f the file that caused it not to work (the binary
> format
> > possibly causes NA values, creating the "missing value where TRUE/FALSE
> > needed" error), because as I said I've run this preprocessing step on my
> v3
> > data, using the same CDF, many tim
NA values, creating the "missing value where TRUE/FALSE
> needed" error), because as I said I've run this preprocessing step on my v3
> data, using the same CDF, many times with no problems before:
>
> 20141229 05:17:51|Background correcting data set...
> 20141229 05:17:
the binary format
possibly causes NA values, creating the "missing value where TRUE/FALSE
needed" error), because as I said I've run this preprocessing step on my v3
data, using the same CDF, many times with no problems before:
20141229 05:17:51|Background correcting data set...201
ll look into it. If the error only occurs with
ASCII CEL files, I'll add it to the to do list to troubleshoot.
Hope this helps
Henrik
> and I used apt-cel-convert provided by
> Affymetrix Power Tools for this conversion. There are several error messages
> that come up when I use RmaBa
ed apt-cel-convert provided by
Affymetrix Power Tools for this conversion. There are several error
messages that come up when I use RmaBackgroundCorrection() on the file,
some of which are:
20141229 20:59:04| Cannot create CEL file of version 4
(probeData/myData,RBC/HuEx-1_0-st-v2/EA_BT5
