[aroma.affymetrix] Re: Discussion on affymetrix-defined-transcript-clusters

Hi. Check the page for the MoEx-1_0-st chip, it has CDF files you can download: http://groups.google.com/group/aroma-affymetrix/web/moex-1-0-st Cheers, Mark On 08/05/2009, at 11:35 PM, telos wrote: > > Hi, > > I'd like to run FIRMA on mouse Exon array data. For this, it seem that > I need sp

[aroma.affymetrix] Discussion on affymetrix-defined-transcript-clusters

Hi, I'd like to run FIRMA on mouse Exon array data. For this, it seem that I need special mouse Exon array CDF files... any advice on how I can get hold of them? Thanks --~--~-~--~~~---~--~~ When reporting problems on aroma.affymetrix, make sure 1) to run the lat

[aroma.affymetrix] Re: How to deal with RAW CEL file?

As stated on the startpage, aroma.affymetrix uses the affxparser for input/output of Affymetrix filetypes. This package (and hence aroma) should be able to read any kind of celfile, including your old text- file format. The function "convertCel" reads it definitely. Best, Mario. On Apr 21, 12:24