[aroma.affymetrix] Re: Mapping10K_Xba131 CDF

2009-07-06 Thread James F. Reid
Hi Michael, try from the dchip web server: http://chip.dfci.harvard.edu/biostat/cdf%20files/ HTH, J. mbaudis wrote: > Hi, > > it seems the Mapping10K_Xba131 supporting material isn't available > through the Affymetrix page anymore. Could somebody pls. be so kind as > to post a Mapping10K_Xba1

[aroma.affymetrix] Mapping10K_Xba131 CDF

2009-07-06 Thread mbaudis
Hi, it seems the Mapping10K_Xba131 supporting material isn't available through the Affymetrix page anymore. Could somebody pls. be so kind as to post a Mapping10K_Xba131.CDF file somewhere? Thanks, Michael Baudis. http://www.progenetix.net --~--~-~--~~~---~--~~

[aroma.affymetrix] Re: Calling enriched regions in tiling array experiments

2009-07-06 Thread Mark Robinson
Hi Lars. Apologies for the slow response. I do have some scripts for calling enriched regions, but they are not really ready for public consumption. And, they are geared more towards ChIP-chip of modified histones / DNA methylation than either TF binding or transcript expression. We have imple