[aroma.affymetrix] Affy methylation tiling arrays - comparison of multiple groups

2013-03-04 Thread Andrew Beggs
Hi I have multiple Affy methylation tiling arrays, (i.e. _me and _in) arrays which have been sorted into functional groups, i.e. group 1 (cancer), group 2 (cancer) and group 3 (normal) I normally run Illumina arrays for methylation and so I'm not massively confident with this platform. I've

[aroma.affymetrix] Re: Affy methylation tiling arrays - comparison of multiple groups

2013-03-04 Thread Andrew Beggs
RCurl_1.95-3 Rsamtools_1.10.2 RSQLite_0.11.2 [13] rtracklayer_1.18.2 stats4_2.15.2 tools_2.15.2 XML_3.95-0.1 [17] zlibbioc_1.4.0 On Monday, March 4, 2013 3:24:13 PM UTC, Andrew Beggs wrote: Hi I have multiple Affy methylation tiling arrays, (i.e. _me and _in