Hi Henrik,
I've ran the entirety of the vignette up to the same point (I did
forget to run the fit(plm, verbose=verbose) and the same error
persists.
The reason I'm using version 1 is because all we need is the raw copy
number so we didn't need any of the additional tools/calculations.
traceback
Hi Henrik,
Yes that is correct, sorry again for the inconveniences.
Jack
On Jun 7, 12:12 pm, Henrik Bengtsson wrote:
> Hi Jack,
>
> from your new message '[aroma.affymetrix] Problem with Total Copy
> Number Vignette':
>
> On Mon, Jun 7, 2010 at 3:36 PM, Jack Yu wr
ocess.FragmentLengthNormalization(fln, verbose = verbose)
1: process(fln, verbose = verbose)
Thanks in advance,
Jack
--
Jack Y. Yu
Washington University in St.Louis
(505) 920-0701
--
When reporting problems on aroma.affymetrix, make sure 1) to run the latest
version of the package, 2) to repor
Hi all,
Let me preface this by saying I'm an introductory user when it comes
to R. I have a list of massive CEL files and I need to obtain the copy
numbers from them. The error message I've encountered when using the
vignette (http://www.aroma-project.org/vignettes/CRMAv1) is from the
function fit