always reproducible when I use the van der Waals 
correction, 'dft-d'. I guess that the electronic minimization without the vdw 
correction is probably reliable because the ions are fixed, but eventually I 
need to run the molecular dynamics with the option. (I found out that the same 
error also occurs in the md option.) So, how can I solve this problem?

Any help is greatly appreciated.

Thank you.

Daeho Han

Here's the input file:

  calculation = 'cp',
  restart_mode = 'from_scratch'
  pseudo_dir = '/home/dhhan/program/qe-6.3/pseudo/',
  outdir = './',
  prefix = 'x',
  tprnfor = .true.
  disk_io = 'low',
  ndw = 50
  nstep = 10
  dt = 2.5
  iprint=1
  isave = 100
  etot_conv_thr = 1.d-9
  ekin_conv_thr = 1.d-4
/


  ibrav = 0,
  celldm(1) = 1.89 ,
  nat = 96,
  ntyp = 2,
  nspin = 1,
  nbnd = 200,
  ecutwfc = 50,
  tot_charge = 0.0,
  nr1b = 10,
  nr2b = 10,
  nr3b = 10,
  vdw_corr = 'dft-d'
/


  electron_dynamics = 'sd'
  emass = 400.d0
/

$IONS
  ion_dynamics = 'none'
/
$CELL
  cell_dynamics = 'none'
  press = 0.0d0
/

ATOMIC_SPECIES
 C  12.01  c_pbe_v1.2.uspp.F.UPF
 H  1.008  h_pbe_v1.4.uspp.F.UPF

CELL_PARAMETERS {alat}
30.0000.0000.000
 0.000   30.0000.000
 0.0000.000   30.000

ATOMIC_POSITIONS {alat}
C-3.620019680  -1.596664767  -2.981088793
C-5.049446573  -1.551957644  -2.955719388
H-5.550242110  -1.531945305  -1.981688934
C-5.773877596  -1.521724485  -4.118155337
C-5.113314586  -1.543823352  -5.386022394
C-3.746249846  -1.598321275  -5.458279948
H-3.235876507  -1.613352411  -6.427434150
C-2.947413637  -1.623340762  -4.272153533
C 0.711467886  -1.297048188  -0.731337101
C-0.681004135  -1.450567531  -0.684622495
H-1.188646096  -1.415069620   0.286226517
C-1.448496595  -1.570983559  -1.850510970
C-0.773974552  -1.606764345  -3.143573693
C 0.624803034  -1.523543426  -3.185386085
H 1.130607036  -1.539147286  -4.157616134
C 1.386147130  -1.333864744  -2.023964228
H 5.501737273   0.131789158   2.326306574
C 4.932192343  -0.130321082   1.429616510
C 3.599383930  -0.431413616   1.525858698
H 3.088198215  -0.413607385   2.494648776
C 2.834738057  -0.763753469   0.363647824
C 3.506845025  -0.788914066  -0.927490969
C 4.901012359  -0.474472537  -0.977381056
H 5.401262401  -0.489054724  -1.951679285
C 5.591546399  -0.150689817   0.161194947
H 6.655448371   0.097458132   0.105475937
C 2.775571895  -1.092116620  -2.072233651
C 1.471725180  -1.035054217   0.428251941
C-2.859620257  -1.589702670  -1.816319912
C-1.556829295  -1.648461975  -4.317425599
H-6.866387935  -1.476959384  -4.082946616
H-5.710282815  -1.514110422  -6.302383669
H-3.365609741  -1.562799799  -0.844115136
H-1.051325976  -1.666342639  -5.290100609
H 3.281517719  -1.106238988  -3.044716269
H 0.963211455  -1.006611265   1.399081785
C-0.513273424   6.385540559   0.645143886
C-1.684255282   5.529884159   0.642596711
C-1.232546111   4.151635345   0.640753255
C 0.217273101   4.154931930   0.642235014
C 0.662171269   5.535796350   0.644345310
C 1.791785119   5.907237005  -0.089593407
C 2.519160733   4.911448331  -0.853855057
C 2.090321693   3.580903795  -0.856042131
C 0.917587645   3.195443892  -0.094499559
C 0.195304399   2.196897077  -0.858740117
C-1.201784605   2.193288767  -0.860281083
C-1.927907483   3.189338378  -0.097079156
C-3.102118197   3.569516795  -0.859113865
C-3.537469491   4.897345340  -0.856060062
C-2.815325479   5.896019655  -0.091384560
C-2.819230145   7.131371389  -0.851267102
C-3.544097170   6.896056651  -2.085379579
C-3.988198258   5.515340327  -2.087857262
C-3.986382454   4.781958166  -3.277291825
C-3.536275201   3.403038206  -3.280301332
C-3.101477979   2.807540389  -2.093038977
C-1.927775755   1.956038993  -2.093737695
C-1.228673483   1.734470822  -3.282392101
C 0.221199780   1.740407794  -3.280758005
C 0.920410155   1.966792484  -2.093041655
C 2.091247837   2.820536599  -2.091463512
C 2.524135295   3.417735819  -3.279291856
C 2.968491525   4.798694298  -3.276987984
C 2.966345651   5.532053762  -2.086567670
C 2.514296188   6.910346651  -2.084569182
C 2.081635913   7.507035534  -3.272766097
C 2.084051019   6.746476570  -4.508346479
C 2.519065478   5.417523089  -4.510238633
C 1.795668169   4.418189088  -5.274193365
C 1.798791742   3.182704328  -4.513220249
C 0.668797905   2.358585627  -4.513405104
C-0.505696107   2.738310163  -5.275979917
C-1.678466595   2.352184004  -4.514278903
C-2.811525902   3.170728513  -4.514359178
C-2.813492548   4.406743522  -5.273955466
C