[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread shamik chakrabarti
Dear wien2k users,

   Any response of my previous mail will be very
helpful for us. Eagerly waiting for your comments.

with regards,

-- Forwarded message --
From: shamik chakrabarti shamik...@gmail.com
Date: Sun, Dec 11, 2011 at 5:42 PM
Subject: not getting convergence with MBJ potential
To: A Mailing list for WIEN2k users wien at zeus.theochem.tuwien.ac.at


Dear wien2k users,

   I am trying to simulate electronic structure of a
charge transfer insulator. Our system consists of a unit cell having 56
atoms and we are using 14 k-points. As GGA+U method was failed to reproduce
the proper band gap (in fact much less than the experimentally obtained
one) we have opted for MBJ potential. *Initially the mixing parameter was
set to 0.2 and we got Ghost band error after few iterations. Hence we
reduce the mixing parameter to 0.15.* Until now still it has shown no error
except some extra message in case.dayfile. I am giving those messages
below. So far e.c.  c.c were achieved up to 2.239...  5.4599 respectively
and already 36 iterations are over. My questions are:

(1) Is it ok to set up a mixing parameter of 0.15 that is with it, is it
possible to reach convergence?

(2) As plain GGA takes around 80 iterations to converge, is it that MBJ
potential will take much higher than that as we know it is always hard to
get convergence with this method?

(3) what are the meanings of the given messages below:

  lapw2 -c -up   -vresp (17:12:13)lapw1  -c -dn (16:19:33)
10848.369u 98.026s 52:39.78 346.4% 0+0k 0+1099920io 0pf+0w
   lapw1  -c -up (15:26:49) 10864.462u 99.082s 52:44.39 346.4% 0+0k
0+1100232io 0pf+0w
460.324u 151.313s 6:52.62 148.2% 0+0k 0+732368io 0pf+0w
 -5.956509016536202E-002
  3.325214690385789E-002 -9.166205529297161E-002 tauwrong=
 int:rho,tauw,grho,g2rho  2.146196813781874E-002  1.287982148952303E-002
 -4.564940741427861E-002
  3.061850458947012E-002 -5.357427363703868E-002 tauwrong=
 int:rho,tauw,grho,g2rho  1.778719641126464E-002  1.317651193616000E-002
 *what is tauwrong?*
 -4.561631481999567E-002
  3.051935798833875E-002 -5.372842413400847E-002 tauwrong=
 int:rho,tauw,grho,g2rho  1.783702549056333E-002  1.305474408433668E-002
 -2.872847342414767E-002
  2.625149916992486E-002 -2.271097056901070E-002 tauwrong=
 int:rho,tauw,grho,g2rho  1.456340274765583E-002  1.183001700580401E-002
 -2.843529510619935E-002
  2.60760246414E-002 -2.279192386903682E-002 tauwrong=
 int:rho,tauw,grho,g2rho  1.462794826548238E-002  1.162089194449066E-002
 -1.211083415464120E-002
..
..
   lapw0 (15:19:56)  sphere:rho,tauw,grho,g2rho   7.4687572237
 180.956718336004
   lapw0 -grr (15:15:10) 315.375u 93.253s 4:45.73 143.0% 0+0k
0+


Any response in this regard will be very helpful for us. Thanks in advance.

with regards,
-- 
Shamik Chakrabarti
Senior Research Fellow
Dept. of Physics  Meteorology
Material Processing  Solid State Ionics Lab
IIT Kharagpur
Kharagpur 721302
INDIA



-- 
Shamik Chakrabarti
Senior Research Fellow
Dept. of Physics  Meteorology
Material Processing  Solid State Ionics Lab
IIT Kharagpur
Kharagpur 721302
INDIA
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[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread pascal boulet
Hello,

It is strange that you have such a bad convergence on the energy and the
charge after that many cycles.
My feeling is that something is wrong in the input.

Have a look at the user manual. From page 205 on, there is an
explanation of the meaning of ghost bands. You have to experiment on
your chemical system to get rid of them.

Pascal


On 12/12/2011 05:21, shamik chakrabarti wrote:
 Dear wien2k users,

Any response of my previous mail will be very
 helpful for us. Eagerly waiting for your comments.

 with regards,

 -- Forwarded message --
 From: *shamik chakrabarti* shamikphy at gmail.com
 mailto:shamikphy at gmail.com
 Date: Sun, Dec 11, 2011 at 5:42 PM
 Subject: not getting convergence with MBJ potential
 To: A Mailing list for WIEN2k users wien at zeus.theochem.tuwien.ac.at
 mailto:wien at zeus.theochem.tuwien.ac.at


 Dear wien2k users,

I am trying to simulate electronic structure of
 a charge transfer insulator. Our system consists of a unit cell having
 56 atoms and we are using 14 k-points. As GGA+U method was failed to
 reproduce the proper band gap (in fact much less than the
 experimentally obtained one) we have opted for MBJ potential.
 *Initially the mixing parameter was set to 0.2 and we got Ghost band
 error after few iterations. Hence we reduce the mixing parameter to
 0.15.* Until now still it has shown no error except some extra message
 in case.dayfile. I am giving those messages below. So far e.c.  c.c
 were achieved up to 2.239...  5.4599 respectively and already 36
 iterations are over. My questions are:

 (1) Is it ok to set up a mixing parameter of 0.15 that is with it, is
 it possible to reach convergence?

 (2) As plain GGA takes around 80 iterations to converge, is it that
 MBJ potential will take much higher than that as we know it is always
 hard to get convergence with this method?

 (3) what are the meanings of the given messages below:

   lapw2 -c -up   -vresp (17:12:13)lapw1  -c -dn(16:19:33)
 10848.369u 98.026s 52:39.78 346.4%0+0k 0+1099920io 0pf+0w
lapw1  -c -up(15:26:49) 10864.462u 99.082s 52:44.39 346.4%0+0k
 0+1100232io 0pf+0w
 460.324u 151.313s 6:52.62 148.2%0+0k 0+732368io 0pf+0w
  -5.956509016536202E-002
   3.325214690385789E-002 -9.166205529297161E-002 tauwrong=
  int:rho,tauw,grho,g2rho  2.146196813781874E-002  1.287982148952303E-002
  -4.564940741427861E-002
   3.061850458947012E-002 -5.357427363703868E-002 tauwrong=
  int:rho,tauw,grho,g2rho  1.778719641126464E-002
  1.317651193616000E-002*what is tauwrong?*
  -4.561631481999567E-002
   3.051935798833875E-002 -5.372842413400847E-002 tauwrong=
  int:rho,tauw,grho,g2rho  1.783702549056333E-002  1.305474408433668E-002
  -2.872847342414767E-002
   2.625149916992486E-002 -2.271097056901070E-002 tauwrong=
  int:rho,tauw,grho,g2rho  1.456340274765583E-002  1.183001700580401E-002
  -2.843529510619935E-002
   2.60760246414E-002 -2.279192386903682E-002 tauwrong=
  int:rho,tauw,grho,g2rho  1.462794826548238E-002  1.162089194449066E-002
  -1.211083415464120E-002
 ..
 ..
lapw0 (15:19:56)  sphere:rho,tauw,grho,g2rho   7.4687572237  
  180.956718336004 
lapw0 -grr (15:15:10) 315.375u 93.253s 4:45.73 143.0%0+0k
 0+

  
 Any response in this regard will be very helpful for us. Thanks in
 advance.

 with regards,
 -- 
 Shamik Chakrabarti
 Senior Research Fellow
 Dept. of Physics  Meteorology
 Material Processing  Solid State Ionics Lab
 IIT Kharagpur
 Kharagpur 721302
 INDIA



 -- 
 Shamik Chakrabarti
 Senior Research Fellow
 Dept. of Physics  Meteorology
 Material Processing  Solid State Ionics Lab
 IIT Kharagpur
 Kharagpur 721302
 INDIA


 ___
 Wien mailing list
 Wien at zeus.theochem.tuwien.ac.at
 http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien

-- 
Dr. pascal Boulet, computational chemist
University of Aix-Marseille I 
Laboratoire Chimie Provence, UMR 6264
Group of Theoretical Chemistry
Avenue Normandie-Niemen
13397 Marseille Cedex 20
France
**
Tel. (+33) (0)413.55.18.10
Fax. (+33) (0)413.55.18.50
**
http://www.lc-provence.fr
https://sites.google.com/a/univ-provence.fr/pb-comput-chem
%%

* Fran?ais - d?tect?
* Anglais
* Fran?ais

* Anglais
* Fran?ais

javascript:void(0);


[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread Peter Blaha
When you need 80 iterations with GGA, it is rather clear that also mBJ will 
take a long time
(usually a bit longer ).

Anyway: Have you checked the forces (total, not partial !!) in the GGA 
calculation. Small forces
will tell you that your structure is probably ok, large forces (gt. 10-20) 
means that the structure is
NOT ok.

The TAUWRONG messages indicate, that the kinetic energy density is not 
accurate (we check some
known constrains like positive tau, comparison with tau-weiz?cker,, and 
limit wrong values.
Something like this may happen at the beginning of mBJ, but usually indicate 
that the calculations are
not well converged (RKmax, GMAX ?) or the vresp file and the clmsum file do not 
match properly.

PRATT with 0.15 at the beginning should be fine. Usually, after 10-20 
iterations one should see
grep :DIS case.scf   starting to decrease slightly but steadily. At this 
stage one can usually
switch to MSR1 to accelerate convergence.

BUT: If this is a transition metal compound and the gap is expected between 
partially occupied d-bands,
but LDA+U does not give a gap, then I also expect that something is wrong with 
the (magnetic ??) structure ...
E.g.: a ferromagnetic solution will stay magnetic, while a PROPER AFM structure 
may give an insulator.

Am 12.12.2011 08:45, schrieb shamik chakrabarti:
 Dear Dr. Pascal,

  As we were getting Ghost band error due to large charge 
 fluctuation during initial cycle *we have reduced the mixing parameter from 
 0.2 to 0.15  hence thereafter
 we have not received ghost band error yet.*

 As long as variation of RMT is concerned the variation is only from 1.7 to 
 2.01 in the structure.

 So far there is no energy equivalence between a local orbital and overall 
 energy parameter which can induce ghost band error.

 Also we have achieved convergence of -0.34 with plain GGA and only with 
 MBJ potential we are getting the convergence problem and again plain GGA and 
 also GGA+U have not given
 the proper electronic structure.

 As far as the structure is concerned we are very much sure about its 
 structural parameters as they are giving the same XRD as experiment when the 
 positional coordinates and
 lattice parameters of the 56 atom cell were put into a software powdcell.

 looking forwards to your comments.

 with regards,
 On Mon, Dec 12, 2011 at 12:26 PM, pascal boulet pascal.boulet at 
 univ-provence.fr mailto:pascal.boulet at univ-provence.fr wrote:

 Hello,

 It is strange that you have such a bad convergence on the energy and the
 charge after that many cycles.
 My feeling is that something is wrong in the input.

 Have a look at the user manual. From page 205 on, there is an
 explanation of the meaning of ghost bands. You have to experiment on
 your chemical system to get rid of them.

 Pascal


 On 12/12/2011 05:21, shamik chakrabarti wrote:
   Dear wien2k users,
  
  Any response of my previous mail will be very
   helpful for us. Eagerly waiting for your comments.
  
   with regards,
  
   -- Forwarded message --
   From: *shamik chakrabarti* shamikphy at gmail.com mailto:shamikphy 
 at gmail.com
   mailto:shamikphy at gmail.com mailto:shamikphy at gmail.com
   Date: Sun, Dec 11, 2011 at 5:42 PM
   Subject: not getting convergence with MBJ potential
   To: A Mailing list for WIEN2k users wien at 
 zeus.theochem.tuwien.ac.at mailto:wien at zeus.theochem.tuwien.ac.at
   mailto:wien at zeus.theochem.tuwien.ac.at mailto:wien at 
 zeus.theochem.tuwien.ac.at
  
  
   Dear wien2k users,
  
  I am trying to simulate electronic structure of
   a charge transfer insulator. Our system consists of a unit cell having
   56 atoms and we are using 14 k-points. As GGA+U method was failed to
   reproduce the proper band gap (in fact much less than the
   experimentally obtained one) we have opted for MBJ potential.
   *Initially the mixing parameter was set to 0.2 and we got Ghost band
   error after few iterations. Hence we reduce the mixing parameter to
   0.15.* Until now still it has shown no error except some extra message
   in case.dayfile. I am giving those messages below. So far e.c.  c.c
   were achieved up to 2.239...  5.4599 respectively and already 36
   iterations are over. My questions are:
  
   (1) Is it ok to set up a mixing parameter of 0.15 that is with it, is
   it possible to reach convergence?
  
   (2) As plain GGA takes around 80 iterations to converge, is it that
   MBJ potential will take much higher than that as we know it is always
   hard to get convergence with this method?
  
   (3) what are the meanings of the given messages below:
  
 lapw2 -c -up   -vresp (17:12:13)lapw1  -c -dn(16:19:33)
   10848.369u 98.026s 52:39.78 

[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread pascal boulet

Dear Dr. Chakrabarti,

All right. So, another idea: could it be that you restarted your m-BJ
calculation using the converged GGA or GGA+U density? I ran into these
kinds of troubles several times. I found it preferable to start from
scratch...

Hope this help,
Pascal

On 12/12/2011 08:45, shamik chakrabarti wrote:
 Dear Dr. Pascal,  

 As we were getting Ghost band error due to large
 charge fluctuation during initial cycle *we have reduced the mixing
 parameter from 0.2 to 0.15  hence thereafter we have not received
 ghost band error yet.*

 As long as variation of RMT is concerned the variation is only from
 1.7 to 2.01 in the structure.

 So far there is no energy equivalence between a local orbital and
 overall energy parameter which can induce ghost band error.

 Also we have achieved convergence of -0.34 with plain GGA and only
 with MBJ potential we are getting the convergence problem and again
 plain GGA and also GGA+U have not given the proper electronic structure.

 As far as the structure is concerned we are very much sure about its
 structural parameters as they are giving the same XRD as experiment
 when the positional coordinates and lattice parameters of the 56 atom
 cell were put into a software powdcell.

 looking forwards to your comments.

 with regards,
 On Mon, Dec 12, 2011 at 12:26 PM, pascal boulet
 pascal.boulet at univ-provence.fr
 mailto:pascal.boulet at univ-provence.fr wrote:

 Hello,

 It is strange that you have such a bad convergence on the energy
 and the
 charge after that many cycles.
 My feeling is that something is wrong in the input.

 Have a look at the user manual. From page 205 on, there is an
 explanation of the meaning of ghost bands. You have to experiment on
 your chemical system to get rid of them.

 Pascal


 On 12/12/2011 05:21, shamik chakrabarti wrote:
  Dear wien2k users,
 
 Any response of my previous mail will be very
  helpful for us. Eagerly waiting for your comments.
 
  with regards,
 
  -- Forwarded message --
  From: *shamik chakrabarti* shamikphy at gmail.com
 mailto:shamikphy at gmail.com
  mailto:shamikphy at gmail.com mailto:shamikphy at gmail.com
  Date: Sun, Dec 11, 2011 at 5:42 PM
  Subject: not getting convergence with MBJ potential
  To: A Mailing list for WIEN2k users
 wien at zeus.theochem.tuwien.ac.at
 mailto:wien at zeus.theochem.tuwien.ac.at
  mailto:wien at zeus.theochem.tuwien.ac.at
 mailto:wien at zeus.theochem.tuwien.ac.at
 
 
  Dear wien2k users,
 
 I am trying to simulate electronic
 structure of
  a charge transfer insulator. Our system consists of a unit cell
 having
  56 atoms and we are using 14 k-points. As GGA+U method was failed to
  reproduce the proper band gap (in fact much less than the
  experimentally obtained one) we have opted for MBJ potential.
  *Initially the mixing parameter was set to 0.2 and we got Ghost band
  error after few iterations. Hence we reduce the mixing parameter to
  0.15.* Until now still it has shown no error except some extra
 message
  in case.dayfile. I am giving those messages below. So far e.c.  c.c
  were achieved up to 2.239...  5.4599 respectively and already 36
  iterations are over. My questions are:
 
  (1) Is it ok to set up a mixing parameter of 0.15 that is with
 it, is
  it possible to reach convergence?
 
  (2) As plain GGA takes around 80 iterations to converge, is it that
  MBJ potential will take much higher than that as we know it is
 always
  hard to get convergence with this method?
 
  (3) what are the meanings of the given messages below:
 
lapw2 -c -up   -vresp (17:12:13)lapw1  -c -dn(16:19:33)
  10848.369u 98.026s 52:39.78 346.4%0+0k 0+1099920io 0pf+0w
 lapw1  -c -up(15:26:49) 10864.462u 99.082s 52:44.39
 346.4%0+0k
  0+1100232io 0pf+0w
  460.324u 151.313s 6:52.62 148.2%0+0k 0+732368io 0pf+0w
   -5.956509016536202E-002
3.325214690385789E-002 -9.166205529297161E-002 tauwrong=
   int:rho,tauw,grho,g2rho  2.146196813781874E-002
  1.287982148952303E-002
   -4.564940741427861E-002
3.061850458947012E-002 -5.357427363703868E-002 tauwrong=
   int:rho,tauw,grho,g2rho  1.778719641126464E-002
   1.317651193616000E-002*what is tauwrong?*
   -4.561631481999567E-002
3.051935798833875E-002 -5.372842413400847E-002 tauwrong=
   int:rho,tauw,grho,g2rho  1.783702549056333E-002
  1.305474408433668E-002
   -2.872847342414767E-002
2.625149916992486E-002 -2.271097056901070E-002 tauwrong=
   int:rho,tauw,grho,g2rho  1.456340274765583E-002
  1.183001700580401E-002
   -2.843529510619935E-002
2.60760246414E-002 -2.279192386903682E-002 

[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread Laurence Marks
I wonder whether you really have the structure right.

a) When you say that you get the same structure, what R-factor? Powder
diffraction is not very sensitive to oxygen positions in the presence
of heavy metal atoms.

b) If GGA takes about 80 iterations I suspect that you have a metal.
If you do not have the correct number of oxygen versus metal atoms you
will get this, and no amount of U or mBJ will change this (in 99% of
cases). Check the bond-valence sums of your model, are the numbers
reasonable? This is a standard test in solid-state chemistry.

c) Do you have large forces (as Peter asked)? If you do this also
indicates that you have the structure wrong.

d) When you say that you were using a greed of 0.2 (please do not use
the term mixing factor, it is misleading) was this for Pratt or
MSR1? A change from 0.2 to 0.15 with MSR1 will not matter much.

2011/12/12 shamik chakrabarti shamikphy at gmail.com:
 Dear Dr Peter Blaha and Dr Pascal,

 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? The material is a ferrimagnetic transition
 metal compound and a charge transfer insulator and the gap is between d and
 O p states. Yes we have started MBJ potential calculation from the converged
 GGA charge density. So what we can do, we can start from the scratch with
 MBJ potential and after few iterations will get shifted to MSR1 mixing to
 improve the convergence. We hope that will help. Thank you for all your
 helps.

 with regards,


 On Mon, Dec 12, 2011 at 1:31 PM, pascal boulet
 pascal.boulet at univ-provence.fr wrote:


 Dear Dr. Chakrabarti,

 All right. So, another idea: could it be that you restarted your m-BJ
 calculation using the converged GGA or GGA+U density? I ran into these
 kinds of troubles several times. I found it preferable to start from
 scratch...

 Hope this help,
 Pascal

 On 12/12/2011 08:45, shamik chakrabarti wrote:
  Dear Dr. Pascal,
 
  ? ? ? ? ? ? ? ? As we were getting Ghost band error due to large
  charge fluctuation during initial cycle *we have reduced the mixing
  parameter from 0.2 to 0.15  hence thereafter we have not received
  ghost band error yet.*
 
  As long as variation of RMT is concerned the variation is only from
  1.7 to 2.01 in the structure.
 
  So far there is no energy equivalence between a local orbital and
  overall energy parameter which can induce ghost band error.
 
  Also we have achieved convergence of -0.34 with plain GGA and only
  with MBJ potential we are getting the convergence problem and again
  plain GGA and also GGA+U have not given the proper electronic structure.
 
  As far as the structure is concerned we are very much sure about its
  structural parameters as they are giving the same XRD as experiment
  when the positional coordinates and lattice parameters of the 56 atom
  cell were put into a software powdcell.
 
  looking forwards to your comments.
 
  with regards,
  On Mon, Dec 12, 2011 at 12:26 PM, pascal boulet
  pascal.boulet at univ-provence.fr
  mailto:pascal.boulet at univ-provence.fr wrote:
 
  ? ? Hello,
 
  ? ? It is strange that you have such a bad convergence on the energy
  ? ? and the
  ? ? charge after that many cycles.
  ? ? My feeling is that something is wrong in the input.
 
  ? ? Have a look at the user manual. From page 205 on, there is an
  ? ? explanation of the meaning of ghost bands. You have to experiment on
  ? ? your chemical system to get rid of them.
 
  ? ? Pascal
 
 
  ? ? On 12/12/2011 05:21, shamik chakrabarti wrote:
  ? ?  Dear wien2k users,
  ? ? 
  ? ?  ? ? ? ? ? ? ? ? ? ? ? ?Any response of my previous mail will be
  very
  ? ?  helpful for us. Eagerly waiting for your comments.
  ? ? 
  ? ?  with regards,
  ? ? 
  ? ?  -- Forwarded message --
  ? ?  From: *shamik chakrabarti* shamikphy at gmail.com
  ? ? mailto:shamikphy at gmail.com
  ? ?  mailto:shamikphy at gmail.com mailto:shamikphy at gmail.com
  ? ?  Date: Sun, Dec 11, 2011 at 5:42 PM
  ? ?  Subject: not getting convergence with MBJ potential
  ? ?  To: A Mailing list for WIEN2k users
  ? ? wien at zeus.theochem.tuwien.ac.at
  ? ? mailto:wien at zeus.theochem.tuwien.ac.at
  ? ?  mailto:wien at zeus.theochem.tuwien.ac.at
  ? ? mailto:wien at zeus.theochem.tuwien.ac.at
  ? ? 
  ? ? 
  ? ?  Dear wien2k users,
  ? ? 
  ? ?  ? ? ? ? ? ? ? ? ? ? ? ?I am trying to simulate electronic
  ? ? structure of
  ? ?  a charge transfer insulator. Our system consists of a unit cell
  ? ? having
  ? ?  56 atoms and we are using 14 k-points. As GGA+U method was failed
  to
  ? ?  reproduce the proper band gap (in fact much less than the
  ? ?  experimentally obtained one) we have opted for MBJ potential.
  ? ?  *Initially the mixing parameter was set to 0.2 and we got Ghost
  band
  ? ?  error after few iterations. Hence we reduce the mixing parameter
  to
  ? ?  0.15.* Until now still it has shown no error except some extra
  ? ? message
  ? ?  in case.dayfile. I am giving those messages below. So far e.c. 
  c.c
  ? ?  were achieved up to 2.239...  

[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread shamik chakrabarti
 at zeus.theochem.tuwien.ac.at
http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
  
   --
   Dr. pascal Boulet, computational chemist
   University of Aix-Marseille I
   Laboratoire Chimie Provence, UMR 6264
   Group of Theoretical Chemistry
   Avenue Normandie-Niemen
   13397 Marseille Cedex 20
   France
   **
   Tel. (+33) (0)413.55.18.10
   Fax. (+33) (0)413.55.18.50
   **
   http://www.lc-provence.fr
   https://sites.google.com/a/univ-provence.fr/pb-comput-chem
   %%
  
  * Fran?ais - d?tect?
  * Anglais
  * Fran?ais
  
  * Anglais
  * Fran?ais
  
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   http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
  
  
  
  
   --
   Shamik Chakrabarti
   Senior Research Fellow
   Dept. of Physics  Meteorology
   Material Processing  Solid State Ionics Lab
   IIT Kharagpur
   Kharagpur 721302
   INDIA
  
  
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  13397 Marseille Cedex 20
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  **
  Tel. (+33) (0)413.55.18.10
  Fax. (+33) (0)413.55.18.50
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  Shamik Chakrabarti
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  Dept. of Physics  Meteorology
  Material Processing  Solid State Ionics Lab
  IIT Kharagpur
  Kharagpur 721302
  INDIA
 
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 Professor Laurence Marks
 Department of Materials Science and Engineering
 Northwestern University
 www.numis.northwestern.edu 1-847-491-3996
 Research is to see what everybody else has seen, and to think what
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-- 
Shamik Chakrabarti
Senior Research Fellow
Dept. of Physics  Meteorology
Material Processing  Solid State Ionics Lab
IIT Kharagpur
Kharagpur 721302
INDIA
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[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread Laurence Marks
If your structure is a metal in GGA in 99% of cases it will be a metal
in GGA+U and mBJ. And, it is wrong. Just because others reported the
structure does not mean that it is right! There are many cases where
someone reported a structure, others followed their lead and only
later someone pointed out that it was wrong.

Look at your GGA (or GGA+U) result, the overall DOS which is in
case.output2up/dn (or do a standard DOS calculation). If the positions
are close to correct you should see a gap between the different bands.
If you have electrons at E_F at the bottom of a band (metal d) your
structure is reduced; you will need some metal vacancies. If there are
holes at the top of the oxygen band your structure is oxidized -- you
will need some oxygen vacancies. Note that vacancies can be ordered or
disordered (partial occupancies) and simulating these is not easy.

Check the bond-valence sums, they are probably given by the powder
diffraction fitting program or there are many codes to do this. You
can even do a grep -e bond case.outputnn to get a decent number. All
the O's should be close to 2 (perhaps in the range 1.8-2.2) and all
the metals should be in reasonable states. For instance a value of 3.5
for Ti means that it is reduced, and a value of 4.5 means that
something is badly wrong. As a shameless plug look at Surface Science
doi:10.1016/j.susc.2011.10.018 and references therein, or for instance
I.D. Brown, Chem. Rev. 109 (2009). In my opinion BVS is a simple and
very quick way to do a sanity check and can save you from weeks of not
useful DFT calculations.

2011/12/12 shamik chakrabarti shamikphy at gmail.com:
 Dear Dr. Laurence Marks Sir,

 I am giving the answers all of your queries below,

 a) If R-factor means reliability factor then we have achieved a parameter
 called goodness of fit whose value was 1.0038. But this material was
 prepared previously by researchers and they have also got the same
 structure. Although the structure is based only on the Rietveld fitting of
 experimental XRD pattern. There was no rigorous TEM analysis on this
 structure so far.

 b) We have done UV-visible band gap measurement on this material and it is
 3.26 eV. But as you have said properly it is indeed coming as metal after
 getting converged in 80 iterations. But we have noticed that there are
 presence of O p orbital between upper and lower Hubbard band of transition
 metal atom and hence GGA+U will not improve the situation.

 c) At the moment we are a bit handicapped for doing Geometrical (both
 lattice parameter and atomic coordinates) optimization of 56 atoms unit cell
 structure as we do not have the facility of cluster. Hence as a first
 approximation we are first trying to reach as near as possible to the
 accurate electronic structure. We are soon going to get the facility and
 then we can use geometrical optimization.
 And hence we really do have large forces on the structure.

 d) We have used a greed of 0.2 and 0.15 both for PRATT mixing and we have
 not used MSR1 mixing for mbj potential yet.

 Sir, as far as the above discussion is concerned we might have our structure
 wrong (need more accurate TEM analysis!) or Geometrical optimization may
 solve the problem. But as we are now trying to experiment with test run we
 and as it seems GGA+U can not solve the problem we have opted for mbj
 potential.

 But as you have said if the structure is wrong (we are not yet confirmed
 though) we may never reach the convergence or desired electronic structure!

 Thank you very much for your help Sir.

 On Mon, Dec 12, 2011 at 6:52 PM, Laurence Marks L-marks at northwestern.edu
 wrote:

 I wonder whether you really have the structure right.

 a) When you say that you get the same structure, what R-factor? Powder
 diffraction is not very sensitive to oxygen positions in the presence
 of heavy metal atoms.

 b) If GGA takes about 80 iterations I suspect that you have a metal.
 If you do not have the correct number of oxygen versus metal atoms you
 will get this, and no amount of U or mBJ will change this (in 99% of
 cases). Check the bond-valence sums of your model, are the numbers
 reasonable? This is a standard test in solid-state chemistry.

 c) Do you have large forces (as Peter asked)? If you do this also
 indicates that you have the structure wrong.

 d) When you say that you were using a greed of 0.2 (please do not use
 the term mixing factor, it is misleading) was this for Pratt or
 MSR1? A change from 0.2 to 0.15 with MSR1 will not matter much.

 2011/12/12 shamik chakrabarti shamikphy at gmail.com:
  Dear Dr Peter Blaha and Dr Pascal,
 
  ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? The material is a ferrimagnetic transition
  metal compound and a charge transfer insulator and the gap is between d
  and
  O p states. Yes we have started MBJ potential calculation from the
  converged
  GGA charge density. So what we can do, we can start from the scratch
  with
  MBJ potential and after few iterations will get shifted to 

[Wien] Fwd: not getting convergence with MBJ potential

2011-12-12 Thread Peter Blaha
If your geometry is not correct, you cannot expect that the bandgaps are 
correct or
even metal/insulator state comes out correctly.

The experimental lattice parameters are usually ok, even in the simplest 
experiments, but the positions of
light elements (oxygen) vs. heavier ones are NOT. Thus I would take the exp. 
lattice parameters, but when
forces are big (10-20 mRy/bohr), you need to run a couple of min steps.

In all charge-transfer insulators you have the gap between O-2p and TM-d states 
and you CAN influence the
gap by LDA+U. Larger U simply shifts the upper Hubbard band up and makes a 
larger gap to O-2p. (PS: I'm
not arguing that LDA+U necessarily describes the physics correctly, but usually 
it does what one tells it).

PPS: Have you done optics ? Eventually matrix elements may influence the 
absorption and you cannot just look into the DOS.

 b) We have done UV-visible band gap measurement on this material and it is 
 3.26 eV. But as you have said properly it is indeed coming as metal after 
 getting converged in 80
 iterations. But we have noticed that there are presence of O p orbital 
 between upper and lower Hubbard band of transition metal atom and hence GGA+U 
 will not improve the situation.

 c) At the moment we are a bit handicapped for doing Geometrical (both lattice 
 parameter and atomic coordinates) optimization of 56 atoms unit cell 
 structure as we do not have the
 facility of cluster. Hence as a first approximation we are first trying to 
 reach as near as possible to the accurate electronic structure. We are soon 
 going to get the facility
 and then we can use geometrical optimization.
 And hence we really do have large forces on the structure.

 d) We have used a greed of 0.2 and 0.15 both for PRATT mixing and we have not 
 used MSR1 mixing for mbj potential yet.

 Sir, as far as the above discussion is concerned we might have our structure 
 wrong (need more accurate TEM analysis!) or Geometrical optimization may 
 solve the problem. But as we
 are now trying to experiment with test run we and as it seems GGA+U can not 
 solve the problem we have opted for mbj potential.

 But as you have said if the structure is wrong (we are not yet confirmed 
 though) we may never reach the convergence or desired electronic structure!

 Thank you very much for your help Sir.

 On Mon, Dec 12, 2011 at 6:52 PM, Laurence Marks L-marks at northwestern.edu 
 mailto:L-marks at northwestern.edu wrote:

 I wonder whether you really have the structure right.

 a) When you say that you get the same structure, what R-factor? Powder
 diffraction is not very sensitive to oxygen positions in the presence
 of heavy metal atoms.

 b) If GGA takes about 80 iterations I suspect that you have a metal.
 If you do not have the correct number of oxygen versus metal atoms you
 will get this, and no amount of U or mBJ will change this (in 99% of
 cases). Check the bond-valence sums of your model, are the numbers
 reasonable? This is a standard test in solid-state chemistry.

 c) Do you have large forces (as Peter asked)? If you do this also
 indicates that you have the structure wrong.

 d) When you say that you were using a greed of 0.2 (please do not use
 the term mixing factor, it is misleading) was this for Pratt or
 MSR1? A change from 0.2 to 0.15 with MSR1 will not matter much.

 2011/12/12 shamik chakrabarti shamikphy at gmail.com mailto:shamikphy 
 at gmail.com:
   Dear Dr Peter Blaha and Dr Pascal,
  
 The material is a ferrimagnetic 
 transition
   metal compound and a charge transfer insulator and the gap is between 
 d and
   O p states. Yes we have started MBJ potential calculation from the 
 converged
   GGA charge density. So what we can do, we can start from the scratch 
 with
   MBJ potential and after few iterations will get shifted to MSR1 mixing 
 to
   improve the convergence. We hope that will help. Thank you for all your
   helps.
  
   with regards,
  
  
   On Mon, Dec 12, 2011 at 1:31 PM, pascal boulet
   pascal.boulet at univ-provence.fr mailto:pascal.boulet at 
 univ-provence.fr wrote:
  
  
   Dear Dr. Chakrabarti,
  
   All right. So, another idea: could it be that you restarted your m-BJ
   calculation using the converged GGA or GGA+U density? I ran into these
   kinds of troubles several times. I found it preferable to start from
   scratch...
  
   Hope this help,
   Pascal
  
   On 12/12/2011 08:45, shamik chakrabarti wrote:
Dear Dr. Pascal,
   
As we were getting Ghost band error due to large
charge fluctuation during initial cycle *we have reduced the mixing
parameter from 0.2 to 0.15  hence thereafter we have not received
ghost band error yet.*
   
As long as variation of RMT is concerned the 

[Wien] w2web: interactive/background

2011-12-12 Thread HK
Hello,

  I've configured the batch option in w2web so that the jobs only 
start when at least one CPU is free. However, users can still choose 
interactive or background in the run_scf menu.

Is there a way to deactivate these two possibilities, or do I have to 
trust all users to patiently stand in line?

Thank you,

Holger