Henrik:
That works!
Thanks,
Yupu
On Aug 17, 2:30 pm, Henrik Bengtsson
wrote:
> Hi,
>
> the aroma.affymetrix annotation files have an "na"-tag indication the
> NetAffx release/version, e.g.
>
> Mapping250K_Nsp,na26,HB20080915.ugp
>
> From this we know that data from the Affymetrix NetAffx rel
Henrik,
since it is fixed, and on a now running production machine, I don't
want to explore too much today. However, I recall that:
1. (definitely) aroma.core was not installed
2. (possibly) R.filesets were not installed, since (I think that) they
downloaded & installed after issuing hbLite("R.f
Thanks Mark,
sorry I wasn't clear. The hbLite() command will not install missing
CRAN/BioC packages, which is why you would expect an error if you
remove required CRAN packages such as digest. Those hbLite() commands
were only intended for troubleshooting Michael's setup.
Michael, also, after
Hi.
2009/8/17 ssv :
>
> Hi All
>
> I am analyzing 250k sty samples (only) (paired: healthy Vs tumor). No.
> of samples around 72 (36 each, paired). I am following the tutorial
> posted on
> http://groups.google.com/group/aroma-affymetrix/web/paired-total-copy-number-analysis.
> Till identificati
Dear Henrik and Mark,
digest didn't seem to be the problem; I got the same error after
installing it through BioC. However,
> hbLite("aroma.core");
> library("aroma.core");
did load the package. But running
hbInstall("aroma.affymetrix")
complained again about missing aroma.core:
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