[aroma.affymetrix] Question for custom CDF of ST-Array

2010-01-07 Thread rangerq
Hi, I use aroma.affymetrix to process Human Gene 1.0 ST Array. In the step of using custom cdf, I want to know that could I use the regular HuGene ST cdf from Affymetrix instead of the one provided at here? What are the different between unsupported cdf and the regular cdf? Could you explain what

[aroma.affymetrix] Re: a question about FIRMA score

2010-01-07 Thread camelbbs
Hi, can anyone help? Jiang On Jan 5, 9:47 am, camelbbs wrote: > HI, > I found the FIRMA scores are all >0, so what do you mean the > positive or negative? and i am not very understand this sentence "it > seems logical to find FIRMA scores that are different b/w your 2+ > groups". That if there ar