Ensembl-centric CDFs from scratch (Was: Re: [aroma.affymetrix] Error: cannot allocate vector of size 692.8 Mb)

2009-02-05 Thread Mark Robinson
Hi Sabrina. I created a new thread as this is a new question. And a big one! On 05/02/2009, at 6:06 AM, sabrina wrote: > Hi, Mark: > Quick question. I was looking at the example of creating cdfs from > scratch. I downloaded biomaRt , but not sure where to get or how to > create the exonBounda

[aroma.affymetrix] Error: cannot allocate vector of size 692.8 Mb

2009-01-27 Thread sabrina
Hi, all: I am using FIRMA model for my Mouse Exon array analysis. I am testing the FULL annotation. After I used FirmaModel and fit it, I used the following code to extract Firma Scores: exFirma<-extractDataFrame(firmaScore,addNames=TRUE); however, I got the following error: Error: cannot alloc