Re: [Yade-users] [Question #622060]: a problem about vtk

2017-04-18 Thread xjin
Question #622060 on Yade changed:
https://answers.launchpad.net/yade/+question/622060

Status: Answered => Solved

xjin confirmed that the question is solved:
Thanks Jan Stránský, that solved my question.

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622864]: import gmsh force element

2017-04-18 Thread Hien N.G. NGUYEN
Question #622864 on Yade changed:
https://answers.launchpad.net/yade/+question/622864

Hien N.G. NGUYEN proposed the following answer:
Hi,

For .ele format, you can find the manual of Tetgen [1], as far as I know, this 
format is not popular, at least in 3D community.
I have no idea about .inp but recently I work with .stl and Yade imported and 
worked just fine. Yade seems to support several mesh types [1]. You can try 
generating one of them from GMSH (try .gmsh), I believe it should work.

Other point, like Duriez said, the imported mesh can be 'marked' by its
ID, you can extract all data on it from its ID.

Good luck
Hien

[1] http://wias-berlin.de/software/tetgen/1.5/doc/manual/manual.pdf
[2] https://yade-dem.org/doc/yade.ymport.html?highlight=mesh

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622864]: import gmsh force element

2017-04-18 Thread Jérôme Duriez
Question #622864 on Yade changed:
https://answers.launchpad.net/yade/+question/622864

Status: Open => Answered

Jérôme Duriez proposed the following answer:
Hello,

1) Yes, this is correct (the order as well), see source code [1] to be sure. 
As a personal remark, note that such recording engines are probably less useful 
in YADE now that such kind of data can be easily accessed and saved through 
Python [2]. 
(Obviously, you may still use them though, if you're OK to spend time to know 
how these engines work)

3) The ForceRecorder is able to deal with several YADE bodies through its ids 
attribute [3], see also source code [1] to check that a cumulative value is 
stored.
Provided you know which (and how many) YADE bodies are created when you import 
this "mesh file", and that you correctly define this ids attribute, you should 
be able to do everything you want here.

Jerome

PS: I would recommend you open different Launchpad questions when you
have different questions, 2) being here quite distinct from 1)/3)

[1] 
https://github.com/yade/trunk/blob/e4e757f2e98a620e3177b7a36a1d10f69f6a6a28/pkg/dem/ForceTorqueRecorder.cpp#L14
[2] https://yade-dem.org/doc/tutorial-data-mining.html
[3] 
https://yade-dem.org/doc/yade.wrapper.html?highlight=forcerecorder#yade.wrapper.ForceRecorder.ids

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


[Yade-users] [Question #622864]: import gmsh force element

2017-04-18 Thread Justin
New question #622864 on Yade:
https://answers.launchpad.net/yade/+question/622864

I have a few of questions:

1.)  The ForceRecorder has four outputs (not including time). I assume, they 
are x,y,z, and total magnitude of force. Is that correct? In that order?


2.) The ymport can import tetrahedral meshes in .ele format. What program makes 
though files? I use gmsh and use .inp files. Can I import an .inp (tetrahedral) 
mesh file?


3.) If I do import a tetrahedral mesh file, would the ForceRecorder record and 
output the forces on all the elements in the file? Or only on the object as a 
whole? If not, is there a way to get an output of the forces on each element?

Thanks!

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #443228]: segmentation fault using two kinds of cohefricmats under cohesive triaxial test

2017-04-18 Thread Seti
Question #443228 on Yade changed:
https://answers.launchpad.net/yade/+question/443228

Seti requested more information:
Hi Jan,

I ran  script on Ubuntu 16.04 and had segmentation fault!!!


Regards,
Seti

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #443228]: segmentation fault using two kinds of cohefricmats under cohesive triaxial test

2017-04-18 Thread Seti
Question #443228 on Yade changed:
https://answers.launchpad.net/yade/+question/443228

Seti requested more information:
Hi Jan,

I ran  script on Ubuntu 16.04 and had segmentation fault!!!


Regards,
Seti

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #620981]: record deformed shape in cohesive triaxil test

2017-04-18 Thread Robert Caulk
Question #620981 on Yade changed:
https://answers.launchpad.net/yade/+question/620981

Status: Open => Answered

Robert Caulk proposed the following answer:
[1] https://github.com/yade/trunk/blob/master/doc/sphinx/user.rst
#rendering-interactions-as-force-chain

Also, if you search this forum for "force chain" you will find several
other answered questions describing how to visualize force chains.

Cheers,

Robert

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #620981]: record deformed shape in cohesive triaxil test

2017-04-18 Thread Seti
Question #620981 on Yade changed:
https://answers.launchpad.net/yade/+question/620981

Status: Answered => Open

Seti is still having a problem:
Hi Robert,

thanks for reply and sorry for not being specific.

I meant tracking the force chains in cohesive triaxial tests - Visual
observation in 3d Sample


Thanks,
Seti

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622060]: a problem about vtk

2017-04-18 Thread Jan Stránský
Question #622060 on Yade changed:
https://answers.launchpad.net/yade/+question/622060

Status: Open => Answered

Jan Stránský proposed the following answer:
Hello,

> O.run(5)

If you execute some code after O.run, use either
O.run(5,True)
or
O.run(5)
O.wait()
otherwise the commands are executed on running yade with uncertain (and most 
likely nonsense) results

> Cannot open file [strain.vtk]

is this part of output, or your question? I could not open strain.vtk
file (in paraview) with O.run(5), but could open it with O.run(5,True)

cheers
Jan

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622061]: the problem of yade installation

2017-04-18 Thread Manfred Hampl
Question #622061 on Yade changed:
https://answers.launchpad.net/yade/+question/622061

Status: Open => Answered

Manfred Hampl proposed the following answer:
This PPA doer not provide software for xenial.
Remove this ppa from your list of software sources, and the messages should 
disappear.

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622071]: a problem about micro-stress computing

2017-04-18 Thread xjin
Question #622071 on Yade changed:
https://answers.launchpad.net/yade/+question/622071

Status: Answered => Solved

xjin confirmed that the question is solved:
Thanks Jan Stránský, that solved my question.

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622071]: a problem about micro-stress computing

2017-04-18 Thread Jan Stránský
Question #622071 on Yade changed:
https://answers.launchpad.net/yade/+question/622071

Status: Open => Answered

Jan Stránský proposed the following answer:
The matrix is a matrix representation of stress tensor [1], so the values you 
get are
stress = (s_x, t_xy, t_xz,  t_yx, s_y, t_yz,  t_zx, t_zy, s_z)
s ... normal stress
t ... shear stress

cheers
Jan

[1] https://en.wikipedia.org/wiki/Cauchy_stress_tensor

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622060]: a problem about vtk

2017-04-18 Thread xjin
Question #622060 on Yade changed:
https://answers.launchpad.net/yade/+question/622060

Status: Answered => Open

xjin is still having a problem:
I use linux-system:ubuntu 16.04LTS (32-bit)

Yade version:

Welcome to Yade 2016.06a 
TCP python prompt on localhost:9001, auth cookie `dkusys'
XMLRPC info provider on http://localhost:21001
[[ ^L clears screen, ^U kills line. F12 controller, F11 3d view (use h-key for 
showing help), F10 both, F9 generator, F8 plot. ]]


However I use ubuntu in VMware Workstation10.0.4.

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622071]: a problem about micro-stress computing

2017-04-18 Thread xjin
Question #622071 on Yade changed:
https://answers.launchpad.net/yade/+question/622071

Status: Answered => Open

xjin is still having a problem:
Thanks Jan Stránský (honzik) very much!
And I compute:
--
stress=s[200]*4.*pi/3.*O.bodies[200].shape.radius**3/TW.volume(200)
--
Then I type: stress,
The  result is like this: 
---
Yade [19]:obtain stress
->  [19]: 
Matrix3(-0.13752527190640026,0.03607936010975411,0.0008634995770584191, 
0.03445913198778846,-0.06373525199754092,0.006348443944983994, 
-0.0012487034856438542,0.014427579541476804,-0.11692017375785213)

Can you explain the meanings of the values of the Matrix?
Thanks again!

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622060]: a problem about vtk

2017-04-18 Thread Jan Stránský
Question #622060 on Yade changed:
https://answers.launchpad.net/yade/+question/622060

Status: Open => Answered

Jan Stránský proposed the following answer:
Hello,
what system and version of Yade do you use?
thanks
Jan

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


Re: [Yade-users] [Question #622071]: a problem about micro-stress computing

2017-04-18 Thread Jan Stránský
Question #622071 on Yade changed:
https://answers.launchpad.net/yade/+question/622071

Status: Open => Answered

Jan Stránský proposed the following answer:
Hello,

> stress=s[100]**4

it is a typo, should be
stress=s[100]*4
with single * symbol

cheers
Jan

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp


[Yade-users] [Question #622071]: a problem about micro-stress computing

2017-04-18 Thread xjin
New question #622071 on Yade:
https://answers.launchpad.net/yade/+question/622071

I am trying to run a packing model,and try to use TesselationWrapper() to 
obtain the Micro-stress as the example given by YADE official website: 
https://www.yade-dem.org/doc/user.html#micro-stress-and-micro-strain.

My specific script is like tihs:
---
O.reset()
O.bodies.append(geom.facetBox((.5,.5,.5),(.5,.5,.5),wallMask=63))

from yade import pack
sp=pack.SpherePack()
sp.makeCloud((0,0,0),(1,1,1),rMean=0.02, rRelFuzz=0.1)
sp.toSimulation()


O.engines=[
   ForceResetter(),
   InsertionSortCollider([Bo1_Sphere_Aabb(),Bo1_Facet_Aabb()]),
   InteractionLoop(
  [Ig2_Sphere_Sphere_L3Geom(),Ig2_Facet_Sphere_L3Geom()],
  [Ip2_FrictMat_FrictMat_FrictPhys()],
  [Law2_L3Geom_FrictPhys_ElPerfPl()]
   ),
   NewtonIntegrator(gravity=(0,0,-19.81),damping=0.4),
   
]
O.dt=0.05*PWaveTimeStep()
--

Then I reset the Δt=5.0e-05。Then I type following script:

--
O.run(6343)
TW=TesselationWrapper()
TW.computeVolumes()
s=bodyStressTensors()
stress=s[100]**4.*pi/3.*O.bodies[100].shape.radius**3/TW.volume(100)
#These codes are written exactly as the YADE 
manualy(https://www.yade-dem.org/doc/user.html#micro-stress-and-micro-strain). 
--

I get message:

--
unsupported operand type(s) for ** or pow(): 'Matrix3' and 'float'
--
Can someone help me?Thanks very much!

-- 
You received this question notification because your team yade-users is
an answer contact for Yade.

___
Mailing list: https://launchpad.net/~yade-users
Post to : yade-users@lists.launchpad.net
Unsubscribe : https://launchpad.net/~yade-users
More help   : https://help.launchpad.net/ListHelp