Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-21 Thread Jan Stránský
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Jan Stránský posted a new comment:
Last line in python script can easily be just the beginning of simulation.
It depends how you use O.run, O.step, GUI play button...
As discussed, please open a new question for a new question.
cheers
Jan

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-21 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hi Jan,

thank you for your answer, I will do it next time.

The export command is at the last line, but it seems like gravity ist
not applied after saving the text file.

Let me know if I need to create a new thread.

Best wishes,
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-21 Thread Jan Stránský
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Jan Stránský posted a new comment:
> I have an additional question

next time or if you want to continue in this discussion, please open a
new question [1]

> I used this command: file = export.text('test.txt',mask=-1).

this export spheres at the time when python evaluates it. So probably
the line is "misplaced" in the code you are using.

cheers
Jan

[1] https://www.yade-dem.org/wiki/Howtoask

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-21 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hello,

I have an additional question about saving of simulation results. So I
generate spheres in a cube and then apply the gravity. How can I save
the positions of my spheres after applying the gravity. In the graphic
window I saw that the gravity was applied, but my saved text file gives
me only the positions of spheres before gravity applying.  I used
Oedometric test section of https://yade-dem.org/doc/tutorial-
examples.html. Can you please tell me how to save the position of
spheres after gravity in the given example code.

I used this command: file = export.text('test.txt',mask=-1).

Best wishes 
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-04 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
My mistake was in the dimension of my box an cylinder. The box was
smaller than cylinder and because of it the final figure looked like a
box, although it was actually a cylinder.

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-04 Thread Janek Kozicki
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Janek Kozicki requested more information:
You should at least tell others what was your mistake, in case if
someone stumbles on exact same problem. He will verify if your solution
(however irrelevant) helps him https://xkcd.com/979/

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-04 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hello Jan,

I have found my mistake and the last question is  not relevant any more
:)

Best regards,
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-12-04 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hello Jan,

I have one more question about saving the text file. I tried to do it,
but this command saves all spheres generated in the box. But I want to
save the positions only of spheres in my cylinder ('pred' in the code
above). The command that I usually use in python does not work here.
Should I  maybe change something in the 'mask' parameter in
yade.export.text(filename, mask=-1)?

Best regards
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-30 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Thanks a lot. I will try it

Best regards
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-30 Thread Jan Stránský
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Status: Needs information => Answered

Jan Stránský proposed the following answer:
Hi,

1) e.g. [1]

2) rRelFuzz is NOT taken into account if psdSizes is specified[2].
psdSizes makes the mode RDIST_PSD [3].
With this mode, rRelFuzz is not used [4]

cheers
Jan

[1] https://yade-dem.org/doc/yade.export.html#yade.export.text
[2] https://gitlab.com/yade-dev/trunk/-/blob/master/pkg/dem/SpherePack.cpp#L112
[3] https://gitlab.com/yade-dev/trunk/-/blob/master/pkg/dem/SpherePack.cpp#L177
[4] https://gitlab.com/yade-dev/trunk/-/blob/master/pkg/dem/SpherePack.cpp#L261

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-30 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hello Jerome,

sorry for the delay. My question was not about the saving of the state
of simulation, but about the saving of the positions of all generated
spheres as text data without running (3D)  simulation in the graphics
window. So I have the following Python code for packing spheres in
cylinder:

sp0=pack.SpherePack();
sp0.makeCloud((-20,-5,-20),(20,5,20),psdSizes=psdSizes,psdCumm=psdCumm, 
rRelFuzz=.65, distributeMass=False)
pred = pack.inCylinder((0,-5,0),(0,5,0),radius=25)
for c,r in sp0:
 if pred(c,r):
   O.bodies.append(sphere(c,r))

My questions are:

1. How can I save each positions and size of my spheres in cylinder as
text file?

2. If I write in makeCloud the values for psdSize and psdCumm, will an
additional parameter 'rRelFuzz' be taken into account? Or it will be
ignored because the particle distribution is known?

I hope you understand what I mean :)

Kind regards,
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-20 Thread Jérôme Duriez
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Jérôme Duriez posted a new comment:
Maybe I did not get your question. This being said

- saving the current state of a simulation in order to be able to
relaunch it after closing and reopening Yade is obtained using O.save:
https://yade-dem.org/doc/yade.wrapper.html#yade.wrapper.Omega.save

- inkoking Yade with yade* -n (where yade* = yade or yadedaily or ..)
cancels the call to Graphical User Interface

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-20 Thread Milly Ro
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Milly Ro posted a new comment:
Hello Jan,

thank you for your reply. The problem ist that I cannot get any results
(numbers) because of this error with OpenGL. The process of calculation
stops as soon as the simulation window cannot be open.

Best regards,
Milly

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Re: [Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-20 Thread Jan Stránský
Question #694102 on Yade changed:
https://answers.launchpad.net/yade/+question/694102

Status: Open => Needs information

Jan Stránský requested more information:
Hello,

what is the problem? saving result? running simulation itself? ... ?
As you said, normally you do not need the graphics for "crunching numbers"..
Can you test the scenario locally?

> P.S. I am working on Ubuntu 16.04.6 LTS (GNU/Linux 4.4.0-178-generic
x86_64) and my YADE version is 1.20.0.

consider updating both OS and Yade. Old version is not a problem for
general questions/problems, but might become a bigger problem for
specific problems, fixes etc.

cheers
Jan

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[Yade-users] [Question #694102]: Save the simulation result without OpenGL GLX

2020-11-20 Thread Milly Ro
New question #694102 on Yade:
https://answers.launchpad.net/yade/+question/694102

Hello,

I have the following question: how  can I save my simulation result (for 
examply for script pack_cloud.py from GitLab 
https://gitlab.com/yade-dev/trunk/-/blob/master/examples/test/pack-cloud.py but 
with my own particle distribution) without graphics drivers. It seems that the 
server I am usig for YADE does not have the necessary graphics driver, because 
I have got the error "OpenGL GLX extension not supported by display".  Since I 
do not have administrator rights, I cannot install anything myself. Actually I 
do not need the graphic representation of my simulation, but only the 
result/calculation.

P.S. I am working on Ubuntu 16.04.6 LTS (GNU/Linux 4.4.0-178-generic x86_64) 
and my YADE version is 1.20.0.

Best regards,
Milly

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