[Pw_forum] internal FFTW vs FFTW3

2012-06-28 Thread Roozbeh Sanaei
I Could Compile QE with Gfortran (Last version) but many examples were failing 
by Seg. Err.

When I used internal FFTW instead of FFTW3 (justby replacing? _FFTW3 with _FFTW 
in make.sys) problem has now solved. It seems that there are kind of 
incompatablities between FFTW3 with QE or I dont know the exact reason.

Regards,
ROOZBEH SANAEI



[Pw_forum] ANY Promising Compiler and OS for running QE 5.0 TESTS and Examples?

2012-06-26 Thread Roozbeh Sanaei
Hi Everybody,
So far, I have tried many compilers and configurations , QE were Compiled 
successfully each time, but after compilation, many examples and both? tests in 
PW and CPV directories failed.

Could you please provide me ANY promising Configuration 
(Compiler,Prerequisites, OS) which is known already to work well? with QE 5.0. 
and provided examples and? tests and examples can run without segmentation 
fault.


Regards,
Roozbeh Sanaei,
National University of Singapore


[Pw_forum] QE 5.0 compiled with Gfortran and iFort fails the check-cp.x.j and check-pw.x.j.

2012-06-25 Thread Roozbeh Sanaei
Both GFortran and iFort Compile QE well without problem. BUT QE compiled with 
any of them, fails in Examples and Tests of the CPV and PW directories.

I have attached the report below:




RESULTS:


ERRORS:


GFORTRAN:
sudo apt-get install build-essential fftw3-dev gfortran

CPV directory:? 
autopilot_example
running CP? calculation with AUTOPILOT option...Segmentation fault (core dumped)
restart_Example
Starting the cp.x calculation (with fixed ions)...Segmentation fault (core 
dumped)

check-cp.x.j 
Checking o2-us-para-pbe1..2..3..4.Segmentation fault (core dumped)
FAILED with error condition!



PW directory: 
Example01
running the scf calculation for Al...Segmentation fault (core dumped)

Example03
?running the MD calculation for Si in a 8 atom cell. G-point...Segmentation 
fault (core dumped)

Example06
?running the scf calculation for Ni...Segmentation fault (core dumped)

Exx_Example
?running the scf calculation for Si with nq = 1 ...Segmentation fault (core 
dumped)

ESM_Example
running the scf calculation for Al(111) with ESM bc2 (metal-slab-metal)
? (no applied field)...Segmentation fault (core dumped)

check-pw.x.j
Checking atom-lsda...Segmentation fault (core dumped)



IFORT:
I installed ifort (Intel? Fortran Composer XE 2011 for Linux) available at 
http://software.intel.com/en-us/articles/intel-compilers/
Then I set the pathes:
source /opt/intel/composer_xe_2011_sp1.10.319/bin/ia32/idbvars.sh
source /opt/intel/composer_xe_2011_sp1.10.319/pkg_bin/ifortvars.sh ia32

ERRORS:

CPV directory:??

Example01
running the calculation with fixed ions, restart...forrtl: severe (174): 
SIGSEGV, segmentation fault occurred

Example05
?? running the calculation with electric field...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred

check-pw.x.j
Checking o2-us-para-pbe1.forrtl: severe (174): SIGSEGV, segmentation fault 
occurred




PW directory:? 

Example01running the scf calculation for Al...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred

Example03
?running the MD calculation for Si in a 2 atom cell. G-point...forrtl: severe 
(174): SIGSEGV, segmentation fault occurred

Example06
? running the scf calculation for Cu...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred

EXX_Example 
running the scf calculation for Si with nq = 2 ...forrtl: severe (174): 
SIGSEGV, segmentation fault occurred

check-pw.x.j
Checking berry...forrtl: severe (174): SIGSEGV, segmentation fault occurred??? 
??? 


[Pw_forum] QE 5.0 compiled with Gfortran and iFort fails the check-cp.x.j and check-pw.x.j.

2012-06-25 Thread Roozbeh Sanaei
Hi,
I have tried QE 5.0 CP and PW examples with GFortran and IFort compilers but 
both check-cp.x.j  and check-pw.x.j fialed for both of compilers.? examples 
some succeed and some failed in both conditions.? 


Which compiler and OS major developers use themselves? Can anybody suggest me a 
free compiler or even a verison of linux, together with Configuration 
Parameters which works? "best"? or "acceptable" with QE, (i.e. checks and 
examples can run without problem).


With Regards,
Roozbeh Sanaei

---
Full Report: (Ubuntu 12.04- OPTIPLEX 755)

Steps I have taken to Install Quantum Espresso:

0.? Installed fresh version of Ubuntu 12.04 on my system (OPTIPLEX 755)

1. I installed build-essential, gfortran and fftw3-dev by
?sudo apt-get install build-essential fftw3-dev gfortran

2. I got updates 
sudo apt-get update

3.? I entered Ubuntu as root,? Espresso folder copied into an accessible 
location (Home) and? software directory? made executable and?these permissions 
applied to enclosed files. otherwise I was receiving "permission denied".

5.In the main directory of Quantum espresso and? the configure I executed the 
bash file??./Configure then I entered command? make all.

7. After installation? I faced some errors in Running examples and tests. 




RESULTS:

GFORTRAN:

CPV directory:? 
autopilot_example
running CP? calculation with AUTOPILOT option...Segmentation fault (core dumped)
restart_Example
Starting the cp.x calculation (with fixed ions)...Segmentation fault (core 
dumped)

check-cp.x.j 
Checking o2-us-para-pbe1..2..3..4.Segmentation fault (core dumped)
FAILED with error condition!



PW directory: 
Example01
running the scf calculation for Al...Segmentation fault (core dumped)

Example03
?running the MD calculation for Si in a 8 atom cell. G-point...Segmentation 
fault (core dumped)

Example06
?running the scf calculation for Ni...Segmentation fault (core dumped)

Exx_Example
?running the scf calculation for Si with nq = 1 ...Segmentation fault (core 
dumped)

ESM_Example
running the scf calculation for Al(111) with ESM bc2 (metal-slab-metal)
? (no applied field)...Segmentation fault (core dumped)

check-pw.x.j
Checking atom-lsda...Segmentation fault (core dumped)



IFORT:
I installed ifort (Intel? Fortran Composer XE 2011 for Linux) available at 
http://software.intel.com/en-us/articles/intel-compilers/
and executed these commands to determine the PATH
source /opt/intel/composer_xe_2011_sp1.10.319/bin/ia32/idbvars.sh
source /opt/intel/composer_xe_2011_sp1.10.319/pkg_bin/ifortvars.sh ia32

Then I configured? and Compiled it again and Then I got other problems


CPV directory:??

Example01
running the calculation with fixed ions, restart...forrtl: severe (174): 
SIGSEGV, segmentation fault occurred

Example05
?? running the calculation with electric field...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred

check-pw.x.j
Checking o2-us-para-pbe1.forrtl: severe (174): SIGSEGV, segmentation fault 
occurred




PW directory:? 

Example01running the scf calculation for Al...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred


Example03
?running the MD calculation for Si in a 2 atom cell. G-point...forrtl: severe 
(174): SIGSEGV, segmentation fault occurred

Example06
? running the scf calculation for Cu...forrtl: severe (174): SIGSEGV, 
segmentation fault occurred

EXX_Example 

running the scf calculation for Si with nq = 2 ...forrtl: severe (174): 
SIGSEGV, segmentation fault occurred

check-pw.x.j
Checking berry...forrtl: severe (174): SIGSEGV, segmentation fault occurred??? 
??? 



When I installed all updated on the linux, Example01, Example05 
CPV directory were run OK. but other problems still there!!! And both checks 
failed.? ??