Scientists reported on Wednesday that they had taken a significant
step toward understanding the cause of schizophrenia, in a landmark
study that provides the first rigorously tested insight into the
biology behind any common psychiatric disorder.
http://www.nytimes.com/2016/01/28/health/schizophrenia-cause-synaptic-pruning-brain-psychiatry.html
More than two million Americans have a diagnosis of schizophrenia,
which is characterized by delusional thinking and hallucinations. The
drugs available to treat it blunt some of its symptoms but do not
touch the underlying cause.

The finding, published in the journal Nature, will not lead to new
treatments soon, experts said, nor to widely available testing for
individual risk. But the results provide researchers with their first
biological handle on an ancient disorder whose cause has confounded
modern science for generations. The finding also helps explain some
other mysteries, including why the disorder often begins in
adolescence or young adulthood.


“They did a phenomenal job,” said David B. Goldstein, a professor of
genetics at Columbia University who has been critical of previous
large-scale projects focused on the genetics of psychiatric disorders.
“This paper gives us a foothold, something we can work on, and that’s
what we’ve been looking for now, for a long, long time.

The researchers pieced together the steps by which genes can increase
a person’s risk of developing schizophrenia. That risk, they found, is
tied to a natural process called synaptic pruning, in which the brain
sheds weak or redundant connections between neurons as it matures.
During adolescence and early adulthood, this activity takes place
primarily in the section of the brain where thinking and planning
skills are centered, known as the prefrontal cortex. People who carry
genes that accelerate or intensify that pruning are at higher risk of
developing schizophrenia than those who do not, the new study
suggests.

Some researchers had suspected that the pruning must somehow go awry
in people with schizophrenia, because previous studies showed that
their prefrontal areas tended to have a diminished number of neural
connections, compared with those of unaffected people. The new paper
not only strongly supports that this is the case, but also describes
how the pruning probably goes wrong and why, and identifies the genes
responsible: People with schizophrenia have a gene variant that
apparently facilitates aggressive “tagging” of connections for
pruning, in effect accelerating the process.

Dr. Samuel Barondes, a professor of psychiatry at the University of
California, San Francisco, “but any step forward is not only rare and
unusual, it’s just one step in a journey of a thousand miles” to
improved treatments.

The study, by scientists from Harvard Medical School, Boston
Children’s Hospital and the Broad Institute, a research center allied
with Harvard and the Massachusetts Institute of Technology, provides a
showcase of biomedical investigation at its highest level. The
research team began by focusing on a location on the human genome, the
MHC, which was most strongly associated with schizophrenia in previous
genetic studies. On a bar graph — called a Manhattan plot because it
looks like a cluster of skyscrapers — the MHC looms highest.



“The MHC is the Freedom Tower” of the Manhattan plot, said Eric S.
Lander, the director of the Broad Institute. “The question was, what’s
in there?”

The area is a notoriously dark warren in the genome known to contain
genes that facilitate the body’s immune response, for example, by
flagging invading bacteria to be destroyed. That property had given
rise to speculation that schizophrenia might be a kind of autoimmune
condition, in which the body attacked its own cells.

But the research team, led by Steven McCarroll, an associate professor
of genetics at Harvard, and by Aswin Sekar, one of his graduate
students, found something different. Using advanced statistical
methods, the team found that the MHC locus contained four common
variants of a gene called C4, and that those variants produced two
kinds of proteins, C4-A and C4-B.

es of more than 64,000 people and found that people with schizophrenia
were more likely to have the overactive forms of C4-A than control
subjects. “C4-A seemed to be the gene driving risk for schizophrenia,”
Dr. McCarroll said, “but we had to be sure.”

The researchers turned to Beth Stevens, an assistant professor of
neurology at Boston Children’s Hospital and Harvard, who was an author
of a 2007 study showing that the products of MHC genes were involved
in synaptic pruning in normal developing brains. But how important was
this C4 protein, exactly? Very important, it turned out: Mice bred
without the genes that produce C4 showed clear signs that their
synaptic pruning had gone awry, Dr. Stevens’s lab found.

Taken together, Dr. Stevens said in an interview, “the evidence
strongly suggested that too much C4-A leads to inappropriate pruning
during this critical phase of development.”

In particular, the authors concluded, too much C4-A could mean too
much pruning — which would explain not only the thinner prefrontal
layers in schizophrenia, but also the reason that the disorder most
often shows itself in people’s teenage years or early twenties. “The
finding connects all these dots, all these disconnected observations
about schizophrenia, and makes them make sense,” Dr. McCarroll said.

Carrying a gene variant that facilitates aggressive pruning is hardly
enough to cause schizophrenia; far too many other factors are at work.
Having such a variant, Dr. McCarroll estimates, would increase a
person’s risk by about 25 percent over the 1 percent base rate of
schizophrenia — that is, to 1.25 percent. That is not nearly enough to
justify testing in the general population, even if further research
confirms the new findings and clarifies the roles of other associated
genes.

Yet the equation changes when it comes to young people who are at very
high risk of developing the disorder, because they are showing early
signs — a sudden slippage in mental acuity and memory, or even
internal “voices” that seem oddly real. This ominous period may last a
year or more, and often does not lead to full-blown schizophrenia. The
researchers hope that the at-risk genetic profile, once it has been
fleshed out more completely, will lead to the discovery of biomarkers
that could help clarify a prognosis in these people.

Developing a drug to slow or modulate pruning poses another kind of
challenge. If the new study shows anything, it is that synaptic
pruning is a delicate, exquisitely timed process, and that it is still
poorly understood. The team does not yet know, for example, why C4-A
leads to a different rate or kind of pruning than C4-B. Any medication
that tampered with that system would be a risky proposition, the
authors and outside experts agreed.

“We’re all very excited and proud of this work,” Dr. Lander said. “But
I’m not ready to call it a victory until we have something that can
help patients.”



A version of this article appears in print on January 28, 2016, on
page A1 of the New York edition with the headline: Scientists Home In
on Cause of Schizophrenia.

-- 
Avinash Shahi
Doctoral student at Centre for Law and Governance JNU


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