Hi,
there is no explicit implementation for that in aroma.affymetrix.
The natural approach is to (i) identify the genomic locations for the
SNPs of interest, and (ii) given the location identify the chromosome
arm annotation "elsewhere".
To identify the genomic location, do:
cdf <- AffymetrixC
Hi Henrik,
The segments of a chromosome that are separated by the centromere;
e.g. 17p or 17q. Can I obtain this info for each SNP?
Thanks,
Matt
On Sep 17, 1:32 pm, "Henrik Bengtsson" <[EMAIL PROTECTED]> wrote:
> What do you mean by "chromosome arm information"?
>
> /Henrik
>
> On Wed, Sep 17,
What do you mean by "chromosome arm information"?
/Henrik
On Wed, Sep 17, 2008 at 10:25 AM, Matt <[EMAIL PROTECTED]> wrote:
>
> How can I extract the chromosome arm information for a set of units.
> Is there a get function that will do this?
>
> Thanks for any help,
> Matt
> >
>
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