Re: [aroma.affymetrix] CRMAv2 hangs during "process" function

2012-09-03 Thread CanadianJK
As so have for so many before me, your suggestion worked like a charm. I just started a fresh R session and the process ran smoothly (took a few days, but my word was it satisfying!). I cannot thank you enough for taking the time to help. Many many thanks, Jason Karamchandani On Sunday, Augus

Re: [aroma.affymetrix] CRMAv2 hangs during "process" function

2012-08-26 Thread Henrik Bengtsson
Hi, I'm not sure what is going on. It should certainly not get stuck for 14 hours, unless you're running out of RAM and you're swapping like crazy, but that should not happen if you have, say, at least 1GB of RAM. Are you doing this in a fresh R session? Where it seems to hang has nothing to do

[aroma.affymetrix] CRMAv2 hangs during "process" function

2012-08-21 Thread CanadianJK
I have been trying to perform copy number analysis of SNP6.0 data. I am unable to get past the "process" function, where R appears to hang (will not respond to interrupt) after displaying the following line during the verbose output from the process function call: 20120821 13:37:24|Readin