Hi,
my guess is that you've don't have the correct annotation data files.
For instance, could it be that you had to rename the UGP and UFL files
in order to get doCRMAv2() to run? What does the following give?
library("R.utils");
path <- "annotationData/chipTypes/GenomeWideSNP_5/";
path <- Argum
Hi Henrik,
> sm <- CbsModel(ds2);
> cesTuple <- getSetTuple(sm);
> refTuple <- getReferenceSetTuple(sm);
> array <- 1L;
> ceList <- getFileList(cesTuple, array);
> rfList <- getFileList(refTuple, array);
> print(ceList);
$GenomeWideSNP_5
AromaUnitTotalCnBinaryFile:
Name: KMU20080903GRT1
Tags: tota
