[aroma.affymetrix] Re: exon array with technical replicates

2009-01-23 Thread Mark Robinson
Hi Sabrina. Thanks for digging into this. I had a quick look at that probeset (6824548) and everything seems alright to me. For example from the unix prompt, I get: unix88 516 % grep 6824548 MoEx-1_0-st-v1.na26.mm9.probeset.csv "4499490","chr14","-","51311295","51311393","4","6824548","268799"

[aroma.affymetrix] Re: exon array with technical replicates

2009-01-23 Thread sabrina
Hi, Mark: I did options, it gave me the exact display as what you showed to me.:) Here is some of my confusion: I checked the exFirma scores of these NAs to see what transcript_cluster_id they were assigned to so that I could check whether they do have >5000 probes assigned to it. One of them is