Hi Carol.
This throws an error because your CDF has a tag (r3) and there is no way
to send a tag for the CDF file through the AffymetrixCelSet$byName
function. I recommend that you just do this in 2 commands, as you've done
successfully. Alternatively, you can remove the ,r3 from your CDF file
Thanks Mark, I thought it might be something simple like that but just
couldn't troubleshoot it. The concept and use of tags is new to me.
By the way thanks, to everyone who has contributed to the user guide
and use cases (vignettes) for aroma.affymetrix, they are very useful!
Carol
On Oct 11,