Hi Vince.
Yes, getUniqueCdf() *should* inflate the dimensions of the original
CDF. Basically, it is rearranging the probesets so that individual
probes do not match to multiple probesets. To do this, it creates a
CDF with a higher dimension, copying the original physical location to
Hi,
I leave this one to Mark Robinson who is designed createUniqueCdf()
for AffymetrixCdfFile and is on top of this. Though, in the meanwhile
could you please:
1. Clarify the origin of Mm_PromPR_v02.CDF, because Affymetrix does
not provide an CDF.
2. Make the Mm_PromPR_v02.CDF available to us?
cdfU
AffymetrixCdfFile:
Path: annotationData/chipTypes/Mm_PromPR_v02
Filename: Mm_PromPR_v02,unique.CDF
Filesize: 126.33MB
Chip type: Mm_PromPR_v02,unique
RAM: 0.00MB
File format: v4 (binary; XDA)
Dimension: 3026x3026
Number of cells: 9156676
Number of units: 25373
Cells per unit: 360.88
Number
