Thanks very much Pierre.
Apologies for my confusing use of terminology. I do indeed mean that I
applied ASCRMA(v2) to each batch separately.
Regards,
Peter
On Tuesday, January 5, 2016 at 9:22:06 PM UTC+11, Pierre Neuvial wrote:
>
> Dear Peter,
>
> First, just to make sure we are talking abou
Dear Peter,
First, just to make sure we are talking about the same things, when
you write "I have applied ASCRMA to each array separately.", you mean
that you applied ASCRMA(v2) to each of the two *batches* separately,
right ? In the aroma-project world, we usually reserve the word
'array' for wh
Dear Group,
I have 28 samples of tumour normal pairs, run on 2 GenomeWideSNP6.0 arrays
several months apart. Some of the pairs have members on different chips (ie
tumor on one, normal on the other). I am not sure about the best way to
normalise the data such that these split pairs can be used f
