[aroma.affymetrix] Re: extractRawCopyNumbers question

Hi Henrik, Thanks for your reply, I have 3 more questions after reading your email: 1) I read through your instruction of total copy number analysis for 500k, there is no instruction on how to generate cesN object in "theta <- extractTheta(cesN, units=units, drop=TRUE)" you mentioned in

Re: annotationData over network using Windows Shortcuts *.lnk (Was: Re: [aroma.affymetrix] Re: How do you analyze Gene ST Data?)

Hi again, I take that patch back - it won't help you. Instead I went to the source and fixed affxparser. I've committed a bug fix to BioConductor - both to the release (now v1.14.1) and the developers versions (v1.15.1). You'll have to wait for the next BioC build cycle which should happen wit